Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os11t0112800-01
CDS Infomation

cds chromosome:IRGSP-1.0:11:592270:594666:1 gene:Os11g0112800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Saposin-like domain containing protein. (Os11t0112800-01)
Sequence

ATGGATTTCAAAGTTGCTTCCTTTCTCCTACTCCTGTTAATCGTCACCTGCGGAGCTGCT
CAAGGTCAAGGCAACGATTTTGTTGTCCTTGATCTAAAAACAACTGAGATCGGGGAAGAT
GCTAGCCCAATGTACAAGGAGCAAATTGCGTCGACCAAGATACCTGTAACTCTTCTGAGG
AGCAAGCACAGCTCACTGTGCTCGGCTTGTGAAAACATCACAAGTGAAGCTGTCAATTTT
CTTAGTGAAAAACAAATACAAGATAAGATAAGGACGATCCTTCATGACACTTGTTCTCAG
ACATTCTCCTTTGAGCAAAAGTGTCTTGAGACTATGGACTCCTATGCAACTCTTGTCTTT
GCAAAAATTGCTGAGATCAAGCCAGCTGCGTTCTGCAAACATGCAAGAGGATGGTTCTGC
AGTACGTACCGCTGGTTCTGGTGA

Peptide Sequence

PEP ID

Os11t0112800-01
PEP Infomation

pep chromosome:IRGSP-1.0:11:592270:594666:1 gene:Os11g0112800 transcript:Os11t0112800-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Saposin-like domain containing protein. (Os11t0112800-01)
Sequence

MDFKVASFLLLLLIVTCGAAQGQGNDFVVLDLKTTEIGEDASPMYKEQIASTKIPVTLLR
SKHSSLCSACENITSEAVNFLSEKQIQDKIRTILHDTCSQTFSFEQKCLETMDSYATLVF
AKIAEIKPAAFCKHARGWFCSTYRWFW

Transcript Sequence

Transcript ID

Os11t0112800-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:11:592270:594666:1 gene:Os11g0112800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Saposin-like domain containing protein. (Os11t0112800-01)
Sequence

GTCTTTCCCCTTTCGATTCCCCCTCCTCTCTTCCTTCCCCTATCGTCAACTAGCTCGAGT
TGCTTGCTTGTTCCCTCTGCTGCTTCCTCTCTTGTGTGGATTGGATTCCCGGCCTGGCCC
TTTCTTTTTCCTCTTCTCTCCTAGATTAGAATCGTCGCGATTTGATTCCTCAATCTCTCG
ATTTGGCCGCCCTATCTGTTATTAATCCCCAATTGTTCTTCACACACATACTCAATTGCA
GGTCAATTGCAGCCAGAAAGAGGCGATGGATTTCAAAGTTGCTTCCTTTCTCCTACTCCT
GTTAATCGTCACCTGCGGAGCTGCTCAAGGTCAAGGCAACGATTTTGTTGTCCTTGATCT
AAAAACAACTGAGATCGGGGAAGATGCTAGCCCAATGTACAAGGAGCAAATTGCGTCGAC
CAAGATACCTGTAACTCTTCTGAGGAGCAAGCACAGCTCACTGTGCTCGGCTTGTGAAAA
CATCACAAGTGAAGCTGTCAATTTTCTTAGTGAAAAACAAATACAAGATAAGATAAGGAC
GATCCTTCATGACACTTGTTCTCAGACATTCTCCTTTGAGCAAAAGTGTCTTGAGACTAT
GGACTCCTATGCAACTCTTGTCTTTGCAAAAATTGCTGAGATCAAGCCAGCTGCGTTCTG
CAAACATGCAAGAGGATGGTTCTGCAGTACGTACCGCTGGTTCTGGTGAACGGTGAGAAG
TTCCTGGAGAAGAACGATGTGTGCGCAATGATCCAAGCCTGTGATGCAGGCAAGAGGAAG
GCACTCAACTTGTTCTCTGCACGGAAATTGGTGCGTGACGCATGAAGTAGTAGGAAGCGT
GCGTACACGAATCAAGTTGTGGTAGGCATGGAGAAGACGAAGTGATGGCAGCTTGTACAT
ATGGTTATTATTAATGAAATATTAGGCAATACACTATGTGAAGGGGATGATACGATAATT
ATGTGCACATACTTGTGCTGCTATCTGAATTCTGAAAGTAATGCTATGATTACTTTTTTG
TG