Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os11t0124300-01
CDS Infomation	cds chromosome:IRGSP-1.0:11:1119746:1123350:1 gene:Os11g0124300 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:SCARECROW 1 description:Similar to SCARECROW. (Os11t0124300-01)
Sequence	ATGGGCTCCTCCTCCCTCCTCCTCTTCCCCTCCTCTTCCTCCTCCGCCACCCACTCCTCT TATTCTCCCTCCTCCTCCTCTCATGCCATCACCTCCTTGCTGCCTCCTCTCCCCTCCGAC CACCATCTCCTCCTCTACCTAGACCACCAAGAACAACACCACCTCGCCGCCGCCATGGTC CGCAAGCGCCCCGCCTCCGACATGGACCTGCCACCGCCGCGCCGCCATGTCACCGGCGAC CTGTCCGATGTCACGGCCGCCGCGGCGCCGTCGTCTGCCAGCGCGCAGCTCCCCGCGCTG CCCACGCAGCTCCCGGCGTTCCACCACACGGACATGGACCTCGCCGCGCCCGCGCCGCCG CCGCCGCAGCAGCAGGTGGCGGCGGGTGAGGGTGGGCCGCCTAGTACGGCTTGGGTGGAT GGTATCATCCGTGACATCATCGCCAGCAGCGGCGCCGCGGTCTCCGTCGCGCAGCTCATC CACAACGTGCGTGAGATCATCCGACCTTGTAACCCCGACCTCGCGTCCATCCTCGAGCTC CGCCTCCGCTCTCTCCTCACCTCCGACCCTGCGCCGCCGCCGCCGCCGCCGCCGTCGCAT CCTGCTCTCCTCCCTCCCGACGCCACGGCGCCACCGCCACCCCCCACGTCGGTCGCCGCG CTTCCTCCCCCTCCGCCGCCGCAGCCCGACAAGCGGCGCCGCGAGCCTCAGTGTCAGGAG CAGGAGCCCAACCAGCCGCAGTCGCCGAAGCCCCCCACCGCGGAGGAAACCGCCGCCGCT GCCGCGGCCGCCAAGGAGCGGAAGGAGGAGCAGCGGCGGAAGCAGCGCGACGAGGAGGGC CTCCACCTGCTGACGCTGCTGCTCCAGTGCGCGGAGTCGGTGAACGCGGACAACCTCGAC GAGGCGCACCGCGCGCTGCTGGAGATCGCGGAGCTTGCCACGCCGTTCGGCACATCCACG CAGCGCGTCGCCGCCTACTTCGCGGAGGCCATGTCGGCGCGGCTGGTGAGCTCGTGCCTG GGGCTGTACGCGCCGCTCCCCAACCCGTCCCCGGCGGCGGCGCGTCTCCACGGGCGCGTC GCCGCGGCGTTCCAGGTGTTCAACGGCATCAGCCCGTTCGTGAAGTTCTCGCACTTCACG GCGAACCAGGCGATCCAGGAGGCGTTCGAGAGGGAGGAGAGGGTGCACATCATCGACCTG GACATCATGCAGGGGCTCCAATGGCCGGGGCTGTTCCACATCCTGGCGTCGAGGCCGGGG GGGCCGCCGAGGGTGAGGCTGACCGGGCTGGGGGCGTCCATGGAGGCGCTGGAGGCGACG GGGAAGAGGCTATCGGACTTCGCGGACACGCTGGGATTGCCATTCGAGTTCTGCCCGGTG GCTGACAAGGCCGGGAATCTTGACCCGGAGAAGCTAGGCGTCACGCGCCGCGAGGCCGTC GCCGTCCACTGGCTGCGCCACTCCCTCTACGATGTCACCGGCTCCGACTCCAACACGCTC TGGCTCATCCAGAGGTTGGCGCCAAAGGTTGTAACAATGGTGGAGCAGGATCTGAGCCAC TCAGGCTCCTTCCTGGCACGTTTTGTGGAGGCCATCCACTACTATTCGGCACTGTTCGAC TCGCTTGATGCGAGTTACAGCGAGGATAGCCCGGAGCGGCATGTCGTGGAGCAACAACTC TTGTCACGGGAGATCCGCAATGTGCTAGCCGTGGGCGGTCCAGCACGCACCGGCGATGTT AAGTTTGGGAGCTGGCGCGAGAAGCTTGCGCAGTCGGGCTTCCGTGTGTCGTCGCTTGCT GGAAGTGCCGCTGCTCAGGCCGTGCTGCTGCTTGGGATGTTCCCTTCCGATGGGTACACG CTCATTGAGGAGAATGGCGCCCTGAAGCTTGGATGGAAGGATCTGTGCCTTCTCACTGCC TCTGCTTGGCGCCCAATTCAGGCTTCGGGACGTTAG

Peptide Sequence

PEP ID	Os11t0124300-01
PEP Infomation	pep chromosome:IRGSP-1.0:11:1119746:1123350:1 gene:Os11g0124300 transcript:Os11t0124300-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:SCARECROW 1 description:Similar to SCARECROW. (Os11t0124300-01)
Sequence	MGSSSLLLFPSSSSSATHSSYSPSSSSHAITSLLPPLPSDHHLLLYLDHQEQHHLAAAMV RKRPASDMDLPPPRRHVTGDLSDVTAAAAPSSASAQLPALPTQLPAFHHTDMDLAAPAPP PPQQQVAAGEGGPPSTAWVDGIIRDIIASSGAAVSVAQLIHNVREIIRPCNPDLASILEL RLRSLLTSDPAPPPPPPPSHPALLPPDATAPPPPPTSVAALPPPPPPQPDKRRREPQCQE QEPNQPQSPKPPTAEETAAAAAAAKERKEEQRRKQRDEEGLHLLTLLLQCAESVNADNLD EAHRALLEIAELATPFGTSTQRVAAYFAEAMSARLVSSCLGLYAPLPNPSPAAARLHGRV AAAFQVFNGISPFVKFSHFTANQAIQEAFEREERVHIIDLDIMQGLQWPGLFHILASRPG GPPRVRLTGLGASMEALEATGKRLSDFADTLGLPFEFCPVADKAGNLDPEKLGVTRREAV AVHWLRHSLYDVTGSDSNTLWLIQRLAPKVVTMVEQDLSHSGSFLARFVEAIHYYSALFD SLDASYSEDSPERHVVEQQLLSREIRNVLAVGGPARTGDVKFGSWREKLAQSGFRVSSLA GSAAAQAVLLLGMFPSDGYTLIEENGALKLGWKDLCLLTASAWRPIQASGR

Transcript Sequence

Transcript ID	Os11t0124300-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:11:1119746:1123350:1 gene:Os11g0124300 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:SCARECROW 1 description:Similar to SCARECROW. (Os11t0124300-01)
Sequence	TCCTGCTAACCTCTCCCTCTTGGTCTCCTCCTCTCGGCCTCTTCCTCTTTACTCCGCTTC CCCCTTCGCGCCATCGCCTCGCTTGCGCCGCGCCAAATCCCATAAAAATTCCACCCAACA CAAGCGTTAGGCCTCCCGCGCGCGCCCGTCCGCTCGCCATGCTCGCGGCCGCTTCCCCTT GGCGTTTGTAGATGGGCTCCTCCTCCCTCCTCCTCTTCCCCTCCTCTTCCTCCTCCGCCA CCCACTCCTCTTATTCTCCCTCCTCCTCCTCTCATGCCATCACCTCCTTGCTGCCTCCTC TCCCCTCCGACCACCATCTCCTCCTCTACCTAGACCACCAAGAACAACACCACCTCGCCG CCGCCATGGTCCGCAAGCGCCCCGCCTCCGACATGGACCTGCCACCGCCGCGCCGCCATG TCACCGGCGACCTGTCCGATGTCACGGCCGCCGCGGCGCCGTCGTCTGCCAGCGCGCAGC TCCCCGCGCTGCCCACGCAGCTCCCGGCGTTCCACCACACGGACATGGACCTCGCCGCGC CCGCGCCGCCGCCGCCGCAGCAGCAGGTGGCGGCGGGTGAGGGTGGGCCGCCTAGTACGG CTTGGGTGGATGGTATCATCCGTGACATCATCGCCAGCAGCGGCGCCGCGGTCTCCGTCG CGCAGCTCATCCACAACGTGCGTGAGATCATCCGACCTTGTAACCCCGACCTCGCGTCCA TCCTCGAGCTCCGCCTCCGCTCTCTCCTCACCTCCGACCCTGCGCCGCCGCCGCCGCCGC CGCCGTCGCATCCTGCTCTCCTCCCTCCCGACGCCACGGCGCCACCGCCACCCCCCACGT CGGTCGCCGCGCTTCCTCCCCCTCCGCCGCCGCAGCCCGACAAGCGGCGCCGCGAGCCTC AGTGTCAGGAGCAGGAGCCCAACCAGCCGCAGTCGCCGAAGCCCCCCACCGCGGAGGAAA CCGCCGCCGCTGCCGCGGCCGCCAAGGAGCGGAAGGAGGAGCAGCGGCGGAAGCAGCGCG ACGAGGAGGGCCTCCACCTGCTGACGCTGCTGCTCCAGTGCGCGGAGTCGGTGAACGCGG ACAACCTCGACGAGGCGCACCGCGCGCTGCTGGAGATCGCGGAGCTTGCCACGCCGTTCG GCACATCCACGCAGCGCGTCGCCGCCTACTTCGCGGAGGCCATGTCGGCGCGGCTGGTGA GCTCGTGCCTGGGGCTGTACGCGCCGCTCCCCAACCCGTCCCCGGCGGCGGCGCGTCTCC ACGGGCGCGTCGCCGCGGCGTTCCAGGTGTTCAACGGCATCAGCCCGTTCGTGAAGTTCT CGCACTTCACGGCGAACCAGGCGATCCAGGAGGCGTTCGAGAGGGAGGAGAGGGTGCACA TCATCGACCTGGACATCATGCAGGGGCTCCAATGGCCGGGGCTGTTCCACATCCTGGCGT CGAGGCCGGGGGGGCCGCCGAGGGTGAGGCTGACCGGGCTGGGGGCGTCCATGGAGGCGC TGGAGGCGACGGGGAAGAGGCTATCGGACTTCGCGGACACGCTGGGATTGCCATTCGAGT TCTGCCCGGTGGCTGACAAGGCCGGGAATCTTGACCCGGAGAAGCTAGGCGTCACGCGCC GCGAGGCCGTCGCCGTCCACTGGCTGCGCCACTCCCTCTACGATGTCACCGGCTCCGACT CCAACACGCTCTGGCTCATCCAGAGGTTGGCGCCAAAGGTTGTAACAATGGTGGAGCAGG ATCTGAGCCACTCAGGCTCCTTCCTGGCACGTTTTGTGGAGGCCATCCACTACTATTCGG CACTGTTCGACTCGCTTGATGCGAGTTACAGCGAGGATAGCCCGGAGCGGCATGTCGTGG AGCAACAACTCTTGTCACGGGAGATCCGCAATGTGCTAGCCGTGGGCGGTCCAGCACGCA CCGGCGATGTTAAGTTTGGGAGCTGGCGCGAGAAGCTTGCGCAGTCGGGCTTCCGTGTGT CGTCGCTTGCTGGAAGTGCCGCTGCTCAGGCCGTGCTGCTGCTTGGGATGTTCCCTTCCG ATGGGTACACGCTCATTGAGGAGAATGGCGCCCTGAAGCTTGGATGGAAGGATCTGTGCC TTCTCACTGCCTCTGCTTGGCGCCCAATTCAGGCTTCGGGACGTTAGTACTGAGGGGGAA TTTATAGAGCTGAAGTATCACTTGATCTTACTTAGGTGCAATTACCTAGTCCTTTTGCTT CTTTTAGCTGCTCAATTTGGTCAATTCTGAGAAAAGAAAAATAAAAAAAATTCTGATCAC TAATTGCCAGATCTCCACACGGTGGTAGTTACTGATGTGCAGCTTAGCTTTAGCTTTTAT TCTGTTCATGCTCCAGTTAACCATTCTGTCCAGTTTAGTTTATTTTGCAATTTTGTAGTG CTTAATCCTTGCTGACATTGTTTTGGGGGAACACGCAAAAGGATCCTTACTGACATTAGA GATGCAGTTCTTATCGTATGATCATTGATCACAAAATGAAATATCTGGTGGTTAGTGAGC TCAATTAGATTGTTGATAGTGTAGCATTGTCAATGATCACCAAATAATATTGTTAGTGTC CATCTACTATGAGAATTTACATGTACATTTAAGTTAATGTTCCTAATTTTCTCCAGAAAA TGACTTAGGGTTGATCTGAATGCCAAATTATCAGCAATGAACTAATGATGGGTAGCACAT GAGTTGTGTACTAGAAAGTCAGGATGTTAGTGGTTTTAATTCATGCCATCTAAATCCTGC TAATTCTTTTCTTCTGAAATATTTGAAACCACTGACCTACACTGCTCATTTAGACATTGG TGTATCACTTTTCTAACATTTTTGCATTACAATAATCTTATTATGTAATTCACTTATTCC TGTATCCGGCATCTACTGGATATACATGGTTTTACTTTTT