Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os11t0104400-01
CDS Infomation	cds chromosome:IRGSP-1.0:11:199761:203743:-1 gene:Os11g0104400 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:OMEGA-3 FATTY ACID DESATURASE 3 description:Similar to W-3 fatty acid desaturase. (Os11t0104400-01)
Sequence	ATGGCGGCGTCGGCGACCCAGGAGGCCGACTGCAAGGCTTCCGAGGACGCCCGTCTCTTC TTCGACGCCGCCAAGCCCCCGCCCTTCCGCATCGGCGACGTCCGCGCCGCCATCCCCGCC CACTGCTGGCGCAAGACCCCCCTCCGCTCCCTCTCCTACGTCGCCCGCGACCTCCTCATC GTCGCCGCCCTCTTCGCCGCAGCCGCTTCCTCCATCGATCTCGCATGGGCGTGGGCATGG CCGCTCTACTGGGCGGCGCAGGGCACCATGTTCTGGGCGCTCTTCGTCCTCGGCCACGAC TGTGGGCACGGGAGCTTCTCCGACAGCGCCATGCTCAACAACGTCGTCGGCCACCTCCTG CACTCCTTCATCCTCGTCCCCTACCATGGATGGAGGATCAGCCACAGAACACACCATCAG AACCACGGTCATATCGAGAGGGACGAGTCCTGGCACCCGATCACCGAGAAATTGTACTGG CAGCTGGAGACACGCACCAAGAAACTGCGCTTTACATTACCATTTACATTGCTTGCCTTC CCTGTCTACCTCTGGTACAGAAGTCCGGGCAAGACCGGATCTCACTTTCTGCCGAGCAGC GATCTGTTCAGCCCCAAGGAAAAGAGTGACGTGATTGTCTCCACCACCTGCTGGTGCATC ATGATTTCGTTGCTCGTCGCCTTGGCGTGCGTGTTTGGCCCTGTTCCGGTGCTCATGCTA TACGGTGTCCCATATCTTGTATTCGTGATGTGGCTTGATTTGGTGACTTATCTGCACCAC CACGGTCACAATGACCTTCCCTGGTATCGTGGAGAGGAATGGAGCTACCTCCGCGGTGGC CTGACAACGGTGGATCGGGACTACGGGTGGATCAACAACATCCACCATGACATTGGCACC CATGTCATCCACCACCTTTTCCCCCAAATTCCTCATTATCACCTCGTAGAAGCAACAAAG GCAGCAAGACCAGTGCTGGGTAGATACTACAGGGAGCCAGAGAAGTCAGGTCCGCTGCCA CTTCACCTGTTTGGCGTTCTGCTGAGGAGCTTGAGAGTTGATCACTTTGTCAGCGACGTC GGGGATGTTGTTTACTACCAAACAGATCACAGCTTGAACGGCACTGACTGGGCCGAAGAT GCTAAGCACAAGTGA

Peptide Sequence

PEP ID	Os11t0104400-01
PEP Infomation	pep chromosome:IRGSP-1.0:11:199761:203743:-1 gene:Os11g0104400 transcript:Os11t0104400-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:OMEGA-3 FATTY ACID DESATURASE 3 description:Similar to W-3 fatty acid desaturase. (Os11t0104400-01)
Sequence	MAASATQEADCKASEDARLFFDAAKPPPFRIGDVRAAIPAHCWRKTPLRSLSYVARDLLI VAALFAAAASSIDLAWAWAWPLYWAAQGTMFWALFVLGHDCGHGSFSDSAMLNNVVGHLL HSFILVPYHGWRISHRTHHQNHGHIERDESWHPITEKLYWQLETRTKKLRFTLPFTLLAF PVYLWYRSPGKTGSHFLPSSDLFSPKEKSDVIVSTTCWCIMISLLVALACVFGPVPVLML YGVPYLVFVMWLDLVTYLHHHGHNDLPWYRGEEWSYLRGGLTTVDRDYGWINNIHHDIGT HVIHHLFPQIPHYHLVEATKAARPVLGRYYREPEKSGPLPLHLFGVLLRSLRVDHFVSDV GDVVYYQTDHSLNGTDWAEDAKHK

Transcript Sequence

Transcript ID	Os11t0104400-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:11:199761:203743:-1 gene:Os11g0104400 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:OMEGA-3 FATTY ACID DESATURASE 3 description:Similar to W-3 fatty acid desaturase. (Os11t0104400-01)
Sequence	GCCTCGCCTCGCTGCCAAAGCTTCACAAATCACAAATCGGAATCAGATCCACCACGACAC GGCGGCGGCAATGGCGGCGTCGGCGACCCAGGAGGCCGACTGCAAGGCTTCCGAGGACGC CCGTCTCTTCTTCGACGCCGCCAAGCCCCCGCCCTTCCGCATCGGCGACGTCCGCGCCGC CATCCCCGCCCACTGCTGGCGCAAGACCCCCCTCCGCTCCCTCTCCTACGTCGCCCGCGA CCTCCTCATCGTCGCCGCCCTCTTCGCCGCAGCCGCTTCCTCCATCGATCTCGCATGGGC GTGGGCATGGCCGCTCTACTGGGCGGCGCAGGGCACCATGTTCTGGGCGCTCTTCGTCCT CGGCCACGACTGTGGGCACGGGAGCTTCTCCGACAGCGCCATGCTCAACAACGTCGTCGG CCACCTCCTGCACTCCTTCATCCTCGTCCCCTACCATGGATGGAGGATCAGCCACAGAAC ACACCATCAGAACCACGGTCATATCGAGAGGGACGAGTCCTGGCACCCGATCACCGAGAA ATTGTACTGGCAGCTGGAGACACGCACCAAGAAACTGCGCTTTACATTACCATTTACATT GCTTGCCTTCCCTGTCTACCTCTGGTACAGAAGTCCGGGCAAGACCGGATCTCACTTTCT GCCGAGCAGCGATCTGTTCAGCCCCAAGGAAAAGAGTGACGTGATTGTCTCCACCACCTG CTGGTGCATCATGATTTCGTTGCTCGTCGCCTTGGCGTGCGTGTTTGGCCCTGTTCCGGT GCTCATGCTATACGGTGTCCCATATCTTGTATTCGTGATGTGGCTTGATTTGGTGACTTA TCTGCACCACCACGGTCACAATGACCTTCCCTGGTATCGTGGAGAGGAATGGAGCTACCT CCGCGGTGGCCTGACAACGGTGGATCGGGACTACGGGTGGATCAACAACATCCACCATGA CATTGGCACCCATGTCATCCACCACCTTTTCCCCCAAATTCCTCATTATCACCTCGTAGA AGCAACAAAGGCAGCAAGACCAGTGCTGGGTAGATACTACAGGGAGCCAGAGAAGTCAGG TCCGCTGCCACTTCACCTGTTTGGCGTTCTGCTGAGGAGCTTGAGAGTTGATCACTTTGT CAGCGACGTCGGGGATGTTGTTTACTACCAAACAGATCACAGCTTGAACGGCACTGACTG GGCCGAAGATGCTAAGCACAAGTGAAAAATTAACTTGAAAATTATTGGAGTCACCGTGTA CTAGTAGCTTAGTAAGCGAAGAATGGATTATTTTCCTGATAGATAGCATATCCATCATAG CATGAACTGCTGAAAGAAAGAGAAATAATAAGCAGCAAGGGCTACTTACCTGCTCAAAAG CATGCGGCCCTGCAGAACACAGGGATTCATTGATCTGTTGGATCACCATATTCAGATCAC TAAACAAGCATTGTCCAATTGTTGTTGTAGCTAGCGGGTCGTTCAGTTTTGACTAGTTCT GAAAGTGTCCAAGTTATACCGTGTAACCCTTTGGAGTTCGCCAGGCAATTCAATGTCTGG AGTTTGTATGCGCCATTGAGCAGACAATTATGATCCGAATTAAGCTCTGCACCTTAATTT TTCCATACTGAATCACTCACAATGGAGTTTATTTGCAT