Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os11t0116000-01
CDS Infomation	cds chromosome:IRGSP-1.0:11:715445:716478:1 gene:Os11g0116000 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:non-specific lipid transfer protein 1.12, lipid transfer protein 1.12, type 1 non-specific lipid transfer protein 12 description:Similar to Nonspecific lipid-transfer protein 1 (LTP 1) (Major allergen Pru d 3). (Os11t0116000-01);Non-protein coding transcript. (Os11t0116000-02)
Sequence	ATGGCGGCTTTGAACGGTAAGGTGGTGGTGGCGGTGATGGTGGTGGCGATGGTGGTGGCG GCGCCGGGGGCGTCGGCGGCGATCACGTGCGGGCAGGTGGGGTCGGCGATCGCGCCGTGC ATCTCGTACGTGACGGGGAGGGGCGGCCTCACCCAGGGATGCTGCAACGGCGTCAAGGGG CTGAACAACGCCGCCCGCACCACCGCCGACCGCCAGGCCGCCTGCCGGTGCCTCAAGACC CTCGCCGGCACCATCAAGTCTCTCAACCTCGGCGCCGCCGCCGGCATCCCCGGCAAGTGC GGCGTCAACGTCGGCTTCCCCATCAGCCTCTCCACTGACTGCAGCAAGGTCAGCTAG

Peptide Sequence

PEP ID	Os11t0116000-01
PEP Infomation	pep chromosome:IRGSP-1.0:11:715445:716478:1 gene:Os11g0116000 transcript:Os11t0116000-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:non-specific lipid transfer protein 1.12, lipid transfer protein 1.12, type 1 non-specific lipid transfer protein 12 description:Similar to Nonspecific lipid-transfer protein 1 (LTP 1) (Major allergen Pru d 3). (Os11t0116000-01);Non-protein coding transcript. (Os11t0116000-02)
Sequence	MAALNGKVVVAVMVVAMVVAAPGASAAITCGQVGSAIAPCISYVTGRGGLTQGCCNGVKG LNNAARTTADRQAACRCLKTLAGTIKSLNLGAAAGIPGKCGVNVGFPISLSTDCSKVS

Transcript Sequence

Transcript ID	Os11t0116000-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:11:715445:716478:1 gene:Os11g0116000 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:non-specific lipid transfer protein 1.12, lipid transfer protein 1.12, type 1 non-specific lipid transfer protein 12 description:Similar to Nonspecific lipid-transfer protein 1 (LTP 1) (Major allergen Pru d 3). (Os11t0116000-01);Non-protein coding transcript. (Os11t0116000-02)
Sequence	ATCGATCACCGGCGACGAGAGACACTCTCACTGAACGAAGCTACCTAGCTTAATTACCTA GCTACTCGATCGATCATCAGTCTAGATATGGCGGCTTTGAACGGTAAGGTGGTGGTGGCG GTGATGGTGGTGGCGATGGTGGTGGCGGCGCCGGGGGCGTCGGCGGCGATCACGTGCGGG CAGGTGGGGTCGGCGATCGCGCCGTGCATCTCGTACGTGACGGGGAGGGGCGGCCTCACC CAGGGATGCTGCAACGGCGTCAAGGGGCTGAACAACGCCGCCCGCACCACCGCCGACCGC CAGGCCGCCTGCCGGTGCCTCAAGACCCTCGCCGGCACCATCAAGTCTCTCAACCTCGGC GCCGCCGCCGGCATCCCCGGCAAGTGCGGCGTCAACGTCGGCTTCCCCATCAGCCTCTCC ACTGACTGCAGCAAGGTCAGCTAGATCGATTAATCCTGCTTGGACCGACCGATCGATATA TCGATCGATGCTGGCTCGCAGTTGATCAACTAGCCAAAATAATAGCTACAGTAAAAATAA CAGCTGGGGCATATCAATGCAGCGCTGGTCATCTCTCTCTCTATCTCTGTATACTTTATG TTGCACGCTCCGTGCGTGCATGCTATCTTAATTTTCTTGACTCTGTACACCGCTCTGTGT ACGTGTAATCCTACGTTGATGAATTGCATCTTGTCCAGACTTGGACCTAGCTAACTACGT ACTCCAGCTTGGCAGCTTCTTGCCGAGGCAATCTGTAGTAATTTCCTTGTTACATTCCCC TGTCCCCTCTACTCCCTCTATCCCATAAAAACAAACCTAATATACTAAATATGACACATA TATTCTAGTACTACAAATCTAGACAGATGTATATTTAGATTTGTTATACTAGAATATGTC ACATCCAGTCTTATGTTCGTTTTTTTGG