Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os11t0127700-01
CDS Infomation

cds chromosome:IRGSP-1.0:11:1274493:1279077:-1 gene:Os11g0127700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os11t0127700-01)
Sequence

ATGGCGGCTGCCTGGGCGGCGGTGGTGGCCGTGATGCTCCTCCTTGCGCAGGTGTCAGCC
GCGGCTCCGGTGATGGGGCCTGCCTTCCTCTGGGCGCCCAAGAACTACGGATTCTCTTCT
GATGAGGCTAAAGAAATAGTCCATTATCAGACAGTATCCCCGAAGAGCTTAGTGAAATCT
GTTCTTGAAGAAGGTGGTTGGTCAAACTTGGTGTGTTCAAGGGAGGATCATGCAAAGAGT
GTTGATGTTGCAGTTCTTTTTCTTGGCTCGAAGCTACAATCGTCAGACATTTCTAAAGAT
AAGCAAGCTGATTCTACTTTAGTAGACACGCTGAAGAACTCGTTTGCAAGCTCCGAGTTT
TCGATGGCATTCCCCTACATTGCCATGTCAGATGATGACAAATTGGAGAAGTCATTGCTA
TCTGGGTTTGCTGAGAATTGCAACAATGGTTTCGGAGATAATCATATCACCTACACAGAC
ACCTGTTCTGTAAGTGAAGATCTGAACAAACATCACAACATGGATTCCATTCATGGATTG
GTGGCATCACAAACTAAAAAGAACCCGAGTGGACAGACTGATCTGATTGTCTTCTGTGAT
GGTGGTTTCAAGGATAACACAAAATCAGAAGGGGAGTTGCTTTCTGAGCTGGTTACTCTG
CTGAAGAAGTCTGGAGCTAAATATACGATTCTTTATGCTTCTCAGCCCTTTGGTTTGCTA
GAGAACCCTTCAAACCTACCATTAGGCAGGTACCTCGCAGAGAAGACCAATACTACTAAA
CCTGGCCGTGGAAAATGTGACGGGGAGTGCTTAGTAAAATCAACTCTGCTGGAAGGAAGC
TTTGTTGGAATAGTGCTGCTGATCATCTTGATATCAGGACTCAAATGTATGATGGGAATT
GATACCCCATCAAAGTTCGACGCTCCCCCGGAATCATAA

Peptide Sequence

PEP ID

Os11t0127700-01
PEP Infomation

pep chromosome:IRGSP-1.0:11:1274493:1279077:-1 gene:Os11g0127700 transcript:Os11t0127700-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os11t0127700-01)
Sequence

MAAAWAAVVAVMLLLAQVSAAAPVMGPAFLWAPKNYGFSSDEAKEIVHYQTVSPKSLVKS
VLEEGGWSNLVCSREDHAKSVDVAVLFLGSKLQSSDISKDKQADSTLVDTLKNSFASSEF
SMAFPYIAMSDDDKLEKSLLSGFAENCNNGFGDNHITYTDTCSVSEDLNKHHNMDSIHGL
VASQTKKNPSGQTDLIVFCDGGFKDNTKSEGELLSELVTLLKKSGAKYTILYASQPFGLL
ENPSNLPLGRYLAEKTNTTKPGRGKCDGECLVKSTLLEGSFVGIVLLIILISGLKCMMGI
DTPSKFDAPPES

Transcript Sequence

Transcript ID

Os11t0127700-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:11:1274493:1279077:-1 gene:Os11g0127700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os11t0127700-01)
Sequence

AACGACGAACAACAACATCTCGCCACGAAGAGGAGGGCGAGAGCCTGCACGAGTCCGAAA
TCCCCAATCCGGGTTCCCTGCTTCTCTTCGCGCCAAGATGGCGGCTGCCTGGGCGGCGGT
GGTGGCCGTGATGCTCCTCCTTGCGCAGGTGTCAGCCGCGGCTCCGGTGATGGGGCCTGC
CTTCCTCTGGGCGCCCAAGAACTACGGATTCTCTTCTGATGAGGCTAAAGAAATAGTCCA
TTATCAGACAGTATCCCCGAAGAGCTTAGTGAAATCTGTTCTTGAAGAAGGTGGTTGGTC
AAACTTGGTGTGTTCAAGGGAGGATCATGCAAAGAGTGTTGATGTTGCAGTTCTTTTTCT
TGGCTCGAAGCTACAATCGTCAGACATTTCTAAAGATAAGCAAGCTGATTCTACTTTAGT
AGACACGCTGAAGAACTCGTTTGCAAGCTCCGAGTTTTCGATGGCATTCCCCTACATTGC
CATGTCAGATGATGACAAATTGGAGAAGTCATTGCTATCTGGGTTTGCTGAGAATTGCAA
CAATGGTTTCGGAGATAATCATATCACCTACACAGACACCTGTTCTGTAAGTGAAGATCT
GAACAAACATCACAACATGGATTCCATTCATGGATTGGTGGCATCACAAACTAAAAAGAA
CCCGAGTGGACAGACTGATCTGATTGTCTTCTGTGATGGTGGTTTCAAGGATAACACAAA
ATCAGAAGGGGAGTTGCTTTCTGAGCTGGTTACTCTGCTGAAGAAGTCTGGAGCTAAATA
TACGATTCTTTATGCTTCTCAGCCCTTTGGTTTGCTAGAGAACCCTTCAAACCTACCATT
AGGCAGGTACCTCGCAGAGAAGACCAATACTACTAAACCTGGCCGTGGAAAATGTGACGG
GGAGTGCTTAGTAAAATCAACTCTGCTGGAAGGAAGCTTTGTTGGAATAGTGCTGCTGAT
CATCTTGATATCAGGACTCAAATGTATGATGGGAATTGATACCCCATCAAAGTTCGACGC
TCCCCCGGAATCATAAGCCCATTTTAAAGCAGTTCTGAATGGAAACTCAGGGCAAGTGCT
AGGGAAAAATTGAATAGCTGATGTAGCAGGAAATGTATTGTGCATATAGTAAGTTCGCTA
CTTGATGCCTTATGTATTTTAATGAGCCAGCTGCAATTTGCAGTCAATTTTTGGTGGAAT
ATTACATTTCAATACGTACAAGTGCAAGCCTTGGGTTGTACCATATAACACTGCCTCCAG
TGTTTGCTGTGTGAATAAGCTGGAATTCAGGACTCCGAGTAGCCAATAAGATGTTATACA
ATTCATCTAATAAAACCTTGTGATTCTTTCAT