Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os11t0135000-02
CDS Infomation	cds chromosome:IRGSP-1.0:11:1626506:1630253:-1 gene:Os11g0135000 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ZINC-INDUCED FACILITATOR-LIKE 5 description:Similar to Major facilitator superfamily antiporter. (Os11t0135000-01);Similar to Major facilitator superfamily antiporter. (Os11t0135000-02)
Sequence	TTTTTAACTCGTCTTCGAATCTATACTTTCAGCATTGTGCTCAATACTTTGTTTGGATTA AGTGTGAAGTACTGGATGGCTGTTACCACGAGATTCCTTCTTGGTGCTCTGAATGGATTG CTTGCACCAATAAAGGCTTACTCTATCGAAGTTTGCCGAGCTGAACATCAAGCTCTGGGC CTATCAATTGTGAGCACAGCATGGGGAATAGGTCTTGTAGTTGGTCCAGCAATTGGAGGC TACCTCGCGCAGCCTGTCAAACAATATCCTCATCTTTTTCATGAAAAGTCAATATTTGGG AGATTTCCATACCTTCTACCCTGTCTTTGTATATCACTTTTTGCTCTCTTGGTCCTCATA AGCTGTATATGGCTACCGGAGACCCTACATAAGCATAAAGGCCTTGAAACAGGAGTGGAG GCAGCTGAAGCTTCTACTACTCAAGGAAGTGCAGAATCACATAAGAAAAGTTTATTCAGA AATTGGCCATTGATGTCATCTATCATCACATATTGTGTCTTCTCCCTTCACGACACCGCA TATAGCGAGATATTTTCTCTGTGGACTGTAAGTGATAGAAAATATGGTGGACTCAGCTTT TCATCTAAAGATGTTGGGCAAGTTCTTGCAGTGGCAGGTGCCAGCCTTCTTGTATATCAA CTTTTTATCTACCGTTGGGTTGATAAAATTCTTGGACCTATCAACTCAACCCGCATTGCG TCGGTACTATCTATACCGATTATTGCTGCTTATCCCTTTATGACGCACTTATCAGGAATA AGACTTGGTGTGGCCCTCTATAGTGCAGCAATGATCAAAAGTGTTCTTGCTATAACTATA ATTACGGGCACTTCTCTTCTACAAAACAAAGCAGTGCCACAAGGGCAACGGGGTGCTGCA AACGGAATAGCTACAACGGCCATGTCCTTGTTCAAGGCTGTTGCACCAGCTGGCGCAGGT GTTCTATTCTCTTGGGCACAAAAGCGACAGCATGCAGCATTTTTTCCAGGTGATCAGATG GTGTTTCTTTTACTGAACCTGACTGAGGTCATTGGACTCATGTTGACCTTCAAACCTTTC TTGGCGGTTCCTCAACAATACAAATAG

Peptide Sequence

PEP ID	Os11t0135000-02
PEP Infomation	pep chromosome:IRGSP-1.0:11:1626506:1630253:-1 gene:Os11g0135000 transcript:Os11t0135000-02 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ZINC-INDUCED FACILITATOR-LIKE 5 description:Similar to Major facilitator superfamily antiporter. (Os11t0135000-01);Similar to Major facilitator superfamily antiporter. (Os11t0135000-02)
Sequence	FLTRLRIYTFSIVLNTLFGLSVKYWMAVTTRFLLGALNGLLAPIKAYSIEVCRAEHQALG LSIVSTAWGIGLVVGPAIGGYLAQPVKQYPHLFHEKSIFGRFPYLLPCLCISLFALLVLI SCIWLPETLHKHKGLETGVEAAEASTTQGSAESHKKSLFRNWPLMSSIITYCVFSLHDTA YSEIFSLWTVSDRKYGGLSFSSKDVGQVLAVAGASLLVYQLFIYRWVDKILGPINSTRIA SVLSIPIIAAYPFMTHLSGIRLGVALYSAAMIKSVLAITIITGTSLLQNKAVPQGQRGAA NGIATTAMSLFKAVAPAGAGVLFSWAQKRQHAAFFPGDQMVFLLLNLTEVIGLMLTFKPF LAVPQQYK

Transcript Sequence

Transcript ID	Os11t0135000-02
Transcript Infomation	cdna chromosome:IRGSP-1.0:11:1626506:1630253:-1 gene:Os11g0135000 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ZINC-INDUCED FACILITATOR-LIKE 5 description:Similar to Major facilitator superfamily antiporter. (Os11t0135000-01);Similar to Major facilitator superfamily antiporter. (Os11t0135000-02)
Sequence	AATTTTTAACTCGTCTTCGAATCTATACTTTCAGCATTGTGCTCAATACTTTGTTTGGAT TAAGTGTGAAGTACTGGATGGCTGTTACCACGAGATTCCTTCTTGGTGCTCTGAATGGAT TGCTTGCACCAATAAAGGCTTACTCTATCGAAGTTTGCCGAGCTGAACATCAAGCTCTGG GCCTATCAATTGTGAGCACAGCATGGGGAATAGGTCTTGTAGTTGGTCCAGCAATTGGAG GCTACCTCGCGCAGCCTGTCAAACAATATCCTCATCTTTTTCATGAAAAGTCAATATTTG GGAGATTTCCATACCTTCTACCCTGTCTTTGTATATCACTTTTTGCTCTCTTGGTCCTCA TAAGCTGTATATGGCTACCGGAGACCCTACATAAGCATAAAGGCCTTGAAACAGGAGTGG AGGCAGCTGAAGCTTCTACTACTCAAGGAAGTGCAGAATCACATAAGAAAAGTTTATTCA GAAATTGGCCATTGATGTCATCTATCATCACATATTGTGTCTTCTCCCTTCACGACACCG CATATAGCGAGATATTTTCTCTGTGGACTGTAAGTGATAGAAAATATGGTGGACTCAGCT TTTCATCTAAAGATGTTGGGCAAGTTCTTGCAGTGGCAGGTGCCAGCCTTCTTGTATATC AACTTTTTATCTACCGTTGGGTTGATAAAATTCTTGGACCTATCAACTCAACCCGCATTG CGTCGGTACTATCTATACCGATTATTGCTGCTTATCCCTTTATGACGCACTTATCAGGAA TAAGACTTGGTGTGGCCCTCTATAGTGCAGCAATGATCAAAAGTGTTCTTGCTATAACTA TAATTACGGGCACTTCTCTTCTACAAAACAAAGCAGTGCCACAAGGGCAACGGGGTGCTG CAAACGGAATAGCTACAACGGCCATGTCCTTGTTCAAGGCTGTTGCACCAGCTGGCGCAG GTGTTCTATTCTCTTGGGCACAAAAGCGACAGCATGCAGCATTTTTTCCAGGTGATCAGA TGGTGTTTCTTTTACTGAACCTGACTGAGGTCATTGGACTCATGTTGACCTTCAAACCTT TCTTGGCGGTTCCTCAACAATACAAATAGAACATTCAGATACTGTCAGCTGGTGTGGCAA ACACCATAGAGAGATAGTTGTAGCTAGTACTATGTTTTAGTATTAAAACATGGTTTAGAT ATGGTTGTAGCAGAGTGTTAGAAACATGCACCATTCCAGGTGCAGAGCCTCTGTTAGGTT GTTCTTCTTTTTGTTCTGCTTTGGGTCTGTGAGATAAATAATCTTGCAAAAGCTATGACA TTTTTTATTGCAGCTTTGGAGT