Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os11t0120100-01
CDS Infomation	cds chromosome:IRGSP-1.0:11:886242:887578:-1 gene:Os11g0120100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Harpin-induced protein 1 containing protein, expressed. (Os11t0120100-01)
Sequence	ATGGCCTCCACCACCGCCGCCGCCGCCGGCAACGGCAGCGGCAGCATCCTCCCCACCCAC ACCATCGCCGCCACGGCGCCACCCTTCAGAACCCACAAGGACGCCGACCTGGAATCCAGG AGGCGACGGCGCCGGCGACGCTGCCTGTGCTGCTGCCTGCTCGTCACCCTGGTGGTACTA CTCGTGCTGGCCATCACCCTCCTGGTCCTCTTCCTCACGGTGCTCCGCGTCCGCGACCCC ACCACCCGCCTCGTCTCCACCCGCCTCATCGGCCTCTCCCCGCGCCTCTCCTTCCCGGCC ATGTCGGTCCAGCTCAACGTCACGCTCCTCATCACCGTGGCGGTGCACAACCCCAACCCG GCCTCCTTCACCTACGCCACGGGGGGCCACACCGACCTCACCTACAGGGGCGCCCACGTC GGCGACGCCGAGATCGACCCGGGCCGAATCCCGAGCCGTGGGGACGCCAACGTCACCATG GCGCTCACCCTCCAGGCCGACCGCTTCGCCGGCGACCTCACGCAGCTCGTGACGGACGTG ATGGGCGGGTCGGTGGCGCTGGAGGCGAGCACTCGGATCCCCGGGAGGGTGGCCATCCTG GGCGTGTTCAAGCGCCACGCGGTGGCGTACTCGGATTGCCATTTCGTGTTCGGCGTCACG GAGATGGCCGTGCGTAGCCAGCAGTGCAGCGACCGCACCAAGCTCTGA

Peptide Sequence

PEP ID	Os11t0120100-01
PEP Infomation	pep chromosome:IRGSP-1.0:11:886242:887578:-1 gene:Os11g0120100 transcript:Os11t0120100-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Harpin-induced protein 1 containing protein, expressed. (Os11t0120100-01)
Sequence	MASTTAAAAGNGSGSILPTHTIAATAPPFRTHKDADLESRRRRRRRRCLCCCLLVTLVVL LVLAITLLVLFLTVLRVRDPTTRLVSTRLIGLSPRLSFPAMSVQLNVTLLITVAVHNPNP ASFTYATGGHTDLTYRGAHVGDAEIDPGRIPSRGDANVTMALTLQADRFAGDLTQLVTDV MGGSVALEASTRIPGRVAILGVFKRHAVAYSDCHFVFGVTEMAVRSQQCSDRTKL

Transcript Sequence

Transcript ID	Os11t0120100-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:11:886242:887578:-1 gene:Os11g0120100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Harpin-induced protein 1 containing protein, expressed. (Os11t0120100-01)
Sequence	AGCAATACTCTCCTCATTAACTTCTTCCGCGGGACGAGACACGAGAGAGAGAGAGAGAGA GAGAGAGCCAACCGCACACTACTTGAATCCAATCCAATCGAATCAAATTACTAGCCTCTC TTCCACGCCACGCACACGCACCCAATCCTCTATCGATCGAGACATGGCCTCCACCACCGC CGCCGCCGCCGGCAACGGCAGCGGCAGCATCCTCCCCACCCACACCATCGCCGCCACGGC GCCACCCTTCAGAACCCACAAGGACGCCGACCTGGAATCCAGGAGGCGACGGCGCCGGCG ACGCTGCCTGTGCTGCTGCCTGCTCGTCACCCTGGTGGTACTACTCGTGCTGGCCATCAC CCTCCTGGTCCTCTTCCTCACGGTGCTCCGCGTCCGCGACCCCACCACCCGCCTCGTCTC CACCCGCCTCATCGGCCTCTCCCCGCGCCTCTCCTTCCCGGCCATGTCGGTCCAGCTCAA CGTCACGCTCCTCATCACCGTGGCGGTGCACAACCCCAACCCGGCCTCCTTCACCTACGC CACGGGGGGCCACACCGACCTCACCTACAGGGGCGCCCACGTCGGCGACGCCGAGATCGA CCCGGGCCGAATCCCGAGCCGTGGGGACGCCAACGTCACCATGGCGCTCACCCTCCAGGC CGACCGCTTCGCCGGCGACCTCACGCAGCTCGTGACGGACGTGATGGGCGGGTCGGTGGC GCTGGAGGCGAGCACTCGGATCCCCGGGAGGGTGGCCATCCTGGGCGTGTTCAAGCGCCA CGCGGTGGCGTACTCGGATTGCCATTTCGTGTTCGGCGTCACGGAGATGGCCGTGCGTAG CCAGCAGTGCAGCGACCGCACCAAGCTCTGATTGATCATGTGATTCCAACTTAATTTGCA AGTTTCCAAGCACGCAACGTAAGGTGGGCATGCCACATCGCGACGTGGGACAAGACGAGA AGCCATATTTTGTTGTTTTGTTTACACCACGCAACTGCTACTAGAAGTACATAGAGTATT ACTATATTCTACACGGGTGGCACATTAGTTCGTTATTACAGATAGTATAAGATCAGGAAT TCAGGATTCAGGACTTCCGATTTTCTTCAGTATTTCTTGATGGGTGTTGGGATTGATTCG ATTCATGTATATAACACGGTGTGTCAGTTTTGACATATACGTACATATACAGTATTTCAC TATTCTCATGTTTACTAGCTACTAATCCAAAAATTCCTAATCCAAAGCACCAAACTTCAG TTTAACTTTAACAGACCTTTCTCCACAGCATGCCCACAGCGGCAAACTGCCAGCACACAC AAAACTAGGCCCGGCGC