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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os11t0105800-01
CDS Infomation

cds chromosome:IRGSP-1.0:11:262623:264493:-1 gene:Os11g0105800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Phosphatidate cytidylyltransferase family protein. (Os11t0105800-01)
Sequence

ATGTGGATTCTGGAGAGCCCGCTGCTCCGGGACGCCGGCGCCGCCGTGCTCACCGGAGCC
ACCGCCCTCGCCGTGCTTCGTTTCTGGGAAGAGGTCGGCAACCGCGCCCTCTTGGACCAG
AAACTCTGCAGGAAACTCGTGCATATTACTGTTGGCTTAGTATACTTCCTTATGTGGCCT
TTGTTCAGTGCGGATGATGTCTATGCTCCATTTCTTGCTTCCCTTGTCATTGCATTCAAC
ATCATAAAGGTTACCTTGATTGGACTTGGTATTGTCAAAGATGATGGCGTCATTAACTCC
ATGACCAGGAACGGAGACCGCAGAGAGCTTCTTAAAGGTCCACTGTACTACGCTTGTGCT
ATAACACTCGCTACTGTAATTTTCTGGAGGACATCTCCCATTTCAATCGCAGTGATTTGC
AACTTGTGTGCCGGAGATGGTGTAGCTGACATAGCTGGAAGGCGATTCGGACATGTAAAG
CTTCCTTACAACCCTGATAAGTCTTATGCTGGATCCATTGCAATGTTCTTAGCTGGTTTC
CTTGCATCAATCCTGTACATGTGCTACTTCCACCTCTTTGGATTTGTCGAGGAGAGCTGG
AGCATGGTGATCGCCTTTGGTGTGACATCGCTTGCTGCTGCAATTGTGGAGTCACTCCCT
ATCAGCACACGCCTGGACGACAATCTGACTGTGCCACTCGCCTCTGTCCTCGTTGGTGTC
CTTGTTTTCTATTATACTGGGGCCAGAAACCTGTGTTGTATGAGCGCTGACAGCAGTGAC
ATTTCTGCACTTGTGCAGAATCAGATGGTCTTGGACAGGTTCTAG

Peptide Sequence

PEP ID

Os11t0105800-01
PEP Infomation

pep chromosome:IRGSP-1.0:11:262623:264493:-1 gene:Os11g0105800 transcript:Os11t0105800-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Phosphatidate cytidylyltransferase family protein. (Os11t0105800-01)
Sequence

MWILESPLLRDAGAAVLTGATALAVLRFWEEVGNRALLDQKLCRKLVHITVGLVYFLMWP
LFSADDVYAPFLASLVIAFNIIKVTLIGLGIVKDDGVINSMTRNGDRRELLKGPLYYACA
ITLATVIFWRTSPISIAVICNLCAGDGVADIAGRRFGHVKLPYNPDKSYAGSIAMFLAGF
LASILYMCYFHLFGFVEESWSMVIAFGVTSLAAAIVESLPISTRLDDNLTVPLASVLVGV
LVFYYTGARNLCCMSADSSDISALVQNQMVLDRF

Transcript Sequence

Transcript ID

Os11t0105800-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:11:262623:264493:-1 gene:Os11g0105800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Phosphatidate cytidylyltransferase family protein. (Os11t0105800-01)
Sequence

AATAATCCAAGGTCAGCCACACCCTTAATACATACAGTATGTAAAATCTGAGTTTGTGGC
CGCTCCGCTAGCAAGGCCTCATCCATGTGGATTCTGGAGAGCCCGCTGCTCCGGGACGCC
GGCGCCGCCGTGCTCACCGGAGCCACCGCCCTCGCCGTGCTTCGTTTCTGGGAAGAGGTC
GGCAACCGCGCCCTCTTGGACCAGAAACTCTGCAGGAAACTCGTGCATATTACTGTTGGC
TTAGTATACTTCCTTATGTGGCCTTTGTTCAGTGCGGATGATGTCTATGCTCCATTTCTT
GCTTCCCTTGTCATTGCATTCAACATCATAAAGGTTACCTTGATTGGACTTGGTATTGTC
AAAGATGATGGCGTCATTAACTCCATGACCAGGAACGGAGACCGCAGAGAGCTTCTTAAA
GGTCCACTGTACTACGCTTGTGCTATAACACTCGCTACTGTAATTTTCTGGAGGACATCT
CCCATTTCAATCGCAGTGATTTGCAACTTGTGTGCCGGAGATGGTGTAGCTGACATAGCT
GGAAGGCGATTCGGACATGTAAAGCTTCCTTACAACCCTGATAAGTCTTATGCTGGATCC
ATTGCAATGTTCTTAGCTGGTTTCCTTGCATCAATCCTGTACATGTGCTACTTCCACCTC
TTTGGATTTGTCGAGGAGAGCTGGAGCATGGTGATCGCCTTTGGTGTGACATCGCTTGCT
GCTGCAATTGTGGAGTCACTCCCTATCAGCACACGCCTGGACGACAATCTGACTGTGCCA
CTCGCCTCTGTCCTCGTTGGTGTCCTTGTTTTCTATTATACTGGGGCCAGAAACCTGTGT
TGTATGAGCGCTGACAGCAGTGACATTTCTGCACTTGTGCAGAATCAGATGGTCTTGGAC
AGGTTCTAGTGACTACTGACTAGTAAGTAGCTGCCCTGCAGAGCTGAAAAGAAACTGATT
TACTAATATCAGATTTGATTAATGTAACAAGGATCGATACAAGCTACAAGCATCATAGTT
GTATCTTGTAATCAAGAAAAACAAAAGCTATCTGATATACTAGTAAGGCAAAAGTTGAGT
AGAGGAAAAACATACCAGAGAGCTGTCTACACTCC