Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os11t0112000-01
CDS Infomation

cds chromosome:IRGSP-1.0:11:563239:563851:-1 gene:Os11g0112000 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Hypoxia-Induced Gene Domain 3, Hypoxia-Induced Gene Domain Protein 3 description:Similar to Hypoxia induced protein conserved region containing protein, expressed. (Os11t0112000-01)
Sequence

ACATTCGTGTATTCAGGAGGGCTGTGGGCGACGGCGGTGGGCGCATCGGTGGCGTACGGG
CGGAGGAAGACGCCGCAGATGCGGCTGATCCACGCCAGGCTTCACGCGCAGGCCCTCACC
CTCGCCGTCCTCGGTGGAGCCGCCCTTGCGCACCACTACTACAACCCATCATCCAACACC
AACAACAGCAGCAGCTTGGACTACGACTTCTACTCGCAGCTGCCGCCGGCCACCACCGAC
GACGGCCAGGAGAACGAGAGGTGGAGCTGGTAG

Peptide Sequence

PEP ID

Os11t0112000-01
PEP Infomation

pep chromosome:IRGSP-1.0:11:563239:563851:-1 gene:Os11g0112000 transcript:Os11t0112000-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Hypoxia-Induced Gene Domain 3, Hypoxia-Induced Gene Domain Protein 3 description:Similar to Hypoxia induced protein conserved region containing protein, expressed. (Os11t0112000-01)
Sequence

TFVYSGGLWATAVGASVAYGRRKTPQMRLIHARLHAQALTLAVLGGAALAHHYYNPSSNT
NNSSSLDYDFYSQLPPATTDDGQENERWSW

Transcript Sequence

Transcript ID

Os11t0112000-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:11:563239:563851:-1 gene:Os11g0112000 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Hypoxia-Induced Gene Domain 3, Hypoxia-Induced Gene Domain Protein 3 description:Similar to Hypoxia induced protein conserved region containing protein, expressed. (Os11t0112000-01)
Sequence

CCATCGAATCGATCCCCTTTCTGATTCAATCCAATTCCTTCATCTCTACAGTACTCCTTA
ATCAGTCAATCCTTTCTGAACATTCGTGTATTCAGGAGGGCTGTGGGCGACGGCGGTGGG
CGCATCGGTGGCGTACGGGCGGAGGAAGACGCCGCAGATGCGGCTGATCCACGCCAGGCT
TCACGCGCAGGCCCTCACCCTCGCCGTCCTCGGTGGAGCCGCCCTTGCGCACCACTACTA
CAACCCATCATCCAACACCAACAACAGCAGCAGCTTGGACTACGACTTCTACTCGCAGCT
GCCGCCGGCCACCACCGACGACGGCCAGGAGAACGAGAGGTGGAGCTGGTAGTGCTACCC
TTCCTTCCTGCTGCAAGATGCAGACAAATGAAGATGATGACGATCACGATGATCAATTAG
TAATAATCTAATCGGCTCCATTAGTTTTATCTTATCTTAATAATAGAGTATGTCCTCCTC
CTAATCCATCCACCTAGGATGGTCTTATCCACTCCAACCCATCCTCTGCTCTGTACTATG
TAATTATCCATTCCATTCCATCCGGACCCTGCTTTTCCGATGCCTTGATTACAATTGATG
TCAGTGGTATGCT