Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os11t0110066-01
CDS Infomation

cds chromosome:IRGSP-1.0:11:481162:484697:-1 gene:Os11g0110066 gene_biotype:protein_coding transcript_biotype:protein_coding description:Hypothetical conserved gene. (Os11t0110066-01)
Sequence

ATGGCGTCCGCGACGGAGGCGGAGGCTGAGGAGAGGGACAAACCCATCGTCGTCCGTGTC
AAGCGCAAGCCCTCCCAGACCCGCCCCGACGCTTTCTGGCTAGAGATCAATGAGAGGCCG
GTGAAGAAGGCTATGCTCGATTTCTCCAGCCTTTCAGTCTCCGAGCCATCCTCTGCTCCT
AATAAAGCTTCAGAGGAACCACGAATTAAGAAACTTCTGGTACAGCACATTGAGACAGTA
CACCATTCTGAGGCAGTTCAAGATGTTTTGCACTCTCTTCTGCATTCTGACTTGGATGCC
AAAGAGATAAAGAGCAAGACAAAGGAATGGAACAACAGAACTAATCAAGATAAAAAACAA
GACCAGCTACGATCAGCAGCCAGACAGAGGCATGAGGACCTTGGAAGAAATGCTCGCTTT
GCACAAATTTGGAGGAGTCGGAAAGGAGACAGGAATGAAGTTGATGAATCACTACGAGAA
ATATGCCATCTTTATGATGCTGTCCAAGTAGATTCTGATGAAGAGAAGCATCCAGCAGAA
CCAAGGATTACCTCTTTTGAAGAGGGTGCAATTTTATGCAATTTTCTTCCACTTATACGG
GAACATTTGCCATCAGCTGCTGAAGAAATTGAATCAGATATTATTTCGCTGGCACAATCG
GAAGATTCAGATGTTTATGACATATATACTGTCAAAGAGGTGGATGATGATACAACAATG
GAGGGCACATCTTCAGCTCCATACCCACTGTTACAAGTGGACAATGGCGATGATGTGTGT
TATGATGATGACGATCCTTATGATACAGATGATTCAAATGCGGAGGATAATCCATTATAT
GATTATCCTGCGGAGTTGTCAGAAGATGAGGATGATGATTCCAATAGCGAGAATCCATTT
TCAGACCTAGACGGTTCTGATCCCGAGTATGAGAAGGAAGAGGTGGAGGAAGAAAGGGAT
GAAGACGGGAGATAG

Peptide Sequence

PEP ID

Os11t0110066-01
PEP Infomation

pep chromosome:IRGSP-1.0:11:481162:484697:-1 gene:Os11g0110066 transcript:Os11t0110066-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Hypothetical conserved gene. (Os11t0110066-01)
Sequence

MASATEAEAEERDKPIVVRVKRKPSQTRPDAFWLEINERPVKKAMLDFSSLSVSEPSSAP
NKASEEPRIKKLLVQHIETVHHSEAVQDVLHSLLHSDLDAKEIKSKTKEWNNRTNQDKKQ
DQLRSAARQRHEDLGRNARFAQIWRSRKGDRNEVDESLREICHLYDAVQVDSDEEKHPAE
PRITSFEEGAILCNFLPLIREHLPSAAEEIESDIISLAQSEDSDVYDIYTVKEVDDDTTM
EGTSSAPYPLLQVDNGDDVCYDDDDPYDTDDSNAEDNPLYDYPAELSEDEDDDSNSENPF
SDLDGSDPEYEKEEVEEERDEDGR

Transcript Sequence

Transcript ID

Os11t0110066-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:11:481162:484697:-1 gene:Os11g0110066 gene_biotype:protein_coding transcript_biotype:protein_coding description:Hypothetical conserved gene. (Os11t0110066-01)
Sequence

GACGGCGAGAGAACCAACCAACCCTACCTTGGCTTTGCCGGCGGGCGGCGGCGATGGCGT
CCGCGACGGAGGCGGAGGCTGAGGAGAGGGACAAACCCATCGTCGTCCGTGTCAAGCGCA
AGCCCTCCCAGACCCGCCCCGACGCTTTCTGGCTAGAGATCAATGAGAGGCCGGTGAAGA
AGGCTATGCTCGATTTCTCCAGCCTTTCAGTCTCCGAGCCATCCTCTGCTCCTAATAAAG
CTTCAGAGGAACCACGAATTAAGAAACTTCTGGTACAGCACATTGAGACAGTACACCATT
CTGAGGCAGTTCAAGATGTTTTGCACTCTCTTCTGCATTCTGACTTGGATGCCAAAGAGA
TAAAGAGCAAGACAAAGGAATGGAACAACAGAACTAATCAAGATAAAAAACAAGACCAGC
TACGATCAGCAGCCAGACAGAGGCATGAGGACCTTGGAAGAAATGCTCGCTTTGCACAAA
TTTGGAGGAGTCGGAAAGGAGACAGGAATGAAGTTGATGAATCACTACGAGAAATATGCC
ATCTTTATGATGCTGTCCAAGTAGATTCTGATGAAGAGAAGCATCCAGCAGAACCAAGGA
TTACCTCTTTTGAAGAGGGTGCAATTTTATGCAATTTTCTTCCACTTATACGGGAACATT
TGCCATCAGCTGCTGAAGAAATTGAATCAGATATTATTTCGCTGGCACAATCGGAAGATT
CAGATGTTTATGACATATATACTGTCAAAGAGGTGGATGATGATACAACAATGGAGGGCA
CATCTTCAGCTCCATACCCACTGTTACAAGTGGACAATGGCGATGATGTGTGTTATGATG
ATGACGATCCTTATGATACAGATGATTCAAATGCGGAGGATAATCCATTATATGATTATC
CTGCGGAGTTGTCAGAAGATGAGGATGATGATTCCAATAGCGAGAATCCATTTTCAGACC
TAGACGGTTCTGATCCCGAGTATGAGAAGGAAGAGGTGGAGGAAGAAAGGGATGAAGACG
GGAGATAGAATCTATGCTTGGGGTACAAATATGGGTAGTAACTAGAGATAAGATGATGTA
TGGGCTAGCGGTTGAGCTGGCTGTGATGTTTACCTGTTAGGTTGGCTATATGTGAGAGAA
CTTTTGGTGTTAGTATACTGATGAATTGTATTCCCAGCCTCAGCAACTCTCAACTCTCAG
CGTGTTAGACCTGTAACTCGATATGATCACTGAAGGAGAAGTGTAGGAGTAAGAAGAATG
AATTATTAAATATGGGAGAATTTCCTGGCG