Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os11t0124500-01
CDS Infomation

cds chromosome:IRGSP-1.0:11:1128553:1130384:1 gene:Os11g0124500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF607 family protein. (Os11t0124500-01)
Sequence

ATGTGGCGCGCGGCCGCCTACCACCTCCTCCTCCTCCGCCGCGCCGCGCATCCTCCTCCC
TCTCCGGCAACCGCCACAGGGGCGGCCTGCGCGCTCCGCCACGTGCGCCTCTTCTCCCCG
CCTCCGCATCCGCCGTCGTCGCGGCCCACGGAGGCCGAGGCGGAGGTGACGGCGGCGGAG
GCGCGGAGGCTGGTGCGGCTGGTGGGCGTGGAGGCGCTCAAGCGGCGGCTGAGGGACGGG
CGGGAGGAGGTGGTCGGGTACGGGGAGCTCCTGGACGCCTGCGTCGAGGCCGGCGCGGCG
CGCACGCGGCGTGACGCGGAGGCGCTCGCCCGGGCCATGGACGAGGCCGGCGTCGTGCTG
CTGTTCCGCGACAAGGCCTACCTCCACCCCGAGAAGGTGGTTGAGCTTGTTAGAAGAGCT
GTTCCGCTTGCACTCTCACCGGAGAACGATTCAAGAAAAGAAGAGCTGAAGAAGCTCCAG
GAGAAGAAGGAAGAGATCGACAAGCTGGCGCACAAGCAAGTCCGGCGCATCCTGTGGTCT
GGACTAGGTTTCTTCATGTGCCAAGTTGGGCTCTTCTTCCGCCTTACTTTCTGGGAATTT
TCATGGGATGTGATGGAGCCAATTGCCTTCTTCACAACTGCATCTGGCCTGCTCGTTGGT
TACGCATATTTCCTCATTACCTCAAGGGATCCAACATATGAGGACTTCATGGAAAGGTTG
TATTTGTCAAGACACAGAAAGCTTTGTGCCAAGAATAGTTTTGATATGGCAAAGTACCTC
GAGTTGCAGAAGCATTGCAAGTGTCCTCTGGAAGGTCATTATTCCCATAGTTCTAAGTTT
CATGACTTGTAA

Peptide Sequence

PEP ID

Os11t0124500-01
PEP Infomation

pep chromosome:IRGSP-1.0:11:1128553:1130384:1 gene:Os11g0124500 transcript:Os11t0124500-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF607 family protein. (Os11t0124500-01)
Sequence

MWRAAAYHLLLLRRAAHPPPSPATATGAACALRHVRLFSPPPHPPSSRPTEAEAEVTAAE
ARRLVRLVGVEALKRRLRDGREEVVGYGELLDACVEAGAARTRRDAEALARAMDEAGVVL
LFRDKAYLHPEKVVELVRRAVPLALSPENDSRKEELKKLQEKKEEIDKLAHKQVRRILWS
GLGFFMCQVGLFFRLTFWEFSWDVMEPIAFFTTASGLLVGYAYFLITSRDPTYEDFMERL
YLSRHRKLCAKNSFDMAKYLELQKHCKCPLEGHYSHSSKFHDL

Transcript Sequence

Transcript ID

Os11t0124500-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:11:1128553:1130384:1 gene:Os11g0124500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF607 family protein. (Os11t0124500-01)
Sequence

ATTCGGCAACCAACCATGTGGCGCGCGGCCGCCTACCACCTCCTCCTCCTCCGCCGCGCC
GCGCATCCTCCTCCCTCTCCGGCAACCGCCACAGGGGCGGCCTGCGCGCTCCGCCACGTG
CGCCTCTTCTCCCCGCCTCCGCATCCGCCGTCGTCGCGGCCCACGGAGGCCGAGGCGGAG
GTGACGGCGGCGGAGGCGCGGAGGCTGGTGCGGCTGGTGGGCGTGGAGGCGCTCAAGCGG
CGGCTGAGGGACGGGCGGGAGGAGGTGGTCGGGTACGGGGAGCTCCTGGACGCCTGCGTC
GAGGCCGGCGCGGCGCGCACGCGGCGTGACGCGGAGGCGCTCGCCCGGGCCATGGACGAG
GCCGGCGTCGTGCTGCTGTTCCGCGACAAGGCCTACCTCCACCCCGAGAAGGTGGTTGAG
CTTGTTAGAAGAGCTGTTCCGCTTGCACTCTCACCGGAGAACGATTCAAGAAAAGAAGAG
CTGAAGAAGCTCCAGGAGAAGAAGGAAGAGATCGACAAGCTGGCGCACAAGCAAGTCCGG
CGCATCCTGTGGTCTGGACTAGGTTTCTTCATGTGCCAAGTTGGGCTCTTCTTCCGCCTT
ACTTTCTGGGAATTTTCATGGGATGTGATGGAGCCAATTGCCTTCTTCACAACTGCATCT
GGCCTGCTCGTTGGTTACGCATATTTCCTCATTACCTCAAGGGATCCAACATATGAGGAC
TTCATGGAAAGGTTGTATTTGTCAAGACACAGAAAGCTTTGTGCCAAGAATAGTTTTGAT
ATGGCAAAGTACCTCGAGTTGCAGAAGCATTGCAAGTGTCCTCTGGAAGGTCATTATTCC
CATAGTTCTAAGTTTCATGACTTGTAACACCAGGATTGGATTGTCTCTACTGTTGTTACT
TGATAATGTACTCTTTACTTGTAGAATTGATAGAAAAAAACACATGATCAAG