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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os11t0127800-02
CDS Infomation

cds chromosome:IRGSP-1.0:11:1280119:1281678:1 gene:Os11g0127800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to FHA domain containing protein, expressed. (Os11t0127800-01);Similar to FHA domain containing protein, expressed. (Os11t0127800-02)
Sequence

CTGCTGAGCAGTGAGCACAAATCACAGACACAAATGGAAGCAGCAGTGGCTACTCCTTCC
TTGCTCTTCTCTAGCCCAACCCCCAGGAGGCCTTCCTCCTGCTTGCCTCCTCCTCCTCCT
TGCAGCAGCAGCAGCAGCAGCTACGCCTCCCATGGTTTCAAGCTGCTGCAGCCGCAGTTG
CTGTTCATCAATCGGCTAACCAGCAGAAACAGCAACGGGAGTAGCAGAAGAAGCATTTCC
ATTTTGTCGCTGAGGTGCTCTTCCAGTGGCACTGACAGCGCGTCTTCTTCCGCCACTTCA
GAAAGATGGGTTCTCGAGCCTGCAGGAGACGGCGATTGGCGTCATATCGGGTACCGCGTC
GCACGACCCGGCGGCTTCCAGATAGCATCCGAGGCGGCGGTGACGGTGGGTCGGGTTCCT
GAACAGGCTGACATCGTCCTGTCTGTCGCAACAGTTTCTGGGACGCACGCACGGCTGGAG
AAGAAAGAGGGGAGCTTGTTGGTAACAGACCTGGAGAGCACGAATGGCACCTACATCAAC
GAGAGGCGCCTCACCCCGGGTTTCCCCACTCCTATCGATCCCGGCAGCCTCCTCATCTTT
GGTGACATCCACCTGGCCATGTTCCGTGTCTCCAAGATGATCGTCGATGTGTCCAGTGAC
ACCAATGAAGCTGAGCAGGAAGCTGAGACGGCTCAAGTATCAGCGGCAACTCAACAAACC
AATTAG

Peptide Sequence

PEP ID

Os11t0127800-02
PEP Infomation

pep chromosome:IRGSP-1.0:11:1280119:1281678:1 gene:Os11g0127800 transcript:Os11t0127800-02 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to FHA domain containing protein, expressed. (Os11t0127800-01);Similar to FHA domain containing protein, expressed. (Os11t0127800-02)
Sequence

LLSSEHKSQTQMEAAVATPSLLFSSPTPRRPSSCLPPPPPCSSSSSSYASHGFKLLQPQL
LFINRLTSRNSNGSSRRSISILSLRCSSSGTDSASSSATSERWVLEPAGDGDWRHIGYRV
ARPGGFQIASEAAVTVGRVPEQADIVLSVATVSGTHARLEKKEGSLLVTDLESTNGTYIN
ERRLTPGFPTPIDPGSLLIFGDIHLAMFRVSKMIVDVSSDTNEAEQEAETAQVSAATQQT
N

Transcript Sequence

Transcript ID

Os11t0127800-02
Transcript Infomation

cdna chromosome:IRGSP-1.0:11:1280119:1281678:1 gene:Os11g0127800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to FHA domain containing protein, expressed. (Os11t0127800-01);Similar to FHA domain containing protein, expressed. (Os11t0127800-02)
Sequence

ACTGCTGAGCAGTGAGCACAAATCACAGACACAAATGGAAGCAGCAGTGGCTACTCCTTC
CTTGCTCTTCTCTAGCCCAACCCCCAGGAGGCCTTCCTCCTGCTTGCCTCCTCCTCCTCC
TTGCAGCAGCAGCAGCAGCAGCTACGCCTCCCATGGTTTCAAGCTGCTGCAGCCGCAGTT
GCTGTTCATCAATCGGCTAACCAGCAGAAACAGCAACGGGAGTAGCAGAAGAAGCATTTC
CATTTTGTCGCTGAGGTGCTCTTCCAGTGGCACTGACAGCGCGTCTTCTTCCGCCACTTC
AGAAAGATGGGTTCTCGAGCCTGCAGGAGACGGCGATTGGCGTCATATCGGGTACCGCGT
CGCACGACCCGGCGGCTTCCAGATAGCATCCGAGGCGGCGGTGACGGTGGGTCGGGTTCC
TGAACAGGCTGACATCGTCCTGTCTGTCGCAACAGTTTCTGGGACGCACGCACGGCTGGA
GAAGAAAGAGGGGAGCTTGTTGGTAACAGACCTGGAGAGCACGAATGGCACCTACATCAA
CGAGAGGCGCCTCACCCCGGGTTTCCCCACTCCTATCGATCCCGGCAGCCTCCTCATCTT
TGGTGACATCCACCTGGCCATGTTCCGTGTCTCCAAGATGATCGTCGATGTGTCCAGTGA
CACCAATGAAGCTGAGCAGGAAGCTGAGACGGCTCAAGTATCAGCGGCAACTCAACAAAC
CAATTAGCAACCTCCCTCTTGCCATCTACTGCTTAATGCTGAAGGCAAGCAGCTCAAGAA
GCACCAGCTGTTACCCAATGCCTGACATGAAGCGCATGTTACGAACGACAGAGTTTCTTT
GCAAATAAGTGCATACAGATGTTGTGTGATAGGAATGTCATCTCATCTGTATTATCTAAA
AATAATGAACGTCATCTGTAGCCATTAAGAAAATTCACGAAGCAACAACTCTGCATATCA
ATAGAGAGCACATATTGGT