Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os11t0137300-01
CDS Infomation	cds chromosome:IRGSP-1.0:11:1723822:1735147:-1 gene:Os11g0137300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Armadillo-type fold domain containing protein. (Os11t0137300-01);Similar to HEAT repeat family protein, expressed. (Os11t0137300-02)
Sequence	ATGGCGGAGACATCGTCGGCGGCGGCGGCGGCGCAGACCGACGCGGAGAGGGAGGAGGCG CTGGACCGGATGCTGACGCGGCTGGCCCTCGCCGAAGACGCGCGGCTCGCGCCGCTGCTC GCCCGCGTCCTCCCCTACGCCATCACCTCGCTCGCCTCCGCCACCGCATCCGTCCGCAAG CTCGTTATGGAAATTCTCAGCCACATTAACAAACGGGTGAAGCACAGGCCTGAGATTTCA CTGCCCATGCTGGATTTATGGAGGATTTATACTGAATCTACTTCCTCCACAATAGTCCGG AATTTTTGCATTGTTTATATTGAGATGGCATTTGAACGTCTGCTAAGTGAGGACAAGGGA AGCATAGCACCTGATCTTTTAATCAACATATCAAATGTTACAGAGCAGCATCAGGGAATC ATCTTGAGACTTGTGGTGAAGGCTATTGGTGAATGTAACACACATAAGGTGGGTGACAAT GTTGCTTCAAAATATCAATCCATAAGTGGATCTAATGATGGTCTAGTCTTCGCTGACTTC TGTTTTCACACAGTACTGTATCAAACACCACCTCAAGGTGTTGGATGCCCGGCAGGACTT TCGGTTGCTCAATCAGATCGTGTTACTGGAAAGCAGCCACTAAAAGGTGACACACTTACA TCAAGAAAGCTAGGAATCTTGAACGTCATTGAAGCTATGCAGTTGGCACCAGAGATTGTT TACCCTCTTTATTTAGCTGCTGCTTCAGATAGTCAAGAGTCAGTTACTAAGAGAGGAGAG GAGTTATTAAAGCGCAAAGCTTCAGCTGTGAACCTAGAAGATTCCAACCTTATGAAGAAA CTGTTCACACTATTCAATGGTACTGCAAGTCCAGAAAATATAGCTGCAGAGCTGAAAGTC GCCCCAGCACATAGTTCACTGCGAGTCCGCCTTATGGGTGTTTTCTGCCGATCGATTGCT GCAGCAAACGCATTCCCGTACACACTTCAGTGCATCTTTGGCTGCATCTATGGAAACGGG ACTACTTCAAGGCTGAAGCAGTTAGGGATGGAGTTCACTGTCTGGGTTTTCAAACATGCA GCAAATGACCAGCTAAAGTTAATTGGTCCAGTCATTCTCAGTGGAATATTACGTTCACTT GATGGTTCTTCCACTACTGAAGCAGATTCTTCCAGTAGGGATATTAAAATATTTGCCTAC CAGGCAATTGGTTTGCTTGCCACTCGCATGCCTAATTTATTCAGCAACAAAACTGACATG GCTATACGACTCTTTACTGCTTTAAGATTAGAGGAGCAATCTCTTCGTTTGACAATTCAG GAGGCAGCTACTGCCCTTGCTACAGCATACAAGGGTGCTTCGGTTGTAATATTGAAGGAT ATTGAGGCACTTCTTTTGGAAAATTCTCAAATGGAGCAAAGTGAGGTCCGATTTTCTGCT GTAAGATGGGCAACAACACTATACGATATGAAGCACTGCCCAAGCCGATACATTTGCATG CTTGGTGCTTCAGATGTAAAACTGGACATAAGGGAAATGGCTTTAACTGGTCTGAATCTG TTAAATGATGAAAGGGAGTCATTTGCAATAGCAACTGATTCCAACTATCCTGATATTGCA GACATGGTAAATTATGTATACAGCCAACAGCCTCAGTTGCTACACTGTGATGAGCAGAGG AACGGAAAATTGCTTTTCCCAACAAAAACATTTCTTGCAATGATAAAGTTTCTAATGAAG TGCTTTCAGAAAAGTGATGGCTCGGATTTTCTTCAAGAAGATCTATCTAATTGTCCAGTA TCAAAATTGTGTATCATTTTAGAACATGCCATGTCATATGAAGGATCTAGTGAACTTCAT GCATTGGCCTTGAAGTCATTGGTCGATATTTCCTCTCGTCAACCAAAGTTGGTGTCATCG CGCTATGTGAACCGTTTACTTTGGCTAAGAACTTTACTGGGCCATGTTGATGCTGATGCT CGTGAAGCAACTTCACGTCTGCTTGGTATTACTTCTTCAGCCCTTTCAAGCACTGCTGCA CTGGATCTTCTCTCTGAGCTCACTTCAACATTTGATCAAAATCGCCCATCAAGATTCGAA AATTACCATGGATTGTTATGTGCAATTGGGTATATAACTGCTGGTTGTTTAAAGGAATCT TATATAACTGAAGAAATAGTGCAGAAATCAATTGATGTTCTTGTAAAAGTTGTCGAGTCT GAGGGTTCAGCATTGGCATCCACTGCGATGGAAGCTCTTGGTCATATTGGTCTCCATTGT TTATTGCCTTCTATTAATCGAAATTCCTCTCAAGCTGCACTTTTAACAATCCTGAATGAG AAGCTGGCTAAGCTGCTTTCAGAAAATGATACTAAAGCTATACAAAAGATTTTGATATCG CTGGGACACCTATCTTGGAACGAGTTGTCATTTGCACACCTGAATAATGCATTGGACTTA ATTTTTAGTCTTTCACGCTCTAAGGTGGAAGAAGTTCTTTTTGCAGCCGGGGAGGCCCTA TCTTTTATATGGGGGGAAGTTCCTGTGACCACAGATGTAATACTAGAAACGAACTTTGTC TCCCTTTCCCAGGCCACAAACTATCTTACTGGTGATGCACCCGTACTTGTCTCGAGTAAC TCTAATAAAGGAAGTGATTGTGAAGAAGCACACGCAATGGCTCGAGAAGAAATTATAAAA CGGTTATTTGATACATTAATTTATAGCAGTAGAAAAGAGGAAAGGTGCGCAGGTACTGTC TGGTTGGTCTCACTTACAATGTACTGTGGTCAGCATCCAAAGATCCTGGAACTACTTCCA CAAATTCAGGAAGCCCTTACCCACCTTCTTGGTGATCAGAATGATCTTACACAAGATCTG GCATCCCAAGGCATGAGTATTGTATATGAGCTTGGTGATGCATCTATGAAGGAGCAGCTG GTTCATGCTCTTGTGAATACACTGTCTGGCGCAGCAAAAAAGAAAAGGGCCATCAAGCTG ATGGAGGATTCAGAGGTTTTTCAAGAAGGAACTATTGGCAATAATCCTACTGGAGGAAAG CTTAGCACATACAAGGAACTTTGTAGCCTTGCCAACGAGATGGGCCAACCTGACTTAATA TACAAGTTTATGGATCTAGCTAACTATCAGGCTGCTATCAATTCCAAGAGGGGTGCTGCT TTTGGGTTTTCCAAGATAGCCAAGCAAGCTGGTGAGGCACTTCAGCCTCATCTGCATACC TTAATTCCCAGGCTTGTCCGTTACCAATATGATCCTGATAAGAACATCCAGGATTCTATG GCACACATATGGAAATTAATTGTTGCAGATCC

Peptide Sequence

PEP ID	Os11t0137300-01
PEP Infomation	pep chromosome:IRGSP-1.0:11:1723822:1735147:-1 gene:Os11g0137300 transcript:Os11t0137300-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Armadillo-type fold domain containing protein. (Os11t0137300-01);Similar to HEAT repeat family protein, expressed. (Os11t0137300-02)
Sequence	MAETSSAAAAAQTDAEREEALDRMLTRLALAEDARLAPLLARVLPYAITSLASATASVRK LVMEILSHINKRVKHRPEISLPMLDLWRIYTESTSSTIVRNFCIVYIEMAFERLLSEDKG SIAPDLLINISNVTEQHQGIILRLVVKAIGECNTHKVGDNVASKYQSISGSNDGLVFADF CFHTVLYQTPPQGVGCPAGLSVAQSDRVTGKQPLKGDTLTSRKLGILNVIEAMQLAPEIV YPLYLAAASDSQESVTKRGEELLKRKASAVNLEDSNLMKKLFTLFNGTASPENIAAELKV APAHSSLRVRLMGVFCRSIAAANAFPYTLQCIFGCIYGNGTTSRLKQLGMEFTVWVFKHA ANDQLKLIGPVILSGILRSLDGSSTTEADSSSRDIKIFAYQAIGLLATRMPNLFSNKTDM AIRLFTALRLEEQSLRLTIQEAATALATAYKGASVVILKDIEALLLENSQMEQSEVRFSA VRWATTLYDMKHCPSRYICMLGASDVKLDIREMALTGLNLLNDERESFAIATDSNYPDIA DMVNYVYSQQPQLLHCDEQRNGKLLFPTKTFLAMIKFLMKCFQKSDGSDFLQEDLSNCPV SKLCIILEHAMSYEGSSELHALALKSLVDISSRQPKLVSSRYVNRLLWLRTLLGHVDADA REATSRLLGITSSALSSTAALDLLSELTSTFDQNRPSRFENYHGLLCAIGYITAGCLKES YITEEIVQKSIDVLVKVVESEGSALASTAMEALGHIGLHCLLPSINRNSSQAALLTILNE KLAKLLSENDTKAIQKILISLGHLSWNELSFAHLNNALDLIFSLSRSKVEEVLFAAGEAL SFIWGEVPVTTDVILETNFVSLSQATNYLTGDAPVLVSSNSNKGSDCEEAHAMAREEIIK RLFDTLIYSSRKEERCAGTVWLVSLTMYCGQHPKILELLPQIQEALTHLLGDQNDLTQDL ASQGMSIVYELGDASMKEQLVHALVNTLSGAAKKKRAIKLMEDSEVFQEGTIGNNPTGGK LSTYKELCSLANEMGQPDLIYKFMDLANYQAAINSKRGAAFGFSKIAKQAGEALQPHLHT LIPRLVRYQYDPDKNIQDSMAHIWKLIVAD

Transcript Sequence

Transcript ID	Os11t0137300-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:11:1723822:1735147:-1 gene:Os11g0137300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Armadillo-type fold domain containing protein. (Os11t0137300-01);Similar to HEAT repeat family protein, expressed. (Os11t0137300-02)
Sequence	TTTTCTTCTTCTCACCTTCTTGCGGTGGAAGGAAACACGGGCGACTGAGCAGCTGAGTCC AACATCGCCGGGAGAGAGATGGCGGAGACATCGTCGGCGGCGGCGGCGGCGCAGACCGAC GCGGAGAGGGAGGAGGCGCTGGACCGGATGCTGACGCGGCTGGCCCTCGCCGAAGACGCG CGGCTCGCGCCGCTGCTCGCCCGCGTCCTCCCCTACGCCATCACCTCGCTCGCCTCCGCC ACCGCATCCGTCCGCAAGCTCGTTATGGAAATTCTCAGCCACATTAACAAACGGGTGAAG CACAGGCCTGAGATTTCACTGCCCATGCTGGATTTATGGAGGATTTATACTGAATCTACT TCCTCCACAATAGTCCGGAATTTTTGCATTGTTTATATTGAGATGGCATTTGAACGTCTG CTAAGTGAGGACAAGGGAAGCATAGCACCTGATCTTTTAATCAACATATCAAATGTTACA GAGCAGCATCAGGGAATCATCTTGAGACTTGTGGTGAAGGCTATTGGTGAATGTAACACA CATAAGGTGGGTGACAATGTTGCTTCAAAATATCAATCCATAAGTGGATCTAATGATGGT CTAGTCTTCGCTGACTTCTGTTTTCACACAGTACTGTATCAAACACCACCTCAAGGTGTT GGATGCCCGGCAGGACTTTCGGTTGCTCAATCAGATCGTGTTACTGGAAAGCAGCCACTA AAAGGTGACACACTTACATCAAGAAAGCTAGGAATCTTGAACGTCATTGAAGCTATGCAG TTGGCACCAGAGATTGTTTACCCTCTTTATTTAGCTGCTGCTTCAGATAGTCAAGAGTCA GTTACTAAGAGAGGAGAGGAGTTATTAAAGCGCAAAGCTTCAGCTGTGAACCTAGAAGAT TCCAACCTTATGAAGAAACTGTTCACACTATTCAATGGTACTGCAAGTCCAGAAAATATA GCTGCAGAGCTGAAAGTCGCCCCAGCACATAGTTCACTGCGAGTCCGCCTTATGGGTGTT TTCTGCCGATCGATTGCTGCAGCAAACGCATTCCCGTACACACTTCAGTGCATCTTTGGC TGCATCTATGGAAACGGGACTACTTCAAGGCTGAAGCAGTTAGGGATGGAGTTCACTGTC TGGGTTTTCAAACATGCAGCAAATGACCAGCTAAAGTTAATTGGTCCAGTCATTCTCAGT GGAATATTACGTTCACTTGATGGTTCTTCCACTACTGAAGCAGATTCTTCCAGTAGGGAT ATTAAAATATTTGCCTACCAGGCAATTGGTTTGCTTGCCACTCGCATGCCTAATTTATTC AGCAACAAAACTGACATGGCTATACGACTCTTTACTGCTTTAAGATTAGAGGAGCAATCT CTTCGTTTGACAATTCAGGAGGCAGCTACTGCCCTTGCTACAGCATACAAGGGTGCTTCG GTTGTAATATTGAAGGATATTGAGGCACTTCTTTTGGAAAATTCTCAAATGGAGCAAAGT GAGGTCCGATTTTCTGCTGTAAGATGGGCAACAACACTATACGATATGAAGCACTGCCCA AGCCGATACATTTGCATGCTTGGTGCTTCAGATGTAAAACTGGACATAAGGGAAATGGCT TTAACTGGTCTGAATCTGTTAAATGATGAAAGGGAGTCATTTGCAATAGCAACTGATTCC AACTATCCTGATATTGCAGACATGGTAAATTATGTATACAGCCAACAGCCTCAGTTGCTA CACTGTGATGAGCAGAGGAACGGAAAATTGCTTTTCCCAACAAAAACATTTCTTGCAATG ATAAAGTTTCTAATGAAGTGCTTTCAGAAAAGTGATGGCTCGGATTTTCTTCAAGAAGAT CTATCTAATTGTCCAGTATCAAAATTGTGTATCATTTTAGAACATGCCATGTCATATGAA GGATCTAGTGAACTTCATGCATTGGCCTTGAAGTCATTGGTCGATATTTCCTCTCGTCAA CCAAAGTTGGTGTCATCGCGCTATGTGAACCGTTTACTTTGGCTAAGAACTTTACTGGGC CATGTTGATGCTGATGCTCGTGAAGCAACTTCACGTCTGCTTGGTATTACTTCTTCAGCC CTTTCAAGCACTGCTGCACTGGATCTTCTCTCTGAGCTCACTTCAACATTTGATCAAAAT CGCCCATCAAGATTCGAAAATTACCATGGATTGTTATGTGCAATTGGGTATATAACTGCT GGTTGTTTAAAGGAATCTTATATAACTGAAGAAATAGTGCAGAAATCAATTGATGTTCTT GTAAAAGTTGTCGAGTCTGAGGGTTCAGCATTGGCATCCACTGCGATGGAAGCTCTTGGT CATATTGGTCTCCATTGTTTATTGCCTTCTATTAATCGAAATTCCTCTCAAGCTGCACTT TTAACAATCCTGAATGAGAAGCTGGCTAAGCTGCTTTCAGAAAATGATACTAAAGCTATA CAAAAGATTTTGATATCGCTGGGACACCTATCTTGGAACGAGTTGTCATTTGCACACCTG AATAATGCATTGGACTTAATTTTTAGTCTTTCACGCTCTAAGGTGGAAGAAGTTCTTTTT GCAGCCGGGGAGGCCCTATCTTTTATATGGGGGGAAGTTCCTGTGACCACAGATGTAATA CTAGAAACGAACTTTGTCTCCCTTTCCCAGGCCACAAACTATCTTACTGGTGATGCACCC GTACTTGTCTCGAGTAACTCTAATAAAGGAAGTGATTGTGAAGAAGCACACGCAATGGCT CGAGAAGAAATTATAAAACGGTTATTTGATACATTAATTTATAGCAGTAGAAAAGAGGAA AGGTGCGCAGGTACTGTCTGGTTGGTCTCACTTACAATGTACTGTGGTCAGCATCCAAAG ATCCTGGAACTACTTCCACAAATTCAGGAAGCCCTTACCCACCTTCTTGGTGATCAGAAT GATCTTACACAAGATCTGGCATCCCAAGGCATGAGTATTGTATATGAGCTTGGTGATGCA TCTATGAAGGAGCAGCTGGTTCATGCTCTTGTGAATACACTGTCTGGCGCAGCAAAAAAG AAAAGGGCCATCAAGCTGATGGAGGATTCAGAGGTTTTTCAAGAAGGAACTATTGGCAAT AATCCTACTGGAGGAAAGCTTAGCACATACAAGGAACTTTGTAGCCTTGCCAACGAGATG GGCCAACCTGACTTAATATACAAGTTTATGGATCTAGCTAACTATCAGGCTGCTATCAAT TCCAAGAGGGGTGCTGCTTTTGGGTTTTCCAAGATAGCCAAGCAAGCTGGTGAGGCACTT CAGCCTCATCTGCATACCTTAATTCCCAGGCTTGTCCGTTACCAATATGATCCTGATAAG AACATCCAGGATTCTATGGCACACATATGGAAATTAATTGTTGCAGATCC