Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os11t0106400-01
CDS Infomation	cds chromosome:IRGSP-1.0:11:295791:301468:-1 gene:Os11g0106400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Ubiquitin-activating enzyme E1 2. (Os11t0106400-01);Similar to Ubiquitin-activating enzyme E1. (Os11t0106400-02);Similar to Ubiquitin-activating enzyme E1. (Os11t0106400-03)
Sequence	ATGCTTACCCGCAAGCGGGAGGAGCTCGCCGGCGAGGTCCACGACTTGCACAAGAAGACC CGCGCCGACGACGAACCCGCCGACGACAACCACACCATGACCACCGGCAGAGCGCCCGAG ATCGATGAGGACCTCCACAGCCGCCAGCTCGCCGTCTATGGCCGCGAGACCATGAAGCGC CTCTTCGCCTCCAACGTCCTCGTCTCTGGCCTCAACGGCCTCGGCGCCGAGATCGCCAAG AACCTTGTCCTTGCGGGTGTCAAGTCCGTAAACTTGCACGATGATGACAATGTGGAGCTA TGGGACTTATCAAGCAACTTCTTCCTCACAGAGAAGGATGTTGGTCAAAACCGTGCTCAA ACTTGTGTTCAGAAGCTACAGGAGCTCAATAATGCTGTTATTATCTCTACTATAACCGGT GATTTGACTAAGGAGCAGCTTTCTAATTTCCAGGCTGTGGTCTTTACTGATATCAGCTTA GAGAAAGCAGTTGAGTTTGACAGTTACTGCCACAACCATCAGCCACCAATTGCTTTCATT AAGTCAGAAATTCGTGGCCTTTTTGGCAGTGTCTTTTGTGACTTTGGTCCTGAGTTTACT GTATTGGATGTTGATGGAGAGGAGCCACATACAGGAATAGTAGCATCGATCAGCAATGAC AACCCTGCGCTTGTTTCCTGTGTTGATGATGAGCGTCTGGAGTTCCAGGATGGTGATTTA GTTGTGTTCTCAGAAGTCCATGGAATGAGTGAACTAAATGATGGGAAACCAAGAAAGATT AAGAACGCTAGGCCTTATTCTTTTACTCTAGAAGAAGACACTACCTCATATGGGACATAT GTTAGAGGTGGTATTGTTACTCAGGTCAAGCCACCAAAGGTTCTTAAATTCAAAACCTTG AAAGACGCCATTAAGGAACCAGGAGAATTTCTCATGAGCGATTTCTCCAAATTCGACCGT CCACCACTTCTGCATTTGGCTTTCCAAGCTTTGGATAAGTTTAGGAATGATTTGAGGCGA TTCCCTATTGCTGGGTCTAGTGATGATGTGCAAAGACTGATAGATTTTGCTATTAGCATT AACGAGTCCCTGGGTGATAGCAAACTTGAAGAGCTCGACAAAAAGCTCCTGCATCATTTT GCAAGTGGTTCCAGGGCTGTTCTGAACCCTATGGCTGCAATGTTTGGTGGCATTGTAGGT CAAGAGGTTGTGAAAGCATGCTCAGGGAAATTCCATCCACTTTACCAGTTCTTCTATTTT GATTCTGTTGAATCTCTCCCTGTTGAACCATTGGAGCCAGCCGAGTTGAAGCCAGAGAAT ACTAGATATGATGCACAAATCAGTGTTTTTGGATCTAACCTTCAAAAGAAACTTGAGCAG GCGAAAATATTTATGGTTGGTTCTGGGGCGCTTGGATGTGAGTTCTTGAAAAACCTAGCG CTAATGGGCATTTCTTGCAATCAGAATGGAAAGCTGATAGTGACAGATGATGATGTTATT GAAAAAAGCAATCTCAGTCGCCAGTTTCTCTTCCGTGACTGGAACATTGGTCAGCCCAAG TCCACGGTTGCTGCTACTGCTGCTATGGCAATTAATCCTAAGCTTCATGTCGAGGCCCTT CAGAACAGAGCAAGTCCTGAGACTGAAAATGTGTTCAACGATGCCTTTTGGGAGAGCCTG GATGCTGTTGTCAATGCGTTGGACAATGTTACCGCAAGAATGTATATTGACTCCCGATGT GTATATTTCCAGAAGCCACTCTTGGAATCTGGGACTCTGGGTGCTAAATGTAACACACAG ATGGTCATACCTCACCTAACAGAGAACTATGGCGCATCCAGAGATCCACCTGAAAAGCAG GCGCCGATGTGTACTGTACATTCATTTCCTCATAATATTGATCATTGCCTAACCTGGGCT AGGTCTGAGTTTGAGGGTTTGCTTGAGAAGACCCCCACTGAAGTAAATGCCTTCCTATCG AATCCTGGTGGATATGCAACTGTAGCAAGAACTGCTGGTGATGCACAGGCTAGGGATCAG CTTGAGCGCGTTATTGAATGTCTCGAGAGAGAGAAGTGTGAGACATTCCAAGATTGTATT ACCTGGGCCCGGCTCAAGTTTGAGGATTATTTCTCCAACCGTGTGAAGCAACTGACATAC ACTTTCCCTGAAGATGCGATGACCAGCTCTGGTGCTCCTTTCTGGTCTGCTCCAAAGCGT TTCCCACGACCACTGGAGTTCTTGACATCTGATCCAAGCCAGCTTAACTTTATTTTGGCT GCTGCAATTTTAAGGGCAGAGACATTTGGGATACCCATACCTGACTGGGTCAAAAACCCA GCAAAGATGGCTGAAGCTGTTGACAAGGTGATTGTTCCTGATTTCCAACCAAAACAGGGG GTTAAGATAGTTACAGATGAGAAGGCTACTAGTCTTTCGTCTGCATCTGTTGATGATGCT GCTGTCATTGAAGAGCTTATTGCAAAGTTAGAAGCAATTTCCAAAACACTGCAACCAGGA TTCCAGATGAAACCAATCCAGTTTGAGAAGGATGATGACACCAATTACCATATGGACGTG ATAGCTGGTTTTGCTAACATGCGGGCAAGGAACTATAGCATTCCTGAAGTGGACAAGCTG AAGGCGAAGTTCATAGCTGGCAGGATCATCCCTGCCATTGCCACCTCAACTGCGATGGCT ACTGGTCTTGTCTGCTTGGAACTGTACAAGGTACTCGGTGGTGGGCACAAGGTTGAAGAC TACAGGAACACATTTGCAAACCTTGCAATCCCCCTCTTCTCTATGGCTGAGCCGGTCCCT CCCAAGACCATCAAGCACCAGGACATGGCCTGGACTGTTTGGGACCGCTGGACCATAACT GGCAACATCACGCTGAGGGAGCTTCTGGACTGGCTCAAGGAGAAGGGCCTGAATGCATAC AGCATATCTTGCGGCACCTCGCTGCTGTACAACTCAATGTTCCCGAGGCACAAGGAGCGT CTAGACAAGAAGGTGGTCGATGTGGCGAGGGAGGTGGCAAAGGTGGAGGTGCCCCCATAC CGGCGCCATCTTGACGTGGTGGTGGCTTGTGAGGACGATGATGACAACGACGTTGACATC CCACTGGTATCAATCTACTTCCGGTGA

Peptide Sequence

PEP ID	Os11t0106400-01
PEP Infomation	pep chromosome:IRGSP-1.0:11:295791:301468:-1 gene:Os11g0106400 transcript:Os11t0106400-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Ubiquitin-activating enzyme E1 2. (Os11t0106400-01);Similar to Ubiquitin-activating enzyme E1. (Os11t0106400-02);Similar to Ubiquitin-activating enzyme E1. (Os11t0106400-03)
Sequence	MLTRKREELAGEVHDLHKKTRADDEPADDNHTMTTGRAPEIDEDLHSRQLAVYGRETMKR LFASNVLVSGLNGLGAEIAKNLVLAGVKSVNLHDDDNVELWDLSSNFFLTEKDVGQNRAQ TCVQKLQELNNAVIISTITGDLTKEQLSNFQAVVFTDISLEKAVEFDSYCHNHQPPIAFI KSEIRGLFGSVFCDFGPEFTVLDVDGEEPHTGIVASISNDNPALVSCVDDERLEFQDGDL VVFSEVHGMSELNDGKPRKIKNARPYSFTLEEDTTSYGTYVRGGIVTQVKPPKVLKFKTL KDAIKEPGEFLMSDFSKFDRPPLLHLAFQALDKFRNDLRRFPIAGSSDDVQRLIDFAISI NESLGDSKLEELDKKLLHHFASGSRAVLNPMAAMFGGIVGQEVVKACSGKFHPLYQFFYF DSVESLPVEPLEPAELKPENTRYDAQISVFGSNLQKKLEQAKIFMVGSGALGCEFLKNLA LMGISCNQNGKLIVTDDDVIEKSNLSRQFLFRDWNIGQPKSTVAATAAMAINPKLHVEAL QNRASPETENVFNDAFWESLDAVVNALDNVTARMYIDSRCVYFQKPLLESGTLGAKCNTQ MVIPHLTENYGASRDPPEKQAPMCTVHSFPHNIDHCLTWARSEFEGLLEKTPTEVNAFLS NPGGYATVARTAGDAQARDQLERVIECLEREKCETFQDCITWARLKFEDYFSNRVKQLTY TFPEDAMTSSGAPFWSAPKRFPRPLEFLTSDPSQLNFILAAAILRAETFGIPIPDWVKNP AKMAEAVDKVIVPDFQPKQGVKIVTDEKATSLSSASVDDAAVIEELIAKLEAISKTLQPG FQMKPIQFEKDDDTNYHMDVIAGFANMRARNYSIPEVDKLKAKFIAGRIIPAIATSTAMA TGLVCLELYKVLGGGHKVEDYRNTFANLAIPLFSMAEPVPPKTIKHQDMAWTVWDRWTIT GNITLRELLDWLKEKGLNAYSISCGTSLLYNSMFPRHKERLDKKVVDVAREVAKVEVPPY RRHLDVVVACEDDDDNDVDIPLVSIYFR

Transcript Sequence

Transcript ID	Os11t0106400-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:11:295791:301468:-1 gene:Os11g0106400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Ubiquitin-activating enzyme E1 2. (Os11t0106400-01);Similar to Ubiquitin-activating enzyme E1. (Os11t0106400-02);Similar to Ubiquitin-activating enzyme E1. (Os11t0106400-03)
Sequence	TCGCCCAACTCCCTCATCTCTTGGTGCGGTGTTCCCTCCCGTCTCACGCCGAGCCGCTCG GGTGTGTAGGTCTCGCCGTGGTTGCGACCTGGATCTGACGCGGCAGCTCTCGCCGGCTGC CTTCAGCCTCGTCCTCGCGGCGACCCTCGCTGTCGGCCTCCTCGGCGGCGCCCTACACTA TATGCTTACCCGCAAGCGGGAGGAGCTCGCCGGCGAGGTCCACGACTTGCACAAGAAGAC CCGCGCCGACGACGAACCCGCCGACGACAACCACACCATGACCACCGGCAGAGCGCCCGA GATCGATGAGGACCTCCACAGCCGCCAGCTCGCCGTCTATGGCCGCGAGACCATGAAGCG CCTCTTCGCCTCCAACGTCCTCGTCTCTGGCCTCAACGGCCTCGGCGCCGAGATCGCCAA GAACCTTGTCCTTGCGGGTGTCAAGTCCGTAAACTTGCACGATGATGACAATGTGGAGCT ATGGGACTTATCAAGCAACTTCTTCCTCACAGAGAAGGATGTTGGTCAAAACCGTGCTCA AACTTGTGTTCAGAAGCTACAGGAGCTCAATAATGCTGTTATTATCTCTACTATAACCGG TGATTTGACTAAGGAGCAGCTTTCTAATTTCCAGGCTGTGGTCTTTACTGATATCAGCTT AGAGAAAGCAGTTGAGTTTGACAGTTACTGCCACAACCATCAGCCACCAATTGCTTTCAT TAAGTCAGAAATTCGTGGCCTTTTTGGCAGTGTCTTTTGTGACTTTGGTCCTGAGTTTAC TGTATTGGATGTTGATGGAGAGGAGCCACATACAGGAATAGTAGCATCGATCAGCAATGA CAACCCTGCGCTTGTTTCCTGTGTTGATGATGAGCGTCTGGAGTTCCAGGATGGTGATTT AGTTGTGTTCTCAGAAGTCCATGGAATGAGTGAACTAAATGATGGGAAACCAAGAAAGAT TAAGAACGCTAGGCCTTATTCTTTTACTCTAGAAGAAGACACTACCTCATATGGGACATA TGTTAGAGGTGGTATTGTTACTCAGGTCAAGCCACCAAAGGTTCTTAAATTCAAAACCTT GAAAGACGCCATTAAGGAACCAGGAGAATTTCTCATGAGCGATTTCTCCAAATTCGACCG TCCACCACTTCTGCATTTGGCTTTCCAAGCTTTGGATAAGTTTAGGAATGATTTGAGGCG ATTCCCTATTGCTGGGTCTAGTGATGATGTGCAAAGACTGATAGATTTTGCTATTAGCAT TAACGAGTCCCTGGGTGATAGCAAACTTGAAGAGCTCGACAAAAAGCTCCTGCATCATTT TGCAAGTGGTTCCAGGGCTGTTCTGAACCCTATGGCTGCAATGTTTGGTGGCATTGTAGG TCAAGAGGTTGTGAAAGCATGCTCAGGGAAATTCCATCCACTTTACCAGTTCTTCTATTT TGATTCTGTTGAATCTCTCCCTGTTGAACCATTGGAGCCAGCCGAGTTGAAGCCAGAGAA TACTAGATATGATGCACAAATCAGTGTTTTTGGATCTAACCTTCAAAAGAAACTTGAGCA GGCGAAAATATTTATGGTTGGTTCTGGGGCGCTTGGATGTGAGTTCTTGAAAAACCTAGC GCTAATGGGCATTTCTTGCAATCAGAATGGAAAGCTGATAGTGACAGATGATGATGTTAT TGAAAAAAGCAATCTCAGTCGCCAGTTTCTCTTCCGTGACTGGAACATTGGTCAGCCCAA GTCCACGGTTGCTGCTACTGCTGCTATGGCAATTAATCCTAAGCTTCATGTCGAGGCCCT TCAGAACAGAGCAAGTCCTGAGACTGAAAATGTGTTCAACGATGCCTTTTGGGAGAGCCT GGATGCTGTTGTCAATGCGTTGGACAATGTTACCGCAAGAATGTATATTGACTCCCGATG TGTATATTTCCAGAAGCCACTCTTGGAATCTGGGACTCTGGGTGCTAAATGTAACACACA GATGGTCATACCTCACCTAACAGAGAACTATGGCGCATCCAGAGATCCACCTGAAAAGCA GGCGCCGATGTGTACTGTACATTCATTTCCTCATAATATTGATCATTGCCTAACCTGGGC TAGGTCTGAGTTTGAGGGTTTGCTTGAGAAGACCCCCACTGAAGTAAATGCCTTCCTATC GAATCCTGGTGGATATGCAACTGTAGCAAGAACTGCTGGTGATGCACAGGCTAGGGATCA GCTTGAGCGCGTTATTGAATGTCTCGAGAGAGAGAAGTGTGAGACATTCCAAGATTGTAT TACCTGGGCCCGGCTCAAGTTTGAGGATTATTTCTCCAACCGTGTGAAGCAACTGACATA CACTTTCCCTGAAGATGCGATGACCAGCTCTGGTGCTCCTTTCTGGTCTGCTCCAAAGCG TTTCCCACGACCACTGGAGTTCTTGACATCTGATCCAAGCCAGCTTAACTTTATTTTGGC TGCTGCAATTTTAAGGGCAGAGACATTTGGGATACCCATACCTGACTGGGTCAAAAACCC AGCAAAGATGGCTGAAGCTGTTGACAAGGTGATTGTTCCTGATTTCCAACCAAAACAGGG GGTTAAGATAGTTACAGATGAGAAGGCTACTAGTCTTTCGTCTGCATCTGTTGATGATGC TGCTGTCATTGAAGAGCTTATTGCAAAGTTAGAAGCAATTTCCAAAACACTGCAACCAGG ATTCCAGATGAAACCAATCCAGTTTGAGAAGGATGATGACACCAATTACCATATGGACGT GATAGCTGGTTTTGCTAACATGCGGGCAAGGAACTATAGCATTCCTGAAGTGGACAAGCT GAAGGCGAAGTTCATAGCTGGCAGGATCATCCCTGCCATTGCCACCTCAACTGCGATGGC TACTGGTCTTGTCTGCTTGGAACTGTACAAGGTACTCGGTGGTGGGCACAAGGTTGAAGA CTACAGGAACACATTTGCAAACCTTGCAATCCCCCTCTTCTCTATGGCTGAGCCGGTCCC TCCCAAGACCATCAAGCACCAGGACATGGCCTGGACTGTTTGGGACCGCTGGACCATAAC TGGCAACATCACGCTGAGGGAGCTTCTGGACTGGCTCAAGGAGAAGGGCCTGAATGCATA CAGCATATCTTGCGGCACCTCGCTGCTGTACAACTCAATGTTCCCGAGGCACAAGGAGCG TCTAGACAAGAAGGTGGTCGATGTGGCGAGGGAGGTGGCAAAGGTGGAGGTGCCCCCATA CCGGCGCCATCTTGACGTGGTGGTGGCTTGTGAGGACGATGATGACAACGACGTTGACAT CCCACTGGTATCAATCTACTTCCGGTGAAGTAGGGGCTGTCACTCCGTTGACATGGCGTT GGATTTGGTCTTTTCAGAGAGACGATGTATAAGTTGCACCGGTGCCTGTAAACTAAGTGG GGGTTTAAGCCACATTACTGATTTTATTTTGCTACCATCTTGATAGAGCTCGTTCAGATG GGTGGTTTGTTACCATCCCCGAAACTTGATACGATACCATCATATTGATAATTGATGCAT GATGATACCGTACGACTGAATTAGATATGGCATATGCCCTGTTTG