Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os11t0134500-01
CDS Infomation

cds chromosome:IRGSP-1.0:11:1610977:1615242:-1 gene:Os11g0134500 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:OsWD40-182 description:WD40 repeat-like domain containing protein. (Os11t0134500-01)
Sequence

ATGGGTCGCAAGATCAAAGTCAAGAAGAAGAAGGCATCGAGCAAGAAAGCCGAAGCTTCA
TCGTCTAGGGTGCCTTCTGCCCCAGCCAAGGTATGGCAACCTGGCGTGGATACACTGGAA
GAGGGGGAGGAGCTCCAGTTCGATCCTCAGGCTTACAATTATCTCCGAGGGTTTAACATT
GGCTGGCCATGCTTGAGTTTTGATGTTGTGCGGGATCAACTTGGCCTTGTGCGATCTGAA
TTCCCACATACATTATATGGCGTTGCTGGAACTCAGGCCGAGAGGGCTACATGGAATTAT
ATCGGCATTTTCAAGATTTGCAACATAAACGGGAAGAAGCGGGAACCTATACCAGCATCA
GCAATTGATGGCGACAGTGATATGGATAGTGAAAGTAGTAGTGATGAAGAAGATGAAGCA
GTTAATGAAGATACAATGCCCATTTTACATCTAAAAAAGGTGGCTCATGCGGGGTGTGTA
AATCGTATTCGCTCTATGAATCAGGAACCACATATATGTGCAACATGGGGAGACACAGGT
CATGTTCAGGTGTGGGACTTCAGCTCCTTCCTTAATTCGTTAGCAGAGTCTGGAGCAGTT
GCACACAACGAAGACGACAGAATCCATAATCACGTACCTGTGAAAATATTTGGTAGCCAT
AAAGATGAAGGCTATGCAATTGATTGGAGTCCGCTTGTTACTGGAAGACTTGTTTCTGGT
GATTGCAATAAATGCATCCACCTCTGGGAGCCAACTTCAAACAGTTGGAATGTCGATACA
AATCCATTTGTAGGACACACTGCAAGTGTTGAAGATTTGCAGTGGAGTCCCACAGAAGCC
GACATATTTGCCTCTTGTTCAGCCGACAGAACAATATCTATCTGGGATATACGGACAGGG
AAGAAACCTTGTATTTCTGTTAGGGCTCACAATGCTGACGTGAATGTCATCTCATGGAAC
CGGCTTGCTAGCTGTATGATAGCTTCAGGATGCGATGATGGAAGTTTCTCAATTCGTGAT
CTTAGATTAATCAAGGATGACTCCTTGGTCGCCCATTTTGAATACCACAAGCACCCAATT
ACATCTGTGGAATGGAGCCCACATGAACCGTCAACACTAGCTGTATCATCAGCTGACCAT
CAACTGACAATTTGGGATCTTTCATTGGAAAAAGATGCTGAAGAGGAGGCAGAGTTCAGG
GCAAGGATGAGAGAACAGGCTGATGCCCCTGAAGATTTACCCCCACAACTTCTCTTTGTT
CATCAGGGCCAGAAAGACTTGAAAGAATTGCACTGGCACCCACAGATACCTAGTATGATC
ATATCTACGGCAGCTGATGGATTCAATATGTTGATGCCCAGCAACATCGATACAACCATT
CGAGAAGCTGACGCATAG

Peptide Sequence

PEP ID

Os11t0134500-01
PEP Infomation

pep chromosome:IRGSP-1.0:11:1610977:1615242:-1 gene:Os11g0134500 transcript:Os11t0134500-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:OsWD40-182 description:WD40 repeat-like domain containing protein. (Os11t0134500-01)
Sequence

MGRKIKVKKKKASSKKAEASSSRVPSAPAKVWQPGVDTLEEGEELQFDPQAYNYLRGFNI
GWPCLSFDVVRDQLGLVRSEFPHTLYGVAGTQAERATWNYIGIFKICNINGKKREPIPAS
AIDGDSDMDSESSSDEEDEAVNEDTMPILHLKKVAHAGCVNRIRSMNQEPHICATWGDTG
HVQVWDFSSFLNSLAESGAVAHNEDDRIHNHVPVKIFGSHKDEGYAIDWSPLVTGRLVSG
DCNKCIHLWEPTSNSWNVDTNPFVGHTASVEDLQWSPTEADIFASCSADRTISIWDIRTG
KKPCISVRAHNADVNVISWNRLASCMIASGCDDGSFSIRDLRLIKDDSLVAHFEYHKHPI
TSVEWSPHEPSTLAVSSADHQLTIWDLSLEKDAEEEAEFRARMREQADAPEDLPPQLLFV
HQGQKDLKELHWHPQIPSMIISTAADGFNMLMPSNIDTTIREADA

Transcript Sequence

Transcript ID

Os11t0134500-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:11:1610977:1615242:-1 gene:Os11g0134500 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:OsWD40-182 description:WD40 repeat-like domain containing protein. (Os11t0134500-01)
Sequence

GCCACTTCCAACCTCCGCCCTCTCTTCTCTTCTCCTCTTCCTCCTCTCTCCTTCTCCCCG
AGCTGCCCCTCTTCTCTTCCTCCGATGGGTCGCAAGATCAAAGTCAAGAAGAAGAAGGCA
TCGAGCAAGAAAGCCGAAGCTTCATCGTCTAGGGTGCCTTCTGCCCCAGCCAAGGTATGG
CAACCTGGCGTGGATACACTGGAAGAGGGGGAGGAGCTCCAGTTCGATCCTCAGGCTTAC
AATTATCTCCGAGGGTTTAACATTGGCTGGCCATGCTTGAGTTTTGATGTTGTGCGGGAT
CAACTTGGCCTTGTGCGATCTGAATTCCCACATACATTATATGGCGTTGCTGGAACTCAG
GCCGAGAGGGCTACATGGAATTATATCGGCATTTTCAAGATTTGCAACATAAACGGGAAG
AAGCGGGAACCTATACCAGCATCAGCAATTGATGGCGACAGTGATATGGATAGTGAAAGT
AGTAGTGATGAAGAAGATGAAGCAGTTAATGAAGATACAATGCCCATTTTACATCTAAAA
AAGGTGGCTCATGCGGGGTGTGTAAATCGTATTCGCTCTATGAATCAGGAACCACATATA
TGTGCAACATGGGGAGACACAGGTCATGTTCAGGTGTGGGACTTCAGCTCCTTCCTTAAT
TCGTTAGCAGAGTCTGGAGCAGTTGCACACAACGAAGACGACAGAATCCATAATCACGTA
CCTGTGAAAATATTTGGTAGCCATAAAGATGAAGGCTATGCAATTGATTGGAGTCCGCTT
GTTACTGGAAGACTTGTTTCTGGTGATTGCAATAAATGCATCCACCTCTGGGAGCCAACT
TCAAACAGTTGGAATGTCGATACAAATCCATTTGTAGGACACACTGCAAGTGTTGAAGAT
TTGCAGTGGAGTCCCACAGAAGCCGACATATTTGCCTCTTGTTCAGCCGACAGAACAATA
TCTATCTGGGATATACGGACAGGGAAGAAACCTTGTATTTCTGTTAGGGCTCACAATGCT
GACGTGAATGTCATCTCATGGAACCGGCTTGCTAGCTGTATGATAGCTTCAGGATGCGAT
GATGGAAGTTTCTCAATTCGTGATCTTAGATTAATCAAGGATGACTCCTTGGTCGCCCAT
TTTGAATACCACAAGCACCCAATTACATCTGTGGAATGGAGCCCACATGAACCGTCAACA
CTAGCTGTATCATCAGCTGACCATCAACTGACAATTTGGGATCTTTCATTGGAAAAAGAT
GCTGAAGAGGAGGCAGAGTTCAGGGCAAGGATGAGAGAACAGGCTGATGCCCCTGAAGAT
TTACCCCCACAACTTCTCTTTGTTCATCAGGGCCAGAAAGACTTGAAAGAATTGCACTGG
CACCCACAGATACCTAGTATGATCATATCTACGGCAGCTGATGGATTCAATATGTTGATG
CCCAGCAACATCGATACAACCATTCGAGAAGCTGACGCATAGATTTCTACAGAAGCACTG
TTCATCTGAATCAAGGTTTCATGGATTAATTTTTTTGAGGTGGGAGAGTGTAATGATACT
GCATGTCTGCAGGTATCAGTTTTTGATAGCTTGTATCCTATTCGTTGTCATTCATAGTGG
TAGGTTCTCAGTTTTGCACTGATGTCGCCCGAATGAGGATAATCAAAAGTATCTCGATCA
ACTGAGATGATATGTTATATTCTGTACAAGATAAGATTAATGATTGTGT