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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os11t0134400-00
CDS Infomation

cds chromosome:IRGSP-1.0:11:1609280:1610131:-1 gene:Os11g0134400 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:CALMODULIN-LIKE PROTEIN 2 description:Calmodulin-like protein 3. (Os11t0134400-00)
Sequence

ATGGACCATCTGACAAAGGAGCAGATCGCTGAGTTCCGGGAGGCATTCAACCTGTTCGAC
AAAGATGGAGACGGGACGATCACGAGCAAGGAGCTAGGGACGGTGATGGGGTCGCTGGGG
CAGTCGCCGACGGAGGCGGAGCTGAAGAAGATGGTGGAGGAGGTGGACGCGGATGGCAGC
GGCAGCATCGAGTTCGAGGAGTTCCTGGGCCTCCTCGCCCGCAAGCTCCGCGACACCGGC
GCCGAGGACGACATCCGCGAGGCCTTCCGCGTCTTCGACAAGGACCAGAACGGCTTCATC
ACCCCCGACGAGCTCCGCCACGTCATGGCCAACCTCGGCGACCCCCTCTCCGACGACGAG
CTCGCCGACATGCTCCACGAGGCCGACTCCGACGGCGACGGCCAGATCAACTACAACGAG
TTCCTCAAGGTCATGATGGCAAAGCGAAGGCAGAATATGATGGAGGGACATGGAAGTGGA
GGCCATCGGTCAAGTAACTCCCACAAGAAATCCGGCTGCTGCGGCCCGAATTCCTCATGT
ACCATCCTCTGA

Peptide Sequence

PEP ID

Os11t0134400-00
PEP Infomation

pep chromosome:IRGSP-1.0:11:1609280:1610131:-1 gene:Os11g0134400 transcript:Os11t0134400-00 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:CALMODULIN-LIKE PROTEIN 2 description:Calmodulin-like protein 3. (Os11t0134400-00)
Sequence

MDHLTKEQIAEFREAFNLFDKDGDGTITSKELGTVMGSLGQSPTEAELKKMVEEVDADGS
GSIEFEEFLGLLARKLRDTGAEDDIREAFRVFDKDQNGFITPDELRHVMANLGDPLSDDE
LADMLHEADSDGDGQINYNEFLKVMMAKRRQNMMEGHGSGGHRSSNSHKKSGCCGPNSSC
TIL

Transcript Sequence

Transcript ID

Os11t0134400-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:11:1609280:1610131:-1 gene:Os11g0134400 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:CALMODULIN-LIKE PROTEIN 2 description:Calmodulin-like protein 3. (Os11t0134400-00)
Sequence

ATGGACCATCTGACAAAGGAGCAGATCGCTGAGTTCCGGGAGGCATTCAACCTGTTCGAC
AAAGATGGAGACGGGACGATCACGAGCAAGGAGCTAGGGACGGTGATGGGGTCGCTGGGG
CAGTCGCCGACGGAGGCGGAGCTGAAGAAGATGGTGGAGGAGGTGGACGCGGATGGCAGC
GGCAGCATCGAGTTCGAGGAGTTCCTGGGCCTCCTCGCCCGCAAGCTCCGCGACACCGGC
GCCGAGGACGACATCCGCGAGGCCTTCCGCGTCTTCGACAAGGACCAGAACGGCTTCATC
ACCCCCGACGAGCTCCGCCACGTCATGGCCAACCTCGGCGACCCCCTCTCCGACGACGAG
CTCGCCGACATGCTCCACGAGGCCGACTCCGACGGCGACGGCCAGATCAACTACAACGAG
TTCCTCAAGGTCATGATGGCAAAGCGAAGGCAGAATATGATGGAGGGACATGGAAGTGGA
GGCCATCGGTCAAGTAACTCCCACAAGAAATCCGGCTGCTGCGGCCCGAATTCCTCATGT
ACCATCCTCTGA