Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os11t0109400-01
CDS Infomation	cds chromosome:IRGSP-1.0:11:435166:437936:1 gene:Os11g0109400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Cation/H+ exchanger domain containing protein. (Os11t0109400-01)
Sequence	ATGGCGGGTGCAAACGCGTCGACGGTGAAGCCGGTGGTGGCGGCGTGCTACGACAACAAC CTGGTGAACTCGCAGGGGATGTTCCTGGGCGACGAGCCGCTGCGCTTCGCCCTCCCGCTC CTCCTGGTGCAGGTCTCCATCATCCTCATCCTCTCCGCCGCCGCCCACCACGTCCTCCGC CGCCTCGGCCAGTGCCGCTTCGTGACCCACATGCTCGTCGGCATCTTCCTCGGCCCCTCC GTCCTCGGCCGCAACCCCCACCTCCGCACCGCCCTCTTCTCCGAGCGCGGCACCTACATC CTCGAGAGCGTCTCCCTCGTCGCCCTCATCCTCTTCCTCTTCTCCATGGCCGTCAAGACC GACCTCACCCTCCTCCGCCGCCCCACCGCCCGAGCCCTCGCCGTCGGCCTCGCCGGCTCC CTCGTCCCCCTCGCCGTCACCCTCCCCGTCTTCCACGCCCTCAGCCCCTCCCTCCCCGCC GACCTCCGCGGCTCCTCCCTCATCACCGAGCTCGCCGTCCGCCTCTCCCTCTCCTCCTTC CCCGTCGTCGCCGACGCCCTCGCCGAGCTCGACCTCCTCAACTCCGAGCTCGGCCGCGTC GCCCTCAACGCCTCCCTCATCACCGACGTCACCTCCTGGTTCCTCCGCGCCTGCTTCGCC GCCGCCTTCCTCATCACCCAGGCTAAGTCCCCGCTCTTCACCGCCAAGGTCCTCGCCTCC TTCGCCGCCTTCGTCCTCTTCGTCTTCTTCGTCGCCCGCCCCGCCGGCCGCTACATCGCC CGCAAGCGCACCCCGCCCGGGGACCTCCTCTCCGAGGGCTCCTTCGTCCTCGTCGTCATC GCCGCGCTGCTCTCCGCGCTCGTCACCGACGTCATCGGCTTCAAGTTTATGATCGGCCCC ATGATGCTGGGCCTCGCGCTCCCCGGCGGCATGCCCATCGGCGCCACCCTCACGGAGCGC CTCGACTCCTTCTTCATCGCGCTCTTCCTCCCGGTCTACATGGCGCTCGCCGGCTACCGC ACCGACCTGGCGGAGCTGAGCCTGATAGGCGTCAGCGCGGAGCACGAGGAGAAGTTCTGC GCGCTGGAGCTGTTCGTGGCGCTGTGCGTGGCCGGCAAGATGGTGGGGTGCGTCGCGGCG GGGCTCTTCTTCTCCATGCCGTTCCGGGAGGCCACCGTGCTGGCGCTGATGCTCAACATC CGGGGCATCGTGGAGGTGGCCGCCATCAACAACTGGGGGGACACGATGAAGGCGACGGCG GAGCACTACTCGACGCTGACGCTGTCGATGGTGGTCATCACGGCGGTGGCGACGCCGCTG ATCAAGCTGCTGTACGACCCGTCGGGGAGGTTCGCGCGGGCGAAGCGGCGGACCATGGAG GAGTCGCGGCCCAACGCGGAGCTGCGGGTGATGGCCTGCCTCTTCAGCGAGGACCACGCG GCGCCGCTGCTGGACCTGATCGAGGCGTCGGGGTCGTCGCGCGACGCCCCCGTGTCGCTG ATCGTGCTCCACCTGACGGAGCTGGTGGGGCACGCGGCGTCCGTGCTGAAGCCGCACAGG AAGTCCCGGAGCAGCTGCGGCAACCCGACGCCGTCGGACCGCATCGTGAACGCGTTCCGC TACTTCGAGCAGCAGGCGCCGCTGGGGGCGGTGACGGTGAGCCCGTACGTGGTGGCGTCG CCGTACAGCAGCATGCAGCACGACGTGTGCCTCCTGGCGCACAGCCGCAAGGCCAACCTC ATCCTGCTCCCCTTCCACAAGTCCTCGGACGGCGCCCGGAGCACCGCCAACAACGCCATC CGCGGCATCAACCGGTCGGTGATGCAGTACGCGCCGTGCTCGGTGGGCATCCTGATCGAC CACGGGGTGGCGGCGGGGTCGGCGTGCGCCACGGCGTCCAACAGCACGCTGCAGCGGGTG GCGCTCTACTTCCTGGGCGGCGCCGACGACCGGGAGGCGCTGGCGTACGTGGCGCGGATG GCGGAGTGCGGTTTGGTGGCGGTGACGGTGGTGCGGCTGAAGCTGCGGGACTGGGTGGGG ATGGGGGGCCGCGACGAGATGAGGGACGAGGAGGCGCTGCAGGAGTTCTGGCAGAGGTAC AGCTGCGCGGGCGCGGAGAGGGTGGCGTACGTGGAGAAGACGGTGGAGGACGGGGAGGGG ACGGCGTCGGTGGTGCGCGCCATGAGCGACAAGTTCGACCTGCTGGTGGTTGGTAGGAGA GAGGGCGGCGGCGACGGCGCGGAGGGGTCGTCGGCGGCGGCGCTGACGAGCGGGCTGTCG GAGTGGAGCGAGTTCCCGGAGCTGGGAGTGCTGGGCGACATGCTTGCCTCCGCCGACTTC GCGGCCAAGGTCTCTATCCTCGTCGTCCAGCAGCAGGCCGCCACCAGGAACGACGCCGAT TACTGA

Peptide Sequence

PEP ID	Os11t0109400-01
PEP Infomation	pep chromosome:IRGSP-1.0:11:435166:437936:1 gene:Os11g0109400 transcript:Os11t0109400-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Cation/H+ exchanger domain containing protein. (Os11t0109400-01)
Sequence	MAGANASTVKPVVAACYDNNLVNSQGMFLGDEPLRFALPLLLVQVSIILILSAAAHHVLR RLGQCRFVTHMLVGIFLGPSVLGRNPHLRTALFSERGTYILESVSLVALILFLFSMAVKT DLTLLRRPTARALAVGLAGSLVPLAVTLPVFHALSPSLPADLRGSSLITELAVRLSLSSF PVVADALAELDLLNSELGRVALNASLITDVTSWFLRACFAAAFLITQAKSPLFTAKVLAS FAAFVLFVFFVARPAGRYIARKRTPPGDLLSEGSFVLVVIAALLSALVTDVIGFKFMIGP MMLGLALPGGMPIGATLTERLDSFFIALFLPVYMALAGYRTDLAELSLIGVSAEHEEKFC ALELFVALCVAGKMVGCVAAGLFFSMPFREATVLALMLNIRGIVEVAAINNWGDTMKATA EHYSTLTLSMVVITAVATPLIKLLYDPSGRFARAKRRTMEESRPNAELRVMACLFSEDHA APLLDLIEASGSSRDAPVSLIVLHLTELVGHAASVLKPHRKSRSSCGNPTPSDRIVNAFR YFEQQAPLGAVTVSPYVVASPYSSMQHDVCLLAHSRKANLILLPFHKSSDGARSTANNAI RGINRSVMQYAPCSVGILIDHGVAAGSACATASNSTLQRVALYFLGGADDREALAYVARM AECGLVAVTVVRLKLRDWVGMGGRDEMRDEEALQEFWQRYSCAGAERVAYVEKTVEDGEG TASVVRAMSDKFDLLVVGRREGGGDGAEGSSAAALTSGLSEWSEFPELGVLGDMLASADF AAKVSILVVQQQAATRNDADY

Transcript Sequence

Transcript ID	Os11t0109400-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:11:435166:437936:1 gene:Os11g0109400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Cation/H+ exchanger domain containing protein. (Os11t0109400-01)
Sequence	ATCATGGCTTCCCTCCCTCATGCACGCTGACGCTGCAATGCTCCTCCTCTGCGGCGGCTA GATCATTCATTCCAACAATTAAATTAACAATAATTGAATTGAAGGACATTAATTAGTTTG ATCGATGGCGGGTGCAAACGCGTCGACGGTGAAGCCGGTGGTGGCGGCGTGCTACGACAA CAACCTGGTGAACTCGCAGGGGATGTTCCTGGGCGACGAGCCGCTGCGCTTCGCCCTCCC GCTCCTCCTGGTGCAGGTCTCCATCATCCTCATCCTCTCCGCCGCCGCCCACCACGTCCT CCGCCGCCTCGGCCAGTGCCGCTTCGTGACCCACATGCTCGTCGGCATCTTCCTCGGCCC CTCCGTCCTCGGCCGCAACCCCCACCTCCGCACCGCCCTCTTCTCCGAGCGCGGCACCTA CATCCTCGAGAGCGTCTCCCTCGTCGCCCTCATCCTCTTCCTCTTCTCCATGGCCGTCAA GACCGACCTCACCCTCCTCCGCCGCCCCACCGCCCGAGCCCTCGCCGTCGGCCTCGCCGG CTCCCTCGTCCCCCTCGCCGTCACCCTCCCCGTCTTCCACGCCCTCAGCCCCTCCCTCCC CGCCGACCTCCGCGGCTCCTCCCTCATCACCGAGCTCGCCGTCCGCCTCTCCCTCTCCTC CTTCCCCGTCGTCGCCGACGCCCTCGCCGAGCTCGACCTCCTCAACTCCGAGCTCGGCCG CGTCGCCCTCAACGCCTCCCTCATCACCGACGTCACCTCCTGGTTCCTCCGCGCCTGCTT CGCCGCCGCCTTCCTCATCACCCAGGCTAAGTCCCCGCTCTTCACCGCCAAGGTCCTCGC CTCCTTCGCCGCCTTCGTCCTCTTCGTCTTCTTCGTCGCCCGCCCCGCCGGCCGCTACAT CGCCCGCAAGCGCACCCCGCCCGGGGACCTCCTCTCCGAGGGCTCCTTCGTCCTCGTCGT CATCGCCGCGCTGCTCTCCGCGCTCGTCACCGACGTCATCGGCTTCAAGTTTATGATCGG CCCCATGATGCTGGGCCTCGCGCTCCCCGGCGGCATGCCCATCGGCGCCACCCTCACGGA GCGCCTCGACTCCTTCTTCATCGCGCTCTTCCTCCCGGTCTACATGGCGCTCGCCGGCTA CCGCACCGACCTGGCGGAGCTGAGCCTGATAGGCGTCAGCGCGGAGCACGAGGAGAAGTT CTGCGCGCTGGAGCTGTTCGTGGCGCTGTGCGTGGCCGGCAAGATGGTGGGGTGCGTCGC GGCGGGGCTCTTCTTCTCCATGCCGTTCCGGGAGGCCACCGTGCTGGCGCTGATGCTCAA CATCCGGGGCATCGTGGAGGTGGCCGCCATCAACAACTGGGGGGACACGATGAAGGCGAC GGCGGAGCACTACTCGACGCTGACGCTGTCGATGGTGGTCATCACGGCGGTGGCGACGCC GCTGATCAAGCTGCTGTACGACCCGTCGGGGAGGTTCGCGCGGGCGAAGCGGCGGACCAT GGAGGAGTCGCGGCCCAACGCGGAGCTGCGGGTGATGGCCTGCCTCTTCAGCGAGGACCA CGCGGCGCCGCTGCTGGACCTGATCGAGGCGTCGGGGTCGTCGCGCGACGCCCCCGTGTC GCTGATCGTGCTCCACCTGACGGAGCTGGTGGGGCACGCGGCGTCCGTGCTGAAGCCGCA CAGGAAGTCCCGGAGCAGCTGCGGCAACCCGACGCCGTCGGACCGCATCGTGAACGCGTT CCGCTACTTCGAGCAGCAGGCGCCGCTGGGGGCGGTGACGGTGAGCCCGTACGTGGTGGC GTCGCCGTACAGCAGCATGCAGCACGACGTGTGCCTCCTGGCGCACAGCCGCAAGGCCAA CCTCATCCTGCTCCCCTTCCACAAGTCCTCGGACGGCGCCCGGAGCACCGCCAACAACGC CATCCGCGGCATCAACCGGTCGGTGATGCAGTACGCGCCGTGCTCGGTGGGCATCCTGAT CGACCACGGGGTGGCGGCGGGGTCGGCGTGCGCCACGGCGTCCAACAGCACGCTGCAGCG GGTGGCGCTCTACTTCCTGGGCGGCGCCGACGACCGGGAGGCGCTGGCGTACGTGGCGCG GATGGCGGAGTGCGGTTTGGTGGCGGTGACGGTGGTGCGGCTGAAGCTGCGGGACTGGGT GGGGATGGGGGGCCGCGACGAGATGAGGGACGAGGAGGCGCTGCAGGAGTTCTGGCAGAG GTACAGCTGCGCGGGCGCGGAGAGGGTGGCGTACGTGGAGAAGACGGTGGAGGACGGGGA GGGGACGGCGTCGGTGGTGCGCGCCATGAGCGACAAGTTCGACCTGCTGGTGGTTGGTAG GAGAGAGGGCGGCGGCGACGGCGCGGAGGGGTCGTCGGCGGCGGCGCTGACGAGCGGGCT GTCGGAGTGGAGCGAGTTCCCGGAGCTGGGAGTGCTGGGCGACATGCTTGCCTCCGCCGA CTTCGCGGCCAAGGTCTCTATCCTCGTCGTCCAGCAGCAGGCCGCCACCAGGAACGACGC CGATTACTGACTTAATTGGCTAGTCATGCTGATATACTACCACATTCCCTCTGCTCTTCT CTTCTCTGCTCTGCTGCAATATTAGTGTTCTTCTCCAAGTAATCTTGTGTTTTAGGATTT TTGGCGAGCTTCTGTATTTTACTGTACCTAGGATTGCATAATCTTGCTTTGATTCTGGAC ACAGTCTAGATTTCTATCGCTAGGAATATGTACAAGTATGCATATGATATTGACATATAT CATGTTCGTGT