Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os11t0114150-01
CDS Infomation

cds chromosome:IRGSP-1.0:11:646980:649063:1 gene:Os11g0114150 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF641, plant domain containing protein. (Os11t0114150-01)
Sequence

ATGGAGTCAAGAACACCAAGAAGTTCAGTTGCAAGGAGCACCTGTAATGTTCCTGGACTC
GTATTAGGCTTCTCCAAGCTCTGCAAAATCACAAAGATTTGTGCCGCGCCTGAATTTGCT
GACACGAAGACAGAATTTGGAGATTATTGTGGCGGATATGATCAGAGGCTAATTATCACA
AGACTGTTTGAGGAAATCGGAGCTCTCAAGTCAGCCTACATCAAGCTGCAGAAAGCCCAT
ATCCCTTATAATCCTCCAAAGATAGCCTTCGCCGACGAGATCATCACCTCCGAGCTCGAC
TCGGTCACTGCTCTTCAGAGCTTATGCAGTTGGAATGGCAGCGTCGGGTCACTGATCAAC
GATCGATGGTCGCTGGTGCAGGAACTGGAAGCTGAGACGAGGAAGAAAGATTCAGACATT
ATGCTGTTGAGAAGAGAGCTGGATGGTCTGAAGAGTGCCAATTCGAGACTGAATAAACAG
ATCAGTAGCAGCAAACCATCAGTTAACCATCATAAGGATTACTCCGTTGTCCTGAAAAAG
TTGACGACACCCAGTGCAGTCTTGGAGCTGTTCAAGGTTGCATCGACATCGGTGCATGAT
TTCGCAGAGCTGATCTTTAGCTTGATTTCCTCATCTGATCATCATTGCACCAACAATGCA
GACGAACATTCACCATACAAGAGGTACTCGCTGGAAGCTTACCTGTCACGAACAATGCTT
GCAGTACATGATGGTGCTGAAGATGATGACGAACTCGATCTTGCTCGCTTCGATCGGATC
ATGAGGTGCTGTGACCCTCTTGACGCGTTGATGGCGCATCCAAACTCCAGCTTCGCGAGA
TTCTGTCGAACAAAGTATTTAGCGGCCGTGCCGTCAGAGATGGAGGCAGCGATGTTCAGA
AACAATCTGGACGTGAGGGCGTTCGTGTCGCGAGGCGGGCACCTGAGGACGTGGTTCTAC
AGGGCGTTCGCGACGATGGCGAGGTCGGCGTGGGCGCTGCAGGTGGCGGTGACGGCGCAC
CGGCGATGTTGTGGCCGTGGAAGTGTGAGGATGTTGTACGCGAGGAGAGGGAGCAGGTAC
GCGGCGGAGTACATGGACAGCGTCGTGGCCGCCGCCGCCGCCGATGCTGGTCGTGGCGGA
GGAGATGGAGTTGCGTTCACCGTGACGCCGGGGATGAAGGTGGGTGAGACCATGGTGGCG
TGCAGAGTGTTCCTCTGTCACGAACAACAAGACACTATTTCTGATGAAACTGATCCCAAA
TTCAGATAG

Peptide Sequence

PEP ID

Os11t0114150-01
PEP Infomation

pep chromosome:IRGSP-1.0:11:646980:649063:1 gene:Os11g0114150 transcript:Os11t0114150-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF641, plant domain containing protein. (Os11t0114150-01)
Sequence

MESRTPRSSVARSTCNVPGLVLGFSKLCKITKICAAPEFADTKTEFGDYCGGYDQRLIIT
RLFEEIGALKSAYIKLQKAHIPYNPPKIAFADEIITSELDSVTALQSLCSWNGSVGSLIN
DRWSLVQELEAETRKKDSDIMLLRRELDGLKSANSRLNKQISSSKPSVNHHKDYSVVLKK
LTTPSAVLELFKVASTSVHDFAELIFSLISSSDHHCTNNADEHSPYKRYSLEAYLSRTML
AVHDGAEDDDELDLARFDRIMRCCDPLDALMAHPNSSFARFCRTKYLAAVPSEMEAAMFR
NNLDVRAFVSRGGHLRTWFYRAFATMARSAWALQVAVTAHRRCCGRGSVRMLYARRGSRY
AAEYMDSVVAAAAADAGRGGGDGVAFTVTPGMKVGETMVACRVFLCHEQQDTISDETDPK
FR

Transcript Sequence

Transcript ID

Os11t0114150-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:11:646980:649063:1 gene:Os11g0114150 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF641, plant domain containing protein. (Os11t0114150-01)
Sequence

ATTTCTTGTCCTTCATTGTACTACTGCTCCTGCTTGCTCTTTCGCTTTCCTCTCTGCATA
GCAGGCAGCAGCAGCAGCAGCTTCAGACTTGGTCACTCTACACCAATTCAATTCAGCATT
TCACTTGTCAGTCCCAGCCTCCCTCTCCCAGAGTCCCAGCCCCAATGGAGTCAAGAACAC
CAAGAAGTTCAGTTGCAAGGAGCACCTGTAATGTTCCTGGACTCGTATTAGGCTTCTCCA
AGCTCTGCAAAATCACAAAGATTTGTGCCGCGCCTGAATTTGCTGACACGAAGACAGAAT
TTGGAGATTATTGTGGCGGATATGATCAGAGGCTAATTATCACAAGACTGTTTGAGGAAA
TCGGAGCTCTCAAGTCAGCCTACATCAAGCTGCAGAAAGCCCATATCCCTTATAATCCTC
CAAAGATAGCCTTCGCCGACGAGATCATCACCTCCGAGCTCGACTCGGTCACTGCTCTTC
AGAGCTTATGCAGTTGGAATGGCAGCGTCGGGTCACTGATCAACGATCGATGGTCGCTGG
TGCAGGAACTGGAAGCTGAGACGAGGAAGAAAGATTCAGACATTATGCTGTTGAGAAGAG
AGCTGGATGGTCTGAAGAGTGCCAATTCGAGACTGAATAAACAGATCAGTAGCAGCAAAC
CATCAGTTAACCATCATAAGGATTACTCCGTTGTCCTGAAAAAGTTGACGACACCCAGTG
CAGTCTTGGAGCTGTTCAAGGTTGCATCGACATCGGTGCATGATTTCGCAGAGCTGATCT
TTAGCTTGATTTCCTCATCTGATCATCATTGCACCAACAATGCAGACGAACATTCACCAT
ACAAGAGGTACTCGCTGGAAGCTTACCTGTCACGAACAATGCTTGCAGTACATGATGGTG
CTGAAGATGATGACGAACTCGATCTTGCTCGCTTCGATCGGATCATGAGGTGCTGTGACC
CTCTTGACGCGTTGATGGCGCATCCAAACTCCAGCTTCGCGAGATTCTGTCGAACAAAGT
ATTTAGCGGCCGTGCCGTCAGAGATGGAGGCAGCGATGTTCAGAAACAATCTGGACGTGA
GGGCGTTCGTGTCGCGAGGCGGGCACCTGAGGACGTGGTTCTACAGGGCGTTCGCGACGA
TGGCGAGGTCGGCGTGGGCGCTGCAGGTGGCGGTGACGGCGCACCGGCGATGTTGTGGCC
GTGGAAGTGTGAGGATGTTGTACGCGAGGAGAGGGAGCAGGTACGCGGCGGAGTACATGG
ACAGCGTCGTGGCCGCCGCCGCCGCCGATGCTGGTCGTGGCGGAGGAGATGGAGTTGCGT
TCACCGTGACGCCGGGGATGAAGGTGGGTGAGACCATGGTGGCGTGCAGAGTGTTCCTCT
GTCACGAACAACAAGACACTATTTCTGATGAAACTGATCCCAAATTCAGATAGCAGATGG
ATTGTGCTGTACTAGAGTTCGCTTTAATTTTGGCCATGCAGTTGTACTGAAAAAAGAATG
TCGAACATAACATGTTGTATACTGTAGTATTCTGCAATATGTCACTGAACATGTTGTATA
TTGTAGTATTCTGCAATATGTCACTGTATGTAGTAATTCTGTATTGATTAATTGGCTGAT
T