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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os11t0120300-01
CDS Infomation

cds chromosome:IRGSP-1.0:11:896134:897260:-1 gene:Os11g0120300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF567 family protein. (Os11t0120300-01)
Sequence

ATGGCCGCCAAGGTGCATCCTAACGTCGCCGCCGCGCCACAGCCACCCTGCATTAGCAGC
ATCGTCTCCCAACAACAAGAAGAAGAGGAGCCCCCGGTGGTGCTCACGGTGTGGCGCAAG
TCTCTCCTCTTCAACTGCCACGGCTTCACCGTCTTCGACGCCAAGGGCAACCTCGCCTTC
CGCCTCGACTGCTACGACTCCACCAGCTCAAGGCGCGCCGACCTCGTCCTCATGGACGCC
GCCGGCAAGCCGCTCCTCACCATCCGCCGCAAGAGGATGAGCCTCTCCGACAGCTGGATC
ATCTACGACGGCGACGGCGCCGCCACCTCCACCGCCACGCCGCTCCTCTCCGTGCGCCGC
CGCCGCGTCGGCCTCCGCGCCTCCAAGTCCAAGGCCATCGCGCACGTCACGCCGCTCTCC
TCCTCCCTGCCGCTCCCGGAGGCCTACGTGGTGGAGGGCTCGTACGGGCGCCGGAGCTGC
GCGGTGCGCGACGCGCGCGGGGACGCCGTGGCGGAGGTGAGGCGGAAGGAGTCGGTCGGG
GACGACGTGTTCCGCCTCGTGGCGCAGCCCCGCCTGGGCGCGCCGCTCGCCATGGCCATC
GTCATCGCCATCGACGAGATGTTCCGCGGCGGCAGCTCGCTGCTACGGAGGACTTGCTCC
GCCTAG

Peptide Sequence

PEP ID

Os11t0120300-01
PEP Infomation

pep chromosome:IRGSP-1.0:11:896134:897260:-1 gene:Os11g0120300 transcript:Os11t0120300-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF567 family protein. (Os11t0120300-01)
Sequence

MAAKVHPNVAAAPQPPCISSIVSQQQEEEEPPVVLTVWRKSLLFNCHGFTVFDAKGNLAF
RLDCYDSTSSRRADLVLMDAAGKPLLTIRRKRMSLSDSWIIYDGDGAATSTATPLLSVRR
RRVGLRASKSKAIAHVTPLSSSLPLPEAYVVEGSYGRRSCAVRDARGDAVAEVRRKESVG
DDVFRLVAQPRLGAPLAMAIVIAIDEMFRGGSSLLRRTCSA

Transcript Sequence

Transcript ID

Os11t0120300-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:11:896134:897260:-1 gene:Os11g0120300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF567 family protein. (Os11t0120300-01)
Sequence

ATTCCCCAACCCCAACCATTCCTATTTCTAAACAACACACCTCCTCTGCACTTGCTCCTT
CTCTTCTTCTGTCCATCGAATCGACAAGAAGAAATTTACAAGCAAGAATGGCCGCCAAGG
TGCATCCTAACGTCGCCGCCGCGCCACAGCCACCCTGCATTAGCAGCATCGTCTCCCAAC
AACAAGAAGAAGAGGAGCCCCCGGTGGTGCTCACGGTGTGGCGCAAGTCTCTCCTCTTCA
ACTGCCACGGCTTCACCGTCTTCGACGCCAAGGGCAACCTCGCCTTCCGCCTCGACTGCT
ACGACTCCACCAGCTCAAGGCGCGCCGACCTCGTCCTCATGGACGCCGCCGGCAAGCCGC
TCCTCACCATCCGCCGCAAGAGGATGAGCCTCTCCGACAGCTGGATCATCTACGACGGCG
ACGGCGCCGCCACCTCCACCGCCACGCCGCTCCTCTCCGTGCGCCGCCGCCGCGTCGGCC
TCCGCGCCTCCAAGTCCAAGGCCATCGCGCACGTCACGCCGCTCTCCTCCTCCCTGCCGC
TCCCGGAGGCCTACGTGGTGGAGGGCTCGTACGGGCGCCGGAGCTGCGCGGTGCGCGACG
CGCGCGGGGACGCCGTGGCGGAGGTGAGGCGGAAGGAGTCGGTCGGGGACGACGTGTTCC
GCCTCGTGGCGCAGCCCCGCCTGGGCGCGCCGCTCGCCATGGCCATCGTCATCGCCATCG
ACGAGATGTTCCGCGGCGGCAGCTCGCTGCTACGGAGGACTTGCTCCGCCTAGACCACAT
CTCTTCCTTTCCTTGCTTGCTGGGATAAGAAGCTCGGGGTCCCACCTGTCAGCGACTCAG
CAGCAGAGTCTACCTAGATGCAAAGCACTAAACACCCAGGCAAACAACAGAGGAATTTAC
ATCTATATCTTGTTTAGTTGTAGCTAGCTACTGGTTGGTTAAGAATCATCCATGTTAATA
GGAAAATTAAGCAGGATTAATACAGGCTTGTGAAAGTAAAGCACAAGTAGGACAGTACAT
ATATACAGCTACAGGGGAGTTCATTTTTTTCTTCCCCGGATGTAATATTACAAAGATTAT
TGTTTATTATTAGATGGAGAAATGGAACTGCTTCTCCTTTTCCTTCC