Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os11t0111800-00
CDS Infomation	cds chromosome:IRGSP-1.0:11:552576:558648:1 gene:Os11g0111800 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:basic helix-loop-helix protein 160, SKIP interacting protein 19, SKIPa-interacting protein 19, SKIPa-interacting protein 19 description:Conserved hypothetical protein. (Os11t0111800-00)
Sequence	ATGTCAGGGAAGGATCAGAAGAAAGCAACAACAGCTTTAGAAGAGAAGCTCGAGCTCCTA CGTGATGTTACAAAGTCAAGTGCGGCAAACGAGACATCAATCCTTGTAGATGCGTCCAAG TACATCAAAGAGCTCAAGGACAAGGTATCTCAGGAGCCTGAACAGCTGGGCAGCACTAGC AGTTCCATGCCAATGCCAAGAGTCAGTGTTTCATCGGTAGAGCTAGAGAAGAAGATAGGT TTTCGAATCAATGTGTCAATGGAGAAGAGTCAGCCTGAGTTGCTGACGTCGGTGTTAGAA GCATTCGAGGAGCTTGGCCTCGACGTCCTTGATGCTGACGTGTCGTGCGCAGACGACACC GCTTTTCGTCTTGAAGCGCTTGGATCCAGCCAAAGTGAAGCTGCAGAGACAAGCGTGGAT GAGCAAATGGTTCGTCATGCAGTGCTGCAAGCCATCAAGAAATGCATTGACGGATCATCA ATTTGA

Peptide Sequence

PEP ID	Os11t0111800-00
PEP Infomation	pep chromosome:IRGSP-1.0:11:552576:558648:1 gene:Os11g0111800 transcript:Os11t0111800-00 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:basic helix-loop-helix protein 160, SKIP interacting protein 19, SKIPa-interacting protein 19, SKIPa-interacting protein 19 description:Conserved hypothetical protein. (Os11t0111800-00)
Sequence	MSGKDQKKATTALEEKLELLRDVTKSSAANETSILVDASKYIKELKDKVSQEPEQLGSTS SSMPMPRVSVSSVELEKKIGFRINVSMEKSQPELLTSVLEAFEELGLDVLDADVSCADDT AFRLEALGSSQSEAAETSVDEQMVRHAVLQAIKKCIDGSSI

Transcript Sequence

Transcript ID	Os11t0111800-00
Transcript Infomation	cdna chromosome:IRGSP-1.0:11:552576:558648:1 gene:Os11g0111800 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:basic helix-loop-helix protein 160, SKIP interacting protein 19, SKIPa-interacting protein 19, SKIPa-interacting protein 19 description:Conserved hypothetical protein. (Os11t0111800-00)
Sequence	ATGTCAGGGAAGGATCAGAAGAAAGCAACAACAGCTTTAGAAGAGAAGCTCGAGCTCCTA CGTGATGTTACAAAGTCAAGTGCGGCAAACGAGACATCAATCCTTGTAGATGCGTCCAAG TACATCAAAGAGCTCAAGGACAAGGTATCTCAGGAGCCTGAACAGCTGGGCAGCACTAGC AGTTCCATGCCAATGCCAAGAGTCAGTGTTTCATCGGTAGAGCTAGAGAAGAAGATAGGT TTTCGAATCAATGTGTCAATGGAGAAGAGTCAGCCTGAGTTGCTGACGTCGGTGTTAGAA GCATTCGAGGAGCTTGGCCTCGACGTCCTTGATGCTGACGTGTCGTGCGCAGACGACACC GCTTTTCGTCTTGAAGCGCTTGGATCCAGCCAAAGTGAAGCTGCAGAGACAAGCGTGGAT GAGCAAATGGTTCGTCATGCAGTGCTGCAAGCCATCAAGAAATGCATTGACGGATCATCA ATTTGA