Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os11t0121000-00
CDS Infomation	cds chromosome:IRGSP-1.0:11:931165:933160:-1 gene:Os11g0121000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Hypothetical conserved gene. (Os11t0121000-00)
Sequence	ATGAGTCGGATACACCCTTCGAATCAACGCCAAGATGCCGCCGCCGCCGCCGCCGCATCA ACGGCAGCAGCGCGAGCGGCGGTGTACACGGTGTGGAAGAGGTCCAGCATGGGCTTCCAG GGCACCGACGGCTTCTCCGTCTACGACCACGCCGGCACCCTCGCCTTCCGTGTTGACAAC TACTCCCGCCGCCGCAAGCTCTTCTCCGGCGACCTGCTGCTCATGGATGGACATGGCTCG CCTCTCCTCGCCCTCACCCCACAGATTATCAGCATGCATGACCAATGGAATTGTTACAGA GCGTCAGAAGAAGGCCAAGGCAAGAGGACAAGATCACAACAACTCTTCTCAATGAGAAAA TGCTCAGTTATGCAAAGCAGTCATGAAGCAGAAGTGCACATGTCAGGATGTACCCATGCT TCGTCAGATCGTACTGGCCATGTTCCAGGCTTCTCAATCGAGGGCAGTTTCAGGAGAAGA AGTTGCAAGATCCGCAACAGCGTCGGTGAGGAAGTCGCAAGGATAACGAGGAAGAAGGCT GGAGCAGCATCGTTGTCACTGACTCTTGCTGAAGATGTTTTCAGTCTTGAGGTCCAACCG AATGTAGATTGTGCGATGATCATGGCTTTCGTCATTGCTCTCGACCGGATCTGCTGGAAG CCATACACACCTATGATCTGTTCTTCATAG

Peptide Sequence

PEP ID	Os11t0121000-00
PEP Infomation	pep chromosome:IRGSP-1.0:11:931165:933160:-1 gene:Os11g0121000 transcript:Os11t0121000-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Hypothetical conserved gene. (Os11t0121000-00)
Sequence	MSRIHPSNQRQDAAAAAAASTAAARAAVYTVWKRSSMGFQGTDGFSVYDHAGTLAFRVDN YSRRRKLFSGDLLLMDGHGSPLLALTPQIISMHDQWNCYRASEEGQGKRTRSQQLFSMRK CSVMQSSHEAEVHMSGCTHASSDRTGHVPGFSIEGSFRRRSCKIRNSVGEEVARITRKKA GAASLSLTLAEDVFSLEVQPNVDCAMIMAFVIALDRICWKPYTPMICSS

Transcript Sequence

Transcript ID	Os11t0121000-00
Transcript Infomation	cdna chromosome:IRGSP-1.0:11:931165:933160:-1 gene:Os11g0121000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Hypothetical conserved gene. (Os11t0121000-00)
Sequence	CTCTCTCTCTCTCTCTCTCTCTGCAGATAGATAGGTAGATCGCATCGCAGCGAGGAAGAA GATCGATGAGTCGGATACACCCTTCGAATCAACGCCAAGATGCCGCCGCCGCCGCCGCCG CATCAACGGCAGCAGCGCGAGCGGCGGTGTACACGGTGTGGAAGAGGTCCAGCATGGGCT TCCAGGGCACCGACGGCTTCTCCGTCTACGACCACGCCGGCACCCTCGCCTTCCGTGTTG ACAACTACTCCCGCCGCCGCAAGCTCTTCTCCGGCGACCTGCTGCTCATGGATGGACATG GCTCGCCTCTCCTCGCCCTCACCCCACAGATTATCAGCATGCATGACCAATGGAATTGTT ACAGAGCGTCAGAAGAAGGCCAAGGCAAGAGGACAAGATCACAACAACTCTTCTCAATGA GAAAATGCTCAGTTATGCAAAGCAGTCATGAAGCAGAAGTGCACATGTCAGGATGTACCC ATGCTTCGTCAGATCGTACTGGCCATGTTCCAGGCTTCTCAATCGAGGGCAGTTTCAGGA GAAGAAGTTGCAAGATCCGCAACAGCGTCGGTGAGGAAGTCGCAAGGATAACGAGGAAGA AGGCTGGAGCAGCATCGTTGTCACTGACTCTTGCTGAAGATGTTTTCAGTCTTGAGGTCC AACCGAATGTAGATTGTGCGATGATCATGGCTTTCGTCATTGCTCTCGACCGGATCTGCT GGAAGCCATACACACCTATGATCTGTTCTTCATAGTTCAAGGTGATGAGCTCTATTTGAC ATGTAGGAAAATAGATGTTTCAATTCAAGTGAAATCGACGAATTAACTCAAGAAGCTAGT ATGAGACTGTAGTCACTAATTGTACTGTCGATTGACTGGGACTAACATAACATGTAACTT GTTCTAAATTTGACTACTTAAGAAAGGAAGATCGAATTTGCAGATTG