Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os11t0137500-01
CDS Infomation

cds chromosome:IRGSP-1.0:11:1744099:1748824:1 gene:Os11g0137500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Transcription factor TFE/TFIIEalpha, HTH domain domain containing protein. (Os11t0137500-01)
Sequence

ATGGACACCATGGAGCAGTTAAATCGGTTGGTGAGGATGGTGGCGCGAGGATTCTATGAG
GACGTCTCGCTTGAGGAAGACCAGTCCAAACCCAACGGCAGCGGCAGCTGTGGGATTGTC
GTCGTCGTCCTCGATGCCCTCACCAGGCAACAGTGGGTCCGGGAGGAAGATTTAGCAAGA
AGTCTGATGATTCCATTCAACCGATTGCGTCAGATTACCCATTTTCTCGAACAGCAGAAA
TTAGTGAGAAGATACTATCGGAAGGAAGCAATACATGATGCAAGCATTTCAACTGCCTCA
CCCTCCCATGTTTCGCATGATGCCCATCTTGTTCCTACCAATGTAGCTGGGAAATTGAAG
ATGATCATGCAGCCCTACTGTTGCTTACACTATGGGCAGGTGTATGATGTCACACTGTAT
AGGATCCACGAGATGAAGAAGAAATTAAAGGATGAATTAGATGGAAACTACATGATTCAG
AACTATGTGTGCCCTAACTGTGAGAGGAGGTAG

Peptide Sequence

PEP ID

Os11t0137500-01
PEP Infomation

pep chromosome:IRGSP-1.0:11:1744099:1748824:1 gene:Os11g0137500 transcript:Os11t0137500-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Transcription factor TFE/TFIIEalpha, HTH domain domain containing protein. (Os11t0137500-01)
Sequence

MDTMEQLNRLVRMVARGFYEDVSLEEDQSKPNGSGSCGIVVVVLDALTRQQWVREEDLAR
SLMIPFNRLRQITHFLEQQKLVRRYYRKEAIHDASISTASPSHVSHDAHLVPTNVAGKLK
MIMQPYCCLHYGQVYDVTLYRIHEMKKKLKDELDGNYMIQNYVCPNCERR

Transcript Sequence

Transcript ID

Os11t0137500-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:11:1744099:1748824:1 gene:Os11g0137500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Transcription factor TFE/TFIIEalpha, HTH domain domain containing protein. (Os11t0137500-01)
Sequence

AGCCATTTTTCTCCTCGGTTTCTCCTCTCCTCAACTCAAGCCTCCGCGCCACGCTGCGCG
GCCGGCTAAAATCCTCCGCCGCTCGCCGCTCGCCGTCGTCCTCCGCCTCCGCCGCCATGG
ACACCATGGAGCAGTTAAATCGGTTGGTGAGGATGGTGGCGCGAGGATTCTATGAGGACG
TCTCGCTTGAGGAAGACCAGTCCAAACCCAACGGCAGCGGCAGCTGTGGGATTGTCGTCG
TCGTCCTCGATGCCCTCACCAGGCAACAGTGGGTCCGGGAGGAAGATTTAGCAAGAAGTC
TGATGATTCCATTCAACCGATTGCGTCAGATTACCCATTTTCTCGAACAGCAGAAATTAG
TGAGAAGATACTATCGGAAGGAAGCAATACATGATGCAAGCATTTCAACTGCCTCACCCT
CCCATGTTTCGCATGATGCCCATCTTGTTCCTACCAATGTAGCTGGGAAATTGAAGATGA
TCATGCAGCCCTACTGTTGCTTACACTATGGGCAGGTGTATGATGTCACACTGTATAGGA
TCCACGAGATGAAGAAGAAATTAAAGGATGAATTAGATGGAAACTACATGATTCAGAACT
ATGTGTGCCCTAACTGTGAGAGGAGGTAGTAAAGCTTAATTTTGATTGTTATATGGACAT
ATAGTACCACCTAAAAGATTTTAGCACAGCTGTCATTTCTGTGTTGAGCTGTAGGTATTC
ATCCCTCAATGCACTGGATCTTGTAAGCCATATTGATAACAATTTTCACTGCAAGCATTG
CAATGAAGAATTGAGTCAAGACTTTGGAGATCTTGCTTGGGGAGGAAGGGGGGGTGATGG
TGATAATGCCAGAAGAGACAGGCATGCAAAACTGAAAGATTTTCTGCAAAGAATGGAGGT
TGCTCCCTTTTTTGCAAGAAACAAACATTTGATTTTCTGCACATCAAATGTTAATGATGT
AATGCCAAAATTGTTCAACTTGTAGTAAAAAATATAAATTGTAATTACTTGAATAGCAAA
TGAACTTGTTTTTCAATGGTTTGTTTCCTTGTAATGAAAGGGCCTTCTCTTTTCAGAGAG
TGACTAAATTATTATGTCTGCATTCAGCAATAATCATTCTGTTATGCAGGAAATTGTGCA
TAAACTTTCAATAAATGTTTTTAATACATGAATATATGAGAAAGGACAACACTAGTGGGG
CATCTCTATACCTATTAAGAAATTTTGAAGATATTGGCTCGGTATTATTTTTGCCTGAAG
GTGCAGACTGAAAGGAAGTTCTATTCTTACTCTTGGATGTCCAAGTTTATACTTGTTCCA
ATCTTGATCATCTTGTGTTTTGCACTTCATTTGTATTACATATTTCTATTCTTTAATATT
ATTTGAATCTGTACTGATGCAGCATCAGATGGAGCGCCTAATATCACAATTGAACAAGGT
AAAAGATCTAGATTTTCCAGAGTTTCTGGCTTTGGAAACATGGGAGCGCAATATGAGAGA
ACCTGCAGGTGGTGATGATGTCAGCAGACCAATGCTCTTCCTTGGAGAGTCACATGAACA
TCAAAAAGGCAGTGCATCATGCATTGATGCCGATGAAGAGATTTTTGAATTTCGTGTGCA
AGATGCAAGACCGATACCTTCATTTGTCATTAGGAAAGATATCAACCATACGGAAGATAA
GGAAGAGCAGCTATGACAAATACAGGTAATGCATGTTAAAAAGATAGCACAGTTTGTTAA
AAGGATAGCACAAATGATGACACCAGTTAGGCTAGAATTAATCAATGTCAGTCTCCCCTA
ATTGAGTGAACTTTCCATACCAACATCTCAAGGTCTGTTTTTCCATTTTTACTCTCCACT
AGTTTCCATTAAGCATTCTTCATTTCAAGGCTAGAATTAATTCAGGCATGTTTCTCTGAC
CAACCATTTACTTCTCAAGCACAGCATGAGCGGCAATTTGGTGCCAAGTGGAAACGGGAT
GATAATGATGCATGTATGCTTTGATGAGAGTGACCTAGTGTAGCACTTACAAGTATTTCA
ACTGAGCTTAAATACTTGAGTTCAGCCAAAAGCTTTGTTCCGACCTGTGTCTGGAGATGA
GTCCATTAATAAATACACCATACAAATTAAATCTACTTCCACATTTAACGTTGTAGCTGT
AGTCTCCTTCTTTCTTGATGTTTCTAAACTCCTAGTTATCTAATTGCATGTCCTTTTGTC
TTAGTATAATAGAAAAAGAAACATGGTCTGGTACTTTTCCTGTCTTGTAAATGATATTAC
CACCATATTTACTTGCAGTTCAGTTAGCCACTGAAATGATCTGATCTGTATGAATTCCAT
GATGAGTTATAGAACGTTTGTAACTGAAATTTAATAGATGGGGGTATATCTTATGTTCTT
AACATGTTGCCTTTGACTGATGTATCATAAATGTGTTGGGCATGGATCTAACATATTTAA
ACTAATACAGGGAACAAGCTTGAGAGATGTGCTATATATGCGAACAAGCAGACTAGAATT
TTGAGACCCAAGCGTGATCAGATGGTGATGAAGACTTTATAGATGGTGATGATATAGATA
TGTAAATCATGTAAATACGAATTTTGCCCTTTCTGCCTTTCTTTTTTTTTTCGAGACAAA
GCCATTTCTGCGTTTTCGCCTTATGTGTCTATAAAAGAACTTACATTCGT