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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os11t0131200-01
CDS Infomation

cds chromosome:IRGSP-1.0:11:1429209:1432687:-1 gene:Os11g0131200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Mpv17/PMP22 family protein, expressed. (Os11t0131200-01)
Sequence

ATGGCGATGGCCTCCACCCTCCCGCTCCTCCTCGTGCACCGCTCCACCCCTCCGACTCCG
AGGCCTACCGCGCCGCCGCTCCTCCACTCCCGCCGCCTCACCCTTCCTTCCCGCCTCGCC
TCGCTCCCCGCGACAATCGCAGTCGTCCACCCGCGCAAGGGCGTCCGCCTCTCGAAGCTC
CACGCCGCCTCCTGCTGCGATTCCGCCTCCGCCGCCGGAGTCACCACCGGAGGAGGAGCT
GGTGGTGGTGGAGCAAAAGGAGCAATGGATTGGCGTCTCCTGTTAGCCTGGTACCTGCTG
GCTCTTGATAAGCATCCCATCACCACTAAGGCTGTTACCTCTGCCGTCCTAACCCTGACC
GGAGACCTCATCTGCCAGCTTGCAATTGATAAAGTGCCAAAGCTAGATTTGAAGAGAACG
TTTGTATTCACATTTTTGGGACTTGTCCTGGTGGGGCCAACATTGCATGTCTGGTACTTG
TACTTGAGTAAATTAGTGACGATCAATGGTGCATCAGGTGCAATTGCTCGCCTCTTACTT
GATCAGTTCATTTTCTCTCCCATTTTCATTGGAGTGTTTATGAGTTTACTCGTCACCTTG
GAGGGAAAGCCTTCTCTTGTAGTTCCAAAGCTCAAGCAGGAGTGGTTATCATCAGTGATT
GCGAATTGGCAATTGTGGATACCCTTTCAGTTCTTGAATTTTTACTTTGTCCCACAAAAA
TTTCAGGTTCTTGCTGCTAATTTTGTAGCCCTTGCGTGGAACGTGATTCTATCATTTAAA
GCTCACAAAGAAGTTACTGTGAAATAG

Peptide Sequence

PEP ID

Os11t0131200-01
PEP Infomation

pep chromosome:IRGSP-1.0:11:1429209:1432687:-1 gene:Os11g0131200 transcript:Os11t0131200-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Mpv17/PMP22 family protein, expressed. (Os11t0131200-01)
Sequence

MAMASTLPLLLVHRSTPPTPRPTAPPLLHSRRLTLPSRLASLPATIAVVHPRKGVRLSKL
HAASCCDSASAAGVTTGGGAGGGGAKGAMDWRLLLAWYLLALDKHPITTKAVTSAVLTLT
GDLICQLAIDKVPKLDLKRTFVFTFLGLVLVGPTLHVWYLYLSKLVTINGASGAIARLLL
DQFIFSPIFIGVFMSLLVTLEGKPSLVVPKLKQEWLSSVIANWQLWIPFQFLNFYFVPQK
FQVLAANFVALAWNVILSFKAHKEVTVK

Transcript Sequence

Transcript ID

Os11t0131200-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:11:1429209:1432687:-1 gene:Os11g0131200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Mpv17/PMP22 family protein, expressed. (Os11t0131200-01)
Sequence

AGTTATTTGCAGCATCAGCGCAAGCACCACCCATGGCGATGGCCTCCACCCTCCCGCTCC
TCCTCGTGCACCGCTCCACCCCTCCGACTCCGAGGCCTACCGCGCCGCCGCTCCTCCACT
CCCGCCGCCTCACCCTTCCTTCCCGCCTCGCCTCGCTCCCCGCGACAATCGCAGTCGTCC
ACCCGCGCAAGGGCGTCCGCCTCTCGAAGCTCCACGCCGCCTCCTGCTGCGATTCCGCCT
CCGCCGCCGGAGTCACCACCGGAGGAGGAGCTGGTGGTGGTGGAGCAAAAGGAGCAATGG
ATTGGCGTCTCCTGTTAGCCTGGTACCTGCTGGCTCTTGATAAGCATCCCATCACCACTA
AGGCTGTTACCTCTGCCGTCCTAACCCTGACCGGAGACCTCATCTGCCAGCTTGCAATTG
ATAAAGTGCCAAAGCTAGATTTGAAGAGAACGTTTGTATTCACATTTTTGGGACTTGTCC
TGGTGGGGCCAACATTGCATGTCTGGTACTTGTACTTGAGTAAATTAGTGACGATCAATG
GTGCATCAGGTGCAATTGCTCGCCTCTTACTTGATCAGTTCATTTTCTCTCCCATTTTCA
TTGGAGTGTTTATGAGTTTACTCGTCACCTTGGAGGGAAAGCCTTCTCTTGTAGTTCCAA
AGCTCAAGCAGGAGTGGTTATCATCAGTGATTGCGAATTGGCAATTGTGGATACCCTTTC
AGTTCTTGAATTTTTACTTTGTCCCACAAAAATTTCAGGTTCTTGCTGCTAATTTTGTAG
CCCTTGCGTGGAACGTGATTCTATCATTTAAAGCTCACAAAGAAGTTACTGTGAAATAGG
TTTAGGCAGATTCGGATATATAGTTGGCGACACGGAGAAGTACGCAGTGGCTTGTCGCAG
CTGCAGTTTGCTAACGAATGAGCTCCACGTCCATGCCCGGCGAGCATAGCTCTCTTTTGT
GCCCCTAACAGTTGAGGTGTAGAAATTCTTTGGTAGTGAAATATCTAGGGCGTGTTCCTT
ACTGGTATTGCTGTACTGAAGGCGGCAAAGTAAGTAACCATATCACCGTGATGGCATGCC
TGAGCCTGCAAACGCATGGTGTTGAGATCTTGTACATTGTTATATGTAGTAGGTCAAGTG
AGTAGGTTCAAACTGTCATTATCTGAAGCAGTGGTGTACTGTTTCATCCTGCCAACGCGG
TGTGATCAGTGGTTGTGTGCGCCAGCTGACTCTGTTTATCTGTCTGGCAAACACAGTCGG
TGCCTGTTTTCTCTTGGGCTTGCATCCTTCCTGTCTCCGTTGTGTAAGCAAGGGTTGCTG
TTGATCCAGCTGACCCGACAGTGATGTGTTTAGCATGAACAACACAGTTCTGCCTTCTAT
TTTTC