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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os11t0116900-01
CDS Infomation

cds chromosome:IRGSP-1.0:11:759592:763326:-1 gene:Os11g0116900 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:WRKY GENE 46 description:Similar to WRKY DNA binding domain containing protein, expressed. (Os11t0116900-01)
Sequence

ATGGCACTCGACTCTGTTCCATCCTACCCCAGCGATCTTGGATCCAGCAGGGCCAGGACG
CCGCAGCAGCAAAGGGTCAGCCCCAGGAAGGAGGAGCGGACATGGACGACCGACACCTAC
GCGCCGTACGACGACGGCCACCAGTGGAGGAAGTACGGCGAGAAGAAACTCTCCAATTCC
AACTTCCCAAGGTTCTATTACAGATGCACCTACAAGAATGACATGAAGTGCCCTGCTACG
AAGCAAGTCCAGCAGAAGGACACTAATGATCCACCATTGTTCTCAGTCACTTACTTCAAC
CACCACACCTGCAACAGCAGCTCAAAGATCGTAGGCAGCACTCCTGATTCTACTGTGCAG
TCGAGGAAAGCCATTTCGATCTGCTTCAATTCACATGGCCAAACCGGTGAACAGCCCACA
TTCTTGTCATCATCAGCTTCCTTGTTGTCACCGAGCATGCAGTCGTACAGTTCCAACCAG
CAACCTGACATGAACACCTACAGTCGCCAGTTTCAGTGGGCAGACACATCGTCATCTACA
AGCAATGCTCCGGTTAAGATGGAGGCGGACGATTATGCAGAAGCAAGTGCTTCACCCAGT
ACCACTGGTGCTCTGTCGAGGACATTGCTGCCGATCGGTCAGTCAAGATGCATCGAGTAT
TTCCATTTCTTGTGA

Peptide Sequence

PEP ID

Os11t0116900-01
PEP Infomation

pep chromosome:IRGSP-1.0:11:759592:763326:-1 gene:Os11g0116900 transcript:Os11t0116900-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:WRKY GENE 46 description:Similar to WRKY DNA binding domain containing protein, expressed. (Os11t0116900-01)
Sequence

MALDSVPSYPSDLGSSRARTPQQQRVSPRKEERTWTTDTYAPYDDGHQWRKYGEKKLSNS
NFPRFYYRCTYKNDMKCPATKQVQQKDTNDPPLFSVTYFNHHTCNSSSKIVGSTPDSTVQ
SRKAISICFNSHGQTGEQPTFLSSSASLLSPSMQSYSSNQQPDMNTYSRQFQWADTSSST
SNAPVKMEADDYAEASASPSTTGALSRTLLPIGQSRCIEYFHFL

Transcript Sequence

Transcript ID

Os11t0116900-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:11:759592:763326:-1 gene:Os11g0116900 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:WRKY GENE 46 description:Similar to WRKY DNA binding domain containing protein, expressed. (Os11t0116900-01)
Sequence

CGCCTTCTTCTTCCTCTCCCTCTTCCCTACCAAGCGAGACCACTCGGCCCCCACAAAATC
TCCGCTTCTTCTCCGAGACCGAGATGGCACTCGACTCTGTTCCATCCTACCCCAGCGATC
TTGGATCCAGCAGGGCCAGGACGCCGCAGCAGCAAAGGGTCAGCCCCAGGAAGGAGGAGC
GGACATGGACGACCGACACCTACGCGCCGTACGACGACGGCCACCAGTGGAGGAAGTACG
GCGAGAAGAAACTCTCCAATTCCAACTTCCCAAGGTTCTATTACAGATGCACCTACAAGA
ATGACATGAAGTGCCCTGCTACGAAGCAAGTCCAGCAGAAGGACACTAATGATCCACCAT
TGTTCTCAGTCACTTACTTCAACCACCACACCTGCAACAGCAGCTCAAAGATCGTAGGCA
GCACTCCTGATTCTACTGTGCAGTCGAGGAAAGCCATTTCGATCTGCTTCAATTCACATG
GCCAAACCGGTGAACAGCCCACATTCTTGTCATCATCAGCTTCCTTGTTGTCACCGAGCA
TGCAGTCGTACAGTTCCAACCAGCAACCTGACATGAACACCTACAGTCGCCAGTTTCAGT
GGGCAGACACATCGTCATCTACAAGCAATGCTCCGGTTAAGATGGAGGCGGACGATTATG
CAGAAGCAAGTGCTTCACCCAGTACCACTGGTGCTCTGTCGAGGACATTGCTGCCGATCG
GTCAGTCAAGATGCATCGAGTATTTCCATTTCTTGTGATGATTTTTATGGAAAGTGAAGG
AGATGCATATACATTCTGAGGAGCCTCTTGGATGGTTCCAGATAGGGTTTTATATTGGGA
GGTGAGGATGTTGTGCTGATGAGATTCCATATACTATAGTGGCATTATGTTGTTTTCTTC
TTTGCATGTAGATTCAAGCCAGATTTTTGTGCTTGAATGATGTAAAGAACTGAATTGGCG
TTTCTCTATCTAGTAGGAAGGAGTACGTGATACAGAAAAAGGCAAATGTAGCAGAACCTG
TTAAATTATACTAGTATAAAATTAAGGAAAAATCTGACAGT