Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os11t0137000-01
CDS Infomation	cds chromosome:IRGSP-1.0:11:1702228:1705477:-1 gene:Os11g0137000 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:PIN PROTEIN 1C description:Similar to PIN1-like auxin transport protein. (Os11t0137000-01)
Sequence	ATGATCACGGTGGTGGACCTGTACCACGTCCTGACGGCGGTGGTGCCGCTGTACGTGGCG ATGACGCTGGCGTACGCCTCCGTCCGGTGGTGGCGCATCTTCTCCCCGGACCAGTGCTCC GGCATCAACCGCTTCGTCGCGCTCTTCGCCGTCCCGCTCCTCTCCTTCCACTTCATCTCC ACCAACAACCCCTTCGCCATGAACCTCCGCTTCCTCGCCGCCGACACGCTCCAGAAGCTC ATCGTCCTCGCCCTCCTCGCCCTCTGGTGCCGCCTCTCCGCGCGCGGGTCACTCGACTGG CTCATCACCCTCTTCTCCCTCTCCACCCTCCCCAACACCCTCGTCATGGGCATCCCGCTG CTCAAGGGGATGTACGCCGCCGCCGCCGACGTCGACTCCGGCAGCCTCATGGTGCAGATC GTCGTGCTCCAGTGCATCATCTGGTACACGCTCATGCTGTTCCTCTTCGAGTACCGCGGC GCGCGGCTTCTTGTCATGGAGCAGTTCCCGGACACCGCCGCCTCCATCGTCTCCTTCCGG GTGGATTCCGACGTCGTCTCGCTCGCCGGCGGCGGTGGTGGAGCCGCGGAGCTGCAGGCG GAGGCGGAGGTCGGGGACGATGGCAGGATGCGGGTCACCGTGCGCAAGTCGACGAGCTCG CGCTCCGAGGCGGCGTGCTCGCACGGGACGCAGTCACACTCGCAGTCCATGCAGCCGCGC GTCTCCAACCTCTCCGGCGTCGAGATTTACTCGCTGCAGTCGTCGCGGAACCCGACGCCG CGTGGCTCCAGCTTCAACCACGCCGAGTTCTTCAACATCGTCGGCAACGGCAAGCAGGGC GACGAGGAGAAGGGCGCCGCCGGTGGCGGGGGCCACTCGCCGCAGCCGGTGGTGGGGAAG AGGAAGGACCTGCACATGTTCGTGTGGAGCTCAAGCGCCTCGCCGGTGTCGGAGCGCGCC GCCGCAGCAGCAGCTGGCGCGGTGCACGTCTTCGGCGGTGGTGGCGCCGACCACGGCGAC GCCAAAGGAGCTCAGGCCTATGATGAGTACAGTTTCGGGAACAAGAACGAGAAGGACGGG CCGACGCTGTCCAAGCTGGGGTCCAACTCGACGGCGCAGCTCCGGCCAAAGGACGACGGC GAGGGGATGGCGGCGGCGATGCCGCCGGCGAGCGTGATGACGAGGCTCATCCTGATCATG GTTTGGAGGAAGCTGATCAGGAACCCCAACACTTACTCCAGCCTCCTTGGTGTCATCTGG TCCCTCGTCTCCTACAGGTGGGGGATTGAGATGCCAGCCATCATCGCCCGGTCGATTTCG ATCCTGTCAGATGCAGGGCTTGGAATGGCCATGTTCAGCCTAGGATTGTTCATGGCATTG CAGCCACGGATCATTGCCTGTGGGAACTCCCTTGCTTCGTATGCCATGGCCGTCAGGTTC CTCGTGGGTCCGGCCGTCATGGCTGCCGCCTCCATCGCCGTCGGACTTCGCGGGGTGCTT CTGCACATTGCCATTGTTCAGGCCGCTCTTCCTCAAGGAATCGTGCCCTTTGTGTTTGCC AAGGAGTACAATGTTCATCCTAACATTCTGAGCACAGCCGTGATATTCGGGATGCTGATT GCTCTCCCCATCACATTGGTCTACTACATACTGCTGGGGCTCTGA

Peptide Sequence

PEP ID	Os11t0137000-01
PEP Infomation	pep chromosome:IRGSP-1.0:11:1702228:1705477:-1 gene:Os11g0137000 transcript:Os11t0137000-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:PIN PROTEIN 1C description:Similar to PIN1-like auxin transport protein. (Os11t0137000-01)
Sequence	MITVVDLYHVLTAVVPLYVAMTLAYASVRWWRIFSPDQCSGINRFVALFAVPLLSFHFIS TNNPFAMNLRFLAADTLQKLIVLALLALWCRLSARGSLDWLITLFSLSTLPNTLVMGIPL LKGMYAAAADVDSGSLMVQIVVLQCIIWYTLMLFLFEYRGARLLVMEQFPDTAASIVSFR VDSDVVSLAGGGGGAAELQAEAEVGDDGRMRVTVRKSTSSRSEAACSHGTQSHSQSMQPR VSNLSGVEIYSLQSSRNPTPRGSSFNHAEFFNIVGNGKQGDEEKGAAGGGGHSPQPVVGK RKDLHMFVWSSSASPVSERAAAAAAGAVHVFGGGGADHGDAKGAQAYDEYSFGNKNEKDG PTLSKLGSNSTAQLRPKDDGEGMAAAMPPASVMTRLILIMVWRKLIRNPNTYSSLLGVIW SLVSYRWGIEMPAIIARSISILSDAGLGMAMFSLGLFMALQPRIIACGNSLASYAMAVRF LVGPAVMAAASIAVGLRGVLLHIAIVQAALPQGIVPFVFAKEYNVHPNILSTAVIFGMLI ALPITLVYYILLGL

Transcript Sequence

Transcript ID	Os11t0137000-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:11:1702228:1705477:-1 gene:Os11g0137000 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:PIN PROTEIN 1C description:Similar to PIN1-like auxin transport protein. (Os11t0137000-01)
Sequence	CTCGCTGCTGCTGCTTTTGCCCAAAGCTGCACAACCTGCATTGCCTCTCGCCTGACCCTC TTGCCTCATCTGTGTCTCCCCCCTTCTCTTTTTCTTCAACCCCTCTTTATGCTCGTTTCT CCATTGCAGCTCACCTCCATCTCCTATTCTCCTCCTCCTTGTTGAAGGAGTTCGTGTGCC TCTACCAAGAACAAGAAGAAGCCTCTTGCATCGGCAGCCATGATCACGGTGGTGGACCTG TACCACGTCCTGACGGCGGTGGTGCCGCTGTACGTGGCGATGACGCTGGCGTACGCCTCC GTCCGGTGGTGGCGCATCTTCTCCCCGGACCAGTGCTCCGGCATCAACCGCTTCGTCGCG CTCTTCGCCGTCCCGCTCCTCTCCTTCCACTTCATCTCCACCAACAACCCCTTCGCCATG AACCTCCGCTTCCTCGCCGCCGACACGCTCCAGAAGCTCATCGTCCTCGCCCTCCTCGCC CTCTGGTGCCGCCTCTCCGCGCGCGGGTCACTCGACTGGCTCATCACCCTCTTCTCCCTC TCCACCCTCCCCAACACCCTCGTCATGGGCATCCCGCTGCTCAAGGGGATGTACGCCGCC GCCGCCGACGTCGACTCCGGCAGCCTCATGGTGCAGATCGTCGTGCTCCAGTGCATCATC TGGTACACGCTCATGCTGTTCCTCTTCGAGTACCGCGGCGCGCGGCTTCTTGTCATGGAG CAGTTCCCGGACACCGCCGCCTCCATCGTCTCCTTCCGGGTGGATTCCGACGTCGTCTCG CTCGCCGGCGGCGGTGGTGGAGCCGCGGAGCTGCAGGCGGAGGCGGAGGTCGGGGACGAT GGCAGGATGCGGGTCACCGTGCGCAAGTCGACGAGCTCGCGCTCCGAGGCGGCGTGCTCG CACGGGACGCAGTCACACTCGCAGTCCATGCAGCCGCGCGTCTCCAACCTCTCCGGCGTC GAGATTTACTCGCTGCAGTCGTCGCGGAACCCGACGCCGCGTGGCTCCAGCTTCAACCAC GCCGAGTTCTTCAACATCGTCGGCAACGGCAAGCAGGGCGACGAGGAGAAGGGCGCCGCC GGTGGCGGGGGCCACTCGCCGCAGCCGGTGGTGGGGAAGAGGAAGGACCTGCACATGTTC GTGTGGAGCTCAAGCGCCTCGCCGGTGTCGGAGCGCGCCGCCGCAGCAGCAGCTGGCGCG GTGCACGTCTTCGGCGGTGGTGGCGCCGACCACGGCGACGCCAAAGGAGCTCAGGCCTAT GATGAGTACAGTTTCGGGAACAAGAACGAGAAGGACGGGCCGACGCTGTCCAAGCTGGGG TCCAACTCGACGGCGCAGCTCCGGCCAAAGGACGACGGCGAGGGGATGGCGGCGGCGATG CCGCCGGCGAGCGTGATGACGAGGCTCATCCTGATCATGGTTTGGAGGAAGCTGATCAGG AACCCCAACACTTACTCCAGCCTCCTTGGTGTCATCTGGTCCCTCGTCTCCTACAGGTGG GGGATTGAGATGCCAGCCATCATCGCCCGGTCGATTTCGATCCTGTCAGATGCAGGGCTT GGAATGGCCATGTTCAGCCTAGGATTGTTCATGGCATTGCAGCCACGGATCATTGCCTGT GGGAACTCCCTTGCTTCGTATGCCATGGCCGTCAGGTTCCTCGTGGGTCCGGCCGTCATG GCTGCCGCCTCCATCGCCGTCGGACTTCGCGGGGTGCTTCTGCACATTGCCATTGTTCAG GCCGCTCTTCCTCAAGGAATCGTGCCCTTTGTGTTTGCCAAGGAGTACAATGTTCATCCT AACATTCTGAGCACAGCCGTGATATTCGGGATGCTGATTGCTCTCCCCATCACATTGGTC TACTACATACTGCTGGGGCTCTGAAGAGCTCTCCAAGTCTCAACTCAACTGTGCAAGAAC TTGATGTTACTGACAGTTTGATTAGGATTTATGGTTCTGTTTTAGTTGCTCAGATTTTGT TTGGATGATAGGTCAGCTTAGTGATGCTAGTTAGACAATTATCCGAGGACTTTTGGGTTC AAGTGACGGCCAGCCACGGTTTCTGATTGAAGATTAGGAACATAGACATCACATTAGTGA CAACAGGCATCTAATTTGTAAGACATTGAGAAGGTCTGTTTCAAATTACTGACAATGTAG TAAGACATTGAACAGTGCTTATAAGCTTATTTAGCATTCCAATAACTGATGGTAATGCAC TTAAAGGAGCT