Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os11t0125500-01
CDS Infomation

cds chromosome:IRGSP-1.0:11:1162152:1164910:-1 gene:Os11g0125500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein prenyltransferase domain containing protein. (Os11t0125500-01)
Sequence

ATGTTGGGCCACCTCCGGCGATCCTCCCACCGAGTACTCATTGCCAACCTCGCCGTCTAC
TCGATACAGAGTTCACAAATTGAGTTCATAGCAGGCTGGTGTAGCAACCATACCACCAGA
AATTTCTCTGCAGATACAAGTAATAGAGTTTCAAATGATCGAGGGCATCAATCAAGGGAG
TTGAAACCAAGTCTTGTGAAGGATGATGTTGCAATCATCGAACGCATACAAAACAGTACA
AAGGAATTGAGACAAGGCCCAGTTGGGAAAAATCTGTCATCGGCGGAGAAAAGGAAATTT
CTTGTCAACACTCTGCTTGACCTGGAAGATTCAAAAGAAGGTGTTTACAGCACTCTGGAT
GCTTGGGTTGCCTTTGAGCAGGATTTTCCTGTGGCCTCAATAAAGCAAGCACTTGTAGCT
CTTGAAAAGGAGGAACAGTGGCATAGAATCGTCCAGGTGATAAAATGGATGTCGAGCAAA
GGACAAGGGAAGACTATCAGAACATATGAGCAATTAGTGTGTGCACTTGAGAAGGATAAT
AGAGCGGATGAAGCTTGCAGAATCTGGGAGTTTAAGATAGCCCATGATCTACAATCAGTT
CCATGGCGGTTTTGCCGTCTTATGTTGGGTATTTACTACAGAAATAATAAGCTAGATAGA
CTTGTCAAGCTCTTCAAGAATCTTGAAGCATGTGGCCGTAAACCTCCAAGCAAAGATATC
GTACGGAAAGTTGAAGATGCATATGAAATGCTTGGTTTAGTGGAGGAGAAAAAGGAATTG
CTTGAGAAATACAAGGATTTGTTTGACAAGCCATCGAGTAATGACAAAAAGAAAGGCCGG
CAGTTCAAAAAGGTTGAGAAGAACATCAAGCCGGCTTAG

Peptide Sequence

PEP ID

Os11t0125500-01
PEP Infomation

pep chromosome:IRGSP-1.0:11:1162152:1164910:-1 gene:Os11g0125500 transcript:Os11t0125500-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein prenyltransferase domain containing protein. (Os11t0125500-01)
Sequence

MLGHLRRSSHRVLIANLAVYSIQSSQIEFIAGWCSNHTTRNFSADTSNRVSNDRGHQSRE
LKPSLVKDDVAIIERIQNSTKELRQGPVGKNLSSAEKRKFLVNTLLDLEDSKEGVYSTLD
AWVAFEQDFPVASIKQALVALEKEEQWHRIVQVIKWMSSKGQGKTIRTYEQLVCALEKDN
RADEACRIWEFKIAHDLQSVPWRFCRLMLGIYYRNNKLDRLVKLFKNLEACGRKPPSKDI
VRKVEDAYEMLGLVEEKKELLEKYKDLFDKPSSNDKKKGRQFKKVEKNIKPA

Transcript Sequence

Transcript ID

Os11t0125500-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:11:1162152:1164910:-1 gene:Os11g0125500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein prenyltransferase domain containing protein. (Os11t0125500-01)
Sequence

ACACGAATCGGACTTCGGGGGCTCTTCCGCCGCCGCCGCCCCGCCCTCGCCGCCGGCGGC
CCGGACGATGTTGGGCCACCTCCGGCGATCCTCCCACCGAGTACTCATTGCCAACCTCGC
CGTCTACTCGATACAGAGTTCACAAATTGAGTTCATAGCAGGCTGGTGTAGCAACCATAC
CACCAGAAATTTCTCTGCAGATACAAGTAATAGAGTTTCAAATGATCGAGGGCATCAATC
AAGGGAGTTGAAACCAAGTCTTGTGAAGGATGATGTTGCAATCATCGAACGCATACAAAA
CAGTACAAAGGAATTGAGACAAGGCCCAGTTGGGAAAAATCTGTCATCGGCGGAGAAAAG
GAAATTTCTTGTCAACACTCTGCTTGACCTGGAAGATTCAAAAGAAGGTGTTTACAGCAC
TCTGGATGCTTGGGTTGCCTTTGAGCAGGATTTTCCTGTGGCCTCAATAAAGCAAGCACT
TGTAGCTCTTGAAAAGGAGGAACAGTGGCATAGAATCGTCCAGGTGATAAAATGGATGTC
GAGCAAAGGACAAGGGAAGACTATCAGAACATATGAGCAATTAGTGTGTGCACTTGAGAA
GGATAATAGAGCGGATGAAGCTTGCAGAATCTGGGAGTTTAAGATAGCCCATGATCTACA
ATCAGTTCCATGGCGGTTTTGCCGTCTTATGTTGGGTATTTACTACAGAAATAATAAGCT
AGATAGACTTGTCAAGCTCTTCAAGAATCTTGAAGCATGTGGCCGTAAACCTCCAAGCAA
AGATATCGTACGGAAAGTTGAAGATGCATATGAAATGCTTGGTTTAGTGGAGGAGAAAAA
GGAATTGCTTGAGAAATACAAGGATTTGTTTGACAAGCCATCGAGTAATGACAAAAAGAA
AGGCCGGCAGTTCAAAAAGGTTGAGAAGAACATCAAGCCGGCTTAGACATGTGATGGGAC
ACGCCTGCACCTCTAAGCTTAGAGCATAGAACGGAAACATCTGAATAGAAATCTGCCAGT
GAAGTTGTTACTCTTTCCTTTGGGATGAGAATCTGATTATCAACAGTTAAGATTAGAAGT
ATGCATGGTAGTGCAGTTAACATTGTTGTGAGTCATTTTCCTTCGTCCAGATTTGTTGCT
GACAGTGCATCCATATATAATGGGATGAGAACCTAATCTAATGCAGCAAGTAATAGTATT
TGCCGT