Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os11t0107000-01
CDS Infomation	cds chromosome:IRGSP-1.0:11:329049:332820:1 gene:Os11g0107000 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:trichome birefringence-like 2 description:Xylan acetyltransferase, Resistance to bacterial leaf blight disease (Os11t0107000-01)
Sequence	ATGTGGAGTGCTCTCTTCTCCCATCTGAGAGAGGTTCACAAGAGAAGCGGAGTTAAGGAG GAGAAGTTGATAATGAAGTCGCCAGCAGCAGCAGGTGAGGCCGCCGGCTGCCACAAGCCG CAGGCGACTGCCACCAACAAGATGACGGTGCTGCAGTCCCCGCTGGGGCTCAGGACCATC CTCACCTCCCTCGTCGCCTTCTTCATCGTCGTCAGCTCCGTCTCCCTCCTCTTCGACCGC AGCCAGGATGCTCAGGCGCAGCTCGCCGTCGCGCAGCATCAGCACCAAGAAGTCCAGCTC AAGCAGAAGCCGGCATCAGCAGCAGTGGGCGAGCAGAAATCAGTATTCGTAGATCAGTCG TCGCTGAGGAGCCAGGAGGCGCAGGTGCAGTGGACATCTGAGCTGCAGGACGTGGCCACG GACAGCGGCGACGGCGGCGTCGACGGCGAGGAGGAGTGCAACTGGTCGTTGGGACGGTGG GTGTACGACAACTCGTCGCGGCCACTTTACTCCGGCTTGAAGTGCTCCTTTATCTTCGAC GAGGTAGCCTGCGACAAGTATGGAAGGAATGACACCAAGTACCAGCACTGGAGATGGCAG CCTCACGGTTGCAACCTTCCAAGATTCAATGCCACAAAGTTTCTTGAAAAGCTTAGGAAC AAGAGACTAGTTTTTGTGGGCGATTCAGTAAACAGAAATCAATGGGTGTCGATGGTGTGC ATGGTGGAGCACTTCATCCCTGATGGCCGCAAGATGCGCGTTTACAACGGCTCCCTTATC TCCTTCAAAGCATTTGAGTACAATGCGACGATAGATTTCTACTGGTCACCACTGCTATTG GAATCAAACAGCGACAACCCCATAATTCACAGAGTGGAGTATCGGATCATAAGGGCAGAC AGGATTGAGAAACACGCCAATGTCTGGAAGGACGCTGATTTCATCGTCTTCAACTCCTAC CTTTGGTGGAGGAAGCAGAGGGATGGTATGACGATGAAAGTCATGTATGGTTCATTTGAG GATGGGGATGCAAAGTTAGATGAGGTGGAAATGGTTGATGGTTATGAGATAGCTCTCAAG AAACTAACTGAATATCTTGGAGCCAATATCAACAAGAACAAGACTAGAATCTTCTTTGCA GGCTCATCACCTGCCCATTCCTGGGCTAGCAACTGGGGAGGAGATGACAACAACAAGTGT CTAAACGAAACAGAACCAATTCAGATAGAAGATTATAGGAGTGCAACCACAGACTACGGC ATGATGGACAAGGCGAAGGAGATCTTTGGAACATTGGAACCAAAGGGCATACATGTTCAG ATACTGAACATCACCCAGCTTTCTGAGTACCGCAAGGACGCCCATCCAACGATATTCAGG AGACAGTACGTTCCTCTGACGAAAGAGCAGATTGCAAACCCGAGCATCTACGCAGACTGC ACGCATTGGTGCCTCCCTGGAGTTCCTGATGTCTGGAACGAGTTCTTGTATGCGTACCTC ATGCACAAATGA

Peptide Sequence

PEP ID	Os11t0107000-01
PEP Infomation	pep chromosome:IRGSP-1.0:11:329049:332820:1 gene:Os11g0107000 transcript:Os11t0107000-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:trichome birefringence-like 2 description:Xylan acetyltransferase, Resistance to bacterial leaf blight disease (Os11t0107000-01)
Sequence	MWSALFSHLREVHKRSGVKEEKLIMKSPAAAGEAAGCHKPQATATNKMTVLQSPLGLRTI LTSLVAFFIVVSSVSLLFDRSQDAQAQLAVAQHQHQEVQLKQKPASAAVGEQKSVFVDQS SLRSQEAQVQWTSELQDVATDSGDGGVDGEEECNWSLGRWVYDNSSRPLYSGLKCSFIFD EVACDKYGRNDTKYQHWRWQPHGCNLPRFNATKFLEKLRNKRLVFVGDSVNRNQWVSMVC MVEHFIPDGRKMRVYNGSLISFKAFEYNATIDFYWSPLLLESNSDNPIIHRVEYRIIRAD RIEKHANVWKDADFIVFNSYLWWRKQRDGMTMKVMYGSFEDGDAKLDEVEMVDGYEIALK KLTEYLGANINKNKTRIFFAGSSPAHSWASNWGGDDNNKCLNETEPIQIEDYRSATTDYG MMDKAKEIFGTLEPKGIHVQILNITQLSEYRKDAHPTIFRRQYVPLTKEQIANPSIYADC THWCLPGVPDVWNEFLYAYLMHK

Transcript Sequence

Transcript ID	Os11t0107000-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:11:329049:332820:1 gene:Os11g0107000 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:trichome birefringence-like 2 description:Xylan acetyltransferase, Resistance to bacterial leaf blight disease (Os11t0107000-01)
Sequence	AGTGTTGCTTGAGAGGTACTCACTCTGTGCAGGTGCCAGTGGACTCAGGGCATTTAGCTA GCCAGCCAAAGCCAATTGCCATGTGGAGTGCTCTCTTCTCCCATCTGAGAGAGGTTCACA AGAGAAGCGGAGTTAAGGAGGAGAAGTTGATAATGAAGTCGCCAGCAGCAGCAGGTGAGG CCGCCGGCTGCCACAAGCCGCAGGCGACTGCCACCAACAAGATGACGGTGCTGCAGTCCC CGCTGGGGCTCAGGACCATCCTCACCTCCCTCGTCGCCTTCTTCATCGTCGTCAGCTCCG TCTCCCTCCTCTTCGACCGCAGCCAGGATGCTCAGGCGCAGCTCGCCGTCGCGCAGCATC AGCACCAAGAAGTCCAGCTCAAGCAGAAGCCGGCATCAGCAGCAGTGGGCGAGCAGAAAT CAGTATTCGTAGATCAGTCGTCGCTGAGGAGCCAGGAGGCGCAGGTGCAGTGGACATCTG AGCTGCAGGACGTGGCCACGGACAGCGGCGACGGCGGCGTCGACGGCGAGGAGGAGTGCA ACTGGTCGTTGGGACGGTGGGTGTACGACAACTCGTCGCGGCCACTTTACTCCGGCTTGA AGTGCTCCTTTATCTTCGACGAGGTAGCCTGCGACAAGTATGGAAGGAATGACACCAAGT ACCAGCACTGGAGATGGCAGCCTCACGGTTGCAACCTTCCAAGATTCAATGCCACAAAGT TTCTTGAAAAGCTTAGGAACAAGAGACTAGTTTTTGTGGGCGATTCAGTAAACAGAAATC AATGGGTGTCGATGGTGTGCATGGTGGAGCACTTCATCCCTGATGGCCGCAAGATGCGCG TTTACAACGGCTCCCTTATCTCCTTCAAAGCATTTGAGTACAATGCGACGATAGATTTCT ACTGGTCACCACTGCTATTGGAATCAAACAGCGACAACCCCATAATTCACAGAGTGGAGT ATCGGATCATAAGGGCAGACAGGATTGAGAAACACGCCAATGTCTGGAAGGACGCTGATT TCATCGTCTTCAACTCCTACCTTTGGTGGAGGAAGCAGAGGGATGGTATGACGATGAAAG TCATGTATGGTTCATTTGAGGATGGGGATGCAAAGTTAGATGAGGTGGAAATGGTTGATG GTTATGAGATAGCTCTCAAGAAACTAACTGAATATCTTGGAGCCAATATCAACAAGAACA AGACTAGAATCTTCTTTGCAGGCTCATCACCTGCCCATTCCTGGGCTAGCAACTGGGGAG GAGATGACAACAACAAGTGTCTAAACGAAACAGAACCAATTCAGATAGAAGATTATAGGA GTGCAACCACAGACTACGGCATGATGGACAAGGCGAAGGAGATCTTTGGAACATTGGAAC CAAAGGGCATACATGTTCAGATACTGAACATCACCCAGCTTTCTGAGTACCGCAAGGACG CCCATCCAACGATATTCAGGAGACAGTACGTTCCTCTGACGAAAGAGCAGATTGCAAACC CGAGCATCTACGCAGACTGCACGCATTGGTGCCTCCCTGGAGTTCCTGATGTCTGGAACG AGTTCTTGTATGCGTACCTCATGCACAAATGATATATGTATAATAATGTAACCTTAATTT GGCCAAATTTCTTCTTTGTTAACTTGTGGGTGTCTAAGTAGGTATAAGTGCACAGTACTT GGCCCCCATCAATTTTTTCTGTTTTTGACATTTACATCATTACATGTAAAGAGAAAGGGA AGAACATAATCGCAGAAATGAAAAGGAAGAAGATAAGTTGATTTGCC