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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os11t0112300-01
CDS Infomation

cds chromosome:IRGSP-1.0:11:573569:574724:-1 gene:Os11g0112300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to GCN5L1 family protein. (Os11t0112300-01)
Sequence

ATGGAGGCGGCGGGCGGGCAGCTGGAAGCGGCGCTGCTCCACATCATGCAACGCCACCAC
CACCAATCCCTCCATCAGCGCAACAAAACCGAGAGAGTAAAGGTGGATGCTGTGAAGAGC
GCGGCGCGGGTTGCAGATCTTCTCGTGGCCACGGTTGACGGTGGAGTGCAGGAGCTCTAC
ATCAACGAGAGGCGCATAGAGTTTGAAGCCCGCGCGCTGCTTGCTACAATCGCGCGGTTC
AAGAAGCAGACTGACCAGTGGCTTGCTGCCACCAACGCAATCAACTCTGTCTTGAAGGAA
ATTGGAGATTTTGAGAACTGGATGAAGATCATGGATTTCGACTGTAAAAGTATAAATGCA
GCTATCCGTAACATTCACCAATCCTGA

Peptide Sequence

PEP ID

Os11t0112300-01
PEP Infomation

pep chromosome:IRGSP-1.0:11:573569:574724:-1 gene:Os11g0112300 transcript:Os11t0112300-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to GCN5L1 family protein. (Os11t0112300-01)
Sequence

MEAAGGQLEAALLHIMQRHHHQSLHQRNKTERVKVDAVKSAARVADLLVATVDGGVQELY
INERRIEFEARALLATIARFKKQTDQWLAATNAINSVLKEIGDFENWMKIMDFDCKSINA
AIRNIHQS

Transcript Sequence

Transcript ID

Os11t0112300-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:11:573569:574724:-1 gene:Os11g0112300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to GCN5L1 family protein. (Os11t0112300-01)
Sequence

GGGCCCAAATGTCAGTGATAGAGGATCCTGATCCCCAATCTCCTCCCCTGCAGGCCGCCG
CGCCGGAGAGCGGAGACCGTCAACATCCTTCTCCCTCCTCGAGGTCTCGCGGCGGCGTTA
GCTTCAGCCTCGGATTCAAGAGGACATGGAGGCGGCGGGCGGGCAGCTGGAAGCGGCGCT
GCTCCACATCATGCAACGCCACCACCACCAATCCCTCCATCAGCGCAACAAAACCGAGAG
AGTAAAGGTGGATGCTGTGAAGAGCGCGGCGCGGGTTGCAGATCTTCTCGTGGCCACGGT
TGACGGTGGAGTGCAGGAGCTCTACATCAACGAGAGGCGCATAGAGTTTGAAGCCCGCGC
GCTGCTTGCTACAATCGCGCGGTTCAAGAAGCAGACTGACCAGTGGCTTGCTGCCACCAA
CGCAATCAACTCTGTCTTGAAGGAAATTGGAGATTTTGAGAACTGGATGAAGATCATGGA
TTTCGACTGTAAAAGTATAAATGCAGCTATCCGTAACATTCACCAATCCTGACTCTGCTT
TCGACTATGGTGTTAGGAATATTTTATCCTGTTCCTACTCAGCTAGCACCTTTTTTTTCA
TTTGAGTTGTCAACTCTGTTGTATAGGACTGGTTTGCTCTACACAATGGATAAACAAAAC
CTTCCCAATCGTTTTAGTGGGAAACCTCCTGTGGGAAACAATATATTTTGTTGAAAATAT
TTGTCTACCTCAGAAAATAAATATTGGTTCTAAGG