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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os11t0115350-01
CDS Infomation

cds chromosome:IRGSP-1.0:11:693326:694254:1 gene:Os11g0115350 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:LTP2-A description:Similar to Non-specific lipid-transfer protein 2. (Os11t0115350-01)
Sequence

ATGGCCCGTGCACAGCTGGTGTTGGTCGCCCTCGTGGCAGCGGCTCTGCTCCTGGCGGGC
CCACACACCACCATGGCCGCCATCAGCTGCGGCCAGGTCAACTCCGCCGTGTCGCCCTGC
CTCAGCTACGCCCGCGGCGGCTCCGGCCCGTCGGCGGCCTGCTGCAGCGGCGTCAGGAGC
CTCAACTCCGCCGCCAGCACCACCGCCGACCGCCGCACCGCCTGCAACTGCCTCAAGAAC
GTGGCCGGCAGCATCAGCGGCCTCAACGCCGGCAATGCCGCCAGCATCCCCTCCAAGTGC
GGCGTCAGCATCCCCTACACCATCAGCCCCTCCATCGACTGCTCCAGCGTGAACTAA

Peptide Sequence

PEP ID

Os11t0115350-01
PEP Infomation

pep chromosome:IRGSP-1.0:11:693326:694254:1 gene:Os11g0115350 transcript:Os11t0115350-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:LTP2-A description:Similar to Non-specific lipid-transfer protein 2. (Os11t0115350-01)
Sequence

MARAQLVLVALVAAALLLAGPHTTMAAISCGQVNSAVSPCLSYARGGSGPSAACCSGVRS
LNSAASTTADRRTACNCLKNVAGSISGLNAGNAASIPSKCGVSIPYTISPSIDCSSVN

Transcript Sequence

Transcript ID

Os11t0115350-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:11:693326:694254:1 gene:Os11g0115350 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:LTP2-A description:Similar to Non-specific lipid-transfer protein 2. (Os11t0115350-01)
Sequence

ATCGATCGATCTCACCTGCAGCAGCAAACGAGCACCACACACCAGCAGCAGCAGCAAGTC
GATCGATCGTCAGCACACACGACCAAGATCGAGATGGCCCGTGCACAGCTGGTGTTGGTC
GCCCTCGTGGCAGCGGCTCTGCTCCTGGCGGGCCCACACACCACCATGGCCGCCATCAGC
TGCGGCCAGGTCAACTCCGCCGTGTCGCCCTGCCTCAGCTACGCCCGCGGCGGCTCCGGC
CCGTCGGCGGCCTGCTGCAGCGGCGTCAGGAGCCTCAACTCCGCCGCCAGCACCACCGCC
GACCGCCGCACCGCCTGCAACTGCCTCAAGAACGTGGCCGGCAGCATCAGCGGCCTCAAC
GCCGGCAATGCCGCCAGCATCCCCTCCAAGTGCGGCGTCAGCATCCCCTACACCATCAGC
CCCTCCATCGACTGCTCCAGCGTGAACTAATCTGATCGATCGATCGCTACCGGCCGGAGG
GTGTGACATCGCAGGCCGTACATGCACCTGTCGTCGTCTCACGCTTTGTATCTTGTGTTA
TCTGTGTTTATGCTGAATAAAATGAGAGCTAGCTAGCTAGGTCGATCGATCGATCGCCAT
GCATGACGAGACTAGCTAGCATTGCTGCTAGATCGATGCATGCATATGGTTGATCGCCCG
GTCACTACGCTATCTGTTTCCTTAATTTATTCGTCGATCGACTACGTACGTACCTGAGAG
CTAGAGATCAGTTTTTGTACCATGCATATGCATATGAACTTCTGCATGTACATGCAGTAC
TACTTGTACTACGTGCGTGTACGTTGTGGATTATACATTATATAGACAGCTTCTTTTGGT