Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os11t0131600-00
CDS Infomation	cds chromosome:IRGSP-1.0:11:1439580:1441577:-1 gene:Os11g0131600 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:SET protein 40, SUVH Histone Methyltransferase 11 description:Similar to YDG/SRA domain containing protein. (Os11t0131600-00)
Sequence	ATGGAGAACTCGGAAGATGAAGCAGAGAGTGACAAACTACCCTTAGACTTGGAGCCATTG CGCTCATTAGCACCAAAGTTTCCTACTATTTTGGGATATGATGTGGAAACTCAATCAACT GATCCACTGTTAGTTTATGCCACACCATCCATACCTTGCTCCTCATCAGAACAGCCTCAA GAAGCCCCAGCTTCATTTTCTCTGCCCTTACCAAAGTCACCCGTCCCTATAAAGGCTACA CCCATCTCAGCGGCATTTCCAACACCGCAACATGAAGATGAATCATCAGATCAAGATTAC AAGCCCTTTTGCAAGAATAAAAAACCAGCGATGCCGAAGAGAGCCAAGAGGCCCCAGCAA GCTGAGAAATCCAATGATGCTAACATCAAGCGCAGATCAATAAGGAGGAACCTGGACAAC GAGTTCAACTTGTGCTCATCCTCATCAGACAACCCAAAGGAATCGGTGGAAGGAATCCTG ATGATGTTTGATTCACTTCGGCGCCGTGTACTGCAATTGGATGAAAAAGAGGATGCAAGC AGGCGGGCTGACCTGAAAGCTGGCACTCTCATGATGCAGAACAACCTCAGAATCAACAAT CATAAGATGATAGGGCATGTGCCTGGTGTTGAAGTCGGTGACATTTTCTTCTTTAGGATT GAGATGTGCATTGTTGGTTTACATGCACCAGCCATGGGTGGCATTGATTACATCTCTTCT AAGAACAAAGATGAGACTCTGGCTGTCTGCATCATTTCATCTGGAGGCTATGAGAATGAC GATGATGACACTGACATTTTGGTGTACACAGGACAGGGAGGCAACAGTCGTCACAAGGAG AAGCACGATCAGAAGCTTGAGAGAGGTAACCTTGCTCTCATGAACAGCAAGAGCAAGAAG AATCAGATCAGGGTTGTGCGCAGCGCACAAGACCCCTTCTGTAACTCAGGCAAAATATAT ATTTATGATGGGCTTTATCGTATCGAAGACACTTGGACAGACACGGCAAAGAACGGATTT AATGTTTTCAAGTACAAGCTGAGAAGGGACCCAGGACAGCCTGATGGAATTTCACTTTGG AAGATGACTGAGAAGTGGAAAGCAAATCCTGCCACAAGAGAAAAGGCTATATTGTTGGAT TTATCATCAAAGGTTGAACACCTACCTGTGTGCCTTGTTAATGATGTTGATGATGAAAAA GGGCCAAGTCACTTCAATTATGTTGCTGGAGTGAAGTATTTGAGACCTCTTAGGAAGACA AAACCATTACAATGTTGCAAATGTCCTAGTGTCTGCTTGCCTGGTGACCCTAATTGTTCG TGTGCGCAACAGAATGGTGGTGATCTTCCTTACAGTGCAACGGGATTGCTGGCAAAGCAC ACTCCGATGGTTTATGAGTGCTCCTCTAACTGTCAGTGTTCTCATAATTGTCGAAACAGG ATCACACAGAAGGGTATAAAACTGAACTTTGAGGTTTTCTGGACTGGAGACCGTGGCTGG GGTCTGCGGTCGTGGGATCCTATCCGTGCTGGCACATTCATTTGTGAGTACGCCGGTGAA GTCATTGATGAAACTAAGATGGACATAGATGTTGAGGAAGACAAATATACCTTTCGCGCT TCATGTCCCGGCAATAAGGCTTTAAGCTGGAATTTGGGAGAAGAATTACTTGAAGAAAAA AGTACGGCTGTGATAACCAAGAACTTTAAGAAACTACCAATCATCATAAGAGCAAACAAT GAAGGGAATGTGGCTCGTTTTCTGAACCATAGCTGTTCTCCAAATCTCCTTTGGCAAGCT GTACAGTATGACCATGGCGATGACAGCTACCCACATATCATGTTTTTTGCAATGGAACAT ATCCCTCCCATGACTGAACTGACTTATGATTATGGTACAAGAGGTGCTCCCCCTGGCTTT GAGGGAAAACCCTTCAAAGCTTGCAAACTCAAATCATGCCTCTGTGGCTCTAAGCATTGT CGAGGTTTGTTCTGA

Peptide Sequence

PEP ID	Os11t0131600-00
PEP Infomation	pep chromosome:IRGSP-1.0:11:1439580:1441577:-1 gene:Os11g0131600 transcript:Os11t0131600-00 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:SET protein 40, SUVH Histone Methyltransferase 11 description:Similar to YDG/SRA domain containing protein. (Os11t0131600-00)
Sequence	MENSEDEAESDKLPLDLEPLRSLAPKFPTILGYDVETQSTDPLLVYATPSIPCSSSEQPQ EAPASFSLPLPKSPVPIKATPISAAFPTPQHEDESSDQDYKPFCKNKKPAMPKRAKRPQQ AEKSNDANIKRRSIRRNLDNEFNLCSSSSDNPKESVEGILMMFDSLRRRVLQLDEKEDAS RRADLKAGTLMMQNNLRINNHKMIGHVPGVEVGDIFFFRIEMCIVGLHAPAMGGIDYISS KNKDETLAVCIISSGGYENDDDDTDILVYTGQGGNSRHKEKHDQKLERGNLALMNSKSKK NQIRVVRSAQDPFCNSGKIYIYDGLYRIEDTWTDTAKNGFNVFKYKLRRDPGQPDGISLW KMTEKWKANPATREKAILLDLSSKVEHLPVCLVNDVDDEKGPSHFNYVAGVKYLRPLRKT KPLQCCKCPSVCLPGDPNCSCAQQNGGDLPYSATGLLAKHTPMVYECSSNCQCSHNCRNR ITQKGIKLNFEVFWTGDRGWGLRSWDPIRAGTFICEYAGEVIDETKMDIDVEEDKYTFRA SCPGNKALSWNLGEELLEEKSTAVITKNFKKLPIIIRANNEGNVARFLNHSCSPNLLWQA VQYDHGDDSYPHIMFFAMEHIPPMTELTYDYGTRGAPPGFEGKPFKACKLKSCLCGSKHC RGLF

Transcript Sequence

Transcript ID	Os11t0131600-00
Transcript Infomation	cdna chromosome:IRGSP-1.0:11:1439580:1441577:-1 gene:Os11g0131600 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:SET protein 40, SUVH Histone Methyltransferase 11 description:Similar to YDG/SRA domain containing protein. (Os11t0131600-00)
Sequence	ATGGAGAACTCGGAAGATGAAGCAGAGAGTGACAAACTACCCTTAGACTTGGAGCCATTG CGCTCATTAGCACCAAAGTTTCCTACTATTTTGGGATATGATGTGGAAACTCAATCAACT GATCCACTGTTAGTTTATGCCACACCATCCATACCTTGCTCCTCATCAGAACAGCCTCAA GAAGCCCCAGCTTCATTTTCTCTGCCCTTACCAAAGTCACCCGTCCCTATAAAGGCTACA CCCATCTCAGCGGCATTTCCAACACCGCAACATGAAGATGAATCATCAGATCAAGATTAC AAGCCCTTTTGCAAGAATAAAAAACCAGCGATGCCGAAGAGAGCCAAGAGGCCCCAGCAA GCTGAGAAATCCAATGATGCTAACATCAAGCGCAGATCAATAAGGAGGAACCTGGACAAC GAGTTCAACTTGTGCTCATCCTCATCAGACAACCCAAAGGAATCGGTGGAAGGAATCCTG ATGATGTTTGATTCACTTCGGCGCCGTGTACTGCAATTGGATGAAAAAGAGGATGCAAGC AGGCGGGCTGACCTGAAAGCTGGCACTCTCATGATGCAGAACAACCTCAGAATCAACAAT CATAAGATGATAGGGCATGTGCCTGGTGTTGAAGTCGGTGACATTTTCTTCTTTAGGATT GAGATGTGCATTGTTGGTTTACATGCACCAGCCATGGGTGGCATTGATTACATCTCTTCT AAGAACAAAGATGAGACTCTGGCTGTCTGCATCATTTCATCTGGAGGCTATGAGAATGAC GATGATGACACTGACATTTTGGTGTACACAGGACAGGGAGGCAACAGTCGTCACAAGGAG AAGCACGATCAGAAGCTTGAGAGAGGTAACCTTGCTCTCATGAACAGCAAGAGCAAGAAG AATCAGATCAGGGTTGTGCGCAGCGCACAAGACCCCTTCTGTAACTCAGGCAAAATATAT ATTTATGATGGGCTTTATCGTATCGAAGACACTTGGACAGACACGGCAAAGAACGGATTT AATGTTTTCAAGTACAAGCTGAGAAGGGACCCAGGACAGCCTGATGGAATTTCACTTTGG AAGATGACTGAGAAGTGGAAAGCAAATCCTGCCACAAGAGAAAAGGCTATATTGTTGGAT TTATCATCAAAGGTTGAACACCTACCTGTGTGCCTTGTTAATGATGTTGATGATGAAAAA GGGCCAAGTCACTTCAATTATGTTGCTGGAGTGAAGTATTTGAGACCTCTTAGGAAGACA AAACCATTACAATGTTGCAAATGTCCTAGTGTCTGCTTGCCTGGTGACCCTAATTGTTCG TGTGCGCAACAGAATGGTGGTGATCTTCCTTACAGTGCAACGGGATTGCTGGCAAAGCAC ACTCCGATGGTTTATGAGTGCTCCTCTAACTGTCAGTGTTCTCATAATTGTCGAAACAGG ATCACACAGAAGGGTATAAAACTGAACTTTGAGGTTTTCTGGACTGGAGACCGTGGCTGG GGTCTGCGGTCGTGGGATCCTATCCGTGCTGGCACATTCATTTGTGAGTACGCCGGTGAA GTCATTGATGAAACTAAGATGGACATAGATGTTGAGGAAGACAAATATACCTTTCGCGCT TCATGTCCCGGCAATAAGGCTTTAAGCTGGAATTTGGGAGAAGAATTACTTGAAGAAAAA AGTACGGCTGTGATAACCAAGAACTTTAAGAAACTACCAATCATCATAAGAGCAAACAAT GAAGGGAATGTGGCTCGTTTTCTGAACCATAGCTGTTCTCCAAATCTCCTTTGGCAAGCT GTACAGTATGACCATGGCGATGACAGCTACCCACATATCATGTTTTTTGCAATGGAACAT ATCCCTCCCATGACTGAACTGACTTATGATTATGGTACAAGAGGTGCTCCCCCTGGCTTT GAGGGAAAACCCTTCAAAGCTTGCAAACTCAAATCATGCCTCTGTGGCTCTAAGCATTGT CGAGGTTTGTTCTGATAA