Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os11t0137100-01
CDS Infomation

cds chromosome:IRGSP-1.0:11:1707728:1712884:-1 gene:Os11g0137100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to predicted protein. (Os11t0137100-01)
Sequence

ATGGCGATGGATTTGGACGAGCCGCTCGACGCGGAGAAGGGCGAGGCGGCGCTGCGGCGG
CTGCGCGACGCCGACCCGGCCCTCTACCTCTCCCCCTCCGCCGACCTCGCCGCCGCCGCC
CGTGAGGCCTCCAAGCACCTCTACGCCTCGCTCGTCCCCTTCTCCCCCGCGCAGCCGCCC
CCGCTCTCCAACCTCCTCGCAGGCCCCGCCTTCGACGCCGAGCAGATTTGGTCCCAGATT
GAGCTGCTCTCCCGCCCTCTCATCCCCCACCTGCGCCGCCAGCTCCGCCGCCTCGAGCAG
CAACCCCCGTCTCAGCCGCCGCCTCGTACGGAATCGAAGTCCGCTGATGCCGAAGAGAAG
TCAGAGGAGGAGGAGGATGGTGAAGGTGACGAAGAATTGGAGGAGTTGGACGATGTAGAT
GATGAAGAGGAATCAGAGGAGGAGGAAAAGGAAGAATTAGGATTGGAGGGTGAAGCAGGG
AATGAAGTGGAGGACGAGTTCTTCAAGATAAAGGATCTCGATAAGTTCATGGTAAAGGGG
GAGGAGGCGGAATATGGTGGGGGTGCCAAGCAAGGGAAGAAGAAGAAGAAAACAGAGAAC
TGGATGGAAGAAGATAGTGATTCGGAGGACGAGGAGTATCTTGATGAGGATGAAGAAGAT
GACGATGAGCACTTGGATTTGGAAGACTTCGACGATGAAGAAGAAGAAGAAGAGGGTGCA
GTTGGAGATATAATGTATAAGGATTTTTTTCAGGAAGCGGATGACCAAAAAGTAAGGAAG
AAAGGTGGCTCCAAGAAAGTTCAATTCAAGGATGAACCAGATAAACCAGAAGTTGATGAC
AAAAATGATGATGGAAATGATGAACAGGGTTTGTCAACTCACGAGAAGGCGCGCCTGAAG
ATGCATGCTAAAATAGAGGAAATGGAGAAAGCTAATCTTGAACCTAGTACGTGGACCATG
CAGGGAGAGGTTAATGCTTCCAGCAGACCCAAAAATAGTGCTCTAGAAGTGGACCTTGAT
TTTGAGCACAATGTAAGACCTGCCCCAGTAATCACTGAGGAAGTCACTGCTTCTCTTGAA
GAGATGATAAAGAAAAGAATAATAGAGGGTCATTTTGACGATGTTGAAAAGCCTTCTCCC
TTGCAATTTAAATCCCCAAAGGAACAAAAGGATCTGGATGAAAGTAAGAGCAAGAAGGGT
CTTGCTGAACTATATGAGGATGATTATGCGCAAAAAGCTGGCCTTGCACCTGCACCACTT
TCTATTTCAGATGAACTTAAGAACGAGGCAAAGACCTTATTTAAGAGAATATGCTTGAAG
TTGGATGCACTATCTCATTTCCACTTTGCTCCAAAGCCGGTCATTGAAGATATGTCTATA
CAAGCAAATGTACCAGCTCTAGCAATGGAGGAGATTGCACCTGTAGCTGTTTCAGATGCT
GCAATGCTTGCTCCTGAAGAAATTTTTGAAGGAAAAGGTGATGTTAAAGAAGAAGCAGAA
CTTACACAAGCTGAGCGCAAAAGAAGAAGAGCTAACAAGAAAAGGAGATATGCAGGATCG
CATAAGGAGAGGCCAGCCAAGATGCAGAAAGATTAA

Peptide Sequence

PEP ID

Os11t0137100-01
PEP Infomation

pep chromosome:IRGSP-1.0:11:1707728:1712884:-1 gene:Os11g0137100 transcript:Os11t0137100-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to predicted protein. (Os11t0137100-01)
Sequence

MAMDLDEPLDAEKGEAALRRLRDADPALYLSPSADLAAAAREASKHLYASLVPFSPAQPP
PLSNLLAGPAFDAEQIWSQIELLSRPLIPHLRRQLRRLEQQPPSQPPPRTESKSADAEEK
SEEEEDGEGDEELEELDDVDDEEESEEEEKEELGLEGEAGNEVEDEFFKIKDLDKFMVKG
EEAEYGGGAKQGKKKKKTENWMEEDSDSEDEEYLDEDEEDDDEHLDLEDFDDEEEEEEGA
VGDIMYKDFFQEADDQKVRKKGGSKKVQFKDEPDKPEVDDKNDDGNDEQGLSTHEKARLK
MHAKIEEMEKANLEPSTWTMQGEVNASSRPKNSALEVDLDFEHNVRPAPVITEEVTASLE
EMIKKRIIEGHFDDVEKPSPLQFKSPKEQKDLDESKSKKGLAELYEDDYAQKAGLAPAPL
SISDELKNEAKTLFKRICLKLDALSHFHFAPKPVIEDMSIQANVPALAMEEIAPVAVSDA
AMLAPEEIFEGKGDVKEEAELTQAERKRRRANKKRRYAGSHKERPAKMQKD

Transcript Sequence

Transcript ID

Os11t0137100-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:11:1707728:1712884:-1 gene:Os11g0137100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to predicted protein. (Os11t0137100-01)
Sequence

GATTTCCTCCTTTCAGTGAAGTGTTAAACCCTAGCTAGCCCCTCTTCTCCGCTCTGCCTC
CTCTCCTCCCCCATCCCCTCTCCGCCGTCTCAACCTCCGCCGATTCTTCCCACCCAGCAA
TGGCGATGGATTTGGACGAGCCGCTCGACGCGGAGAAGGGCGAGGCGGCGCTGCGGCGGC
TGCGCGACGCCGACCCGGCCCTCTACCTCTCCCCCTCCGCCGACCTCGCCGCCGCCGCCC
GTGAGGCCTCCAAGCACCTCTACGCCTCGCTCGTCCCCTTCTCCCCCGCGCAGCCGCCCC
CGCTCTCCAACCTCCTCGCAGGCCCCGCCTTCGACGCCGAGCAGATTTGGTCCCAGATTG
AGCTGCTCTCCCGCCCTCTCATCCCCCACCTGCGCCGCCAGCTCCGCCGCCTCGAGCAGC
AACCCCCGTCTCAGCCGCCGCCTCGTACGGAATCGAAGTCCGCTGATGCCGAAGAGAAGT
CAGAGGAGGAGGAGGATGGTGAAGGTGACGAAGAATTGGAGGAGTTGGACGATGTAGATG
ATGAAGAGGAATCAGAGGAGGAGGAAAAGGAAGAATTAGGATTGGAGGGTGAAGCAGGGA
ATGAAGTGGAGGACGAGTTCTTCAAGATAAAGGATCTCGATAAGTTCATGGTAAAGGGGG
AGGAGGCGGAATATGGTGGGGGTGCCAAGCAAGGGAAGAAGAAGAAGAAAACAGAGAACT
GGATGGAAGAAGATAGTGATTCGGAGGACGAGGAGTATCTTGATGAGGATGAAGAAGATG
ACGATGAGCACTTGGATTTGGAAGACTTCGACGATGAAGAAGAAGAAGAAGAGGGTGCAG
TTGGAGATATAATGTATAAGGATTTTTTTCAGGAAGCGGATGACCAAAAAGTAAGGAAGA
AAGGTGGCTCCAAGAAAGTTCAATTCAAGGATGAACCAGATAAACCAGAAGTTGATGACA
AAAATGATGATGGAAATGATGAACAGGGTTTGTCAACTCACGAGAAGGCGCGCCTGAAGA
TGCATGCTAAAATAGAGGAAATGGAGAAAGCTAATCTTGAACCTAGTACGTGGACCATGC
AGGGAGAGGTTAATGCTTCCAGCAGACCCAAAAATAGTGCTCTAGAAGTGGACCTTGATT
TTGAGCACAATGTAAGACCTGCCCCAGTAATCACTGAGGAAGTCACTGCTTCTCTTGAAG
AGATGATAAAGAAAAGAATAATAGAGGGTCATTTTGACGATGTTGAAAAGCCTTCTCCCT
TGCAATTTAAATCCCCAAAGGAACAAAAGGATCTGGATGAAAGTAAGAGCAAGAAGGGTC
TTGCTGAACTATATGAGGATGATTATGCGCAAAAAGCTGGCCTTGCACCTGCACCACTTT
CTATTTCAGATGAACTTAAGAACGAGGCAAAGACCTTATTTAAGAGAATATGCTTGAAGT
TGGATGCACTATCTCATTTCCACTTTGCTCCAAAGCCGGTCATTGAAGATATGTCTATAC
AAGCAAATGTACCAGCTCTAGCAATGGAGGAGATTGCACCTGTAGCTGTTTCAGATGCTG
CAATGCTTGCTCCTGAAGAAATTTTTGAAGGAAAAGGTGATGTTAAAGAAGAAGCAGAAC
TTACACAAGCTGAGCGCAAAAGAAGAAGAGCTAACAAGAAAAGGAGATATGCAGGATCGC
ATAAGGAGAGGCCAGCCAAGATGCAGAAAGATTAAGTCAATACTGGGGAAACGCTTACAT
TATGAACAAGTAGTCAGCCATTTTTACTGTTCAGCATTACCTCTTGACCCAAGGATCCAT
TCATGATGAGTATTGGTGCAAATGGCAACGCAGCATTGACAGACATGGAGGGAGAGAGCA
GGCTAGGAAAGGTAGTGAAGGGTTGGGTTGGAAAGGAAGTGTGAAGGGTTGGGCTCCAAT
GCGTTTGATCACAGGATCTGTACTCTGGTGGCACAACAGACAGATAGCTGTTCCAGGTCA
AAGACCCTGACGTAACCCATCTCCCGTCTCACAAGAAAACGCGAGCGAACGTATTGGAAT
GTGGGATGGGTAAAAGAAATCTTTTATTTCTCGTTACACTAGTCGTAGCAGTACTTCATT
TTTACAGTAATTTTTTTTACACTATAGAAGGAATATCAATGGTTTGCATGTATTAGAGAG
GCATATGTTTTGTTTTTGATACGTTATGGAATTGGTTTGCAGATG