Plant GARDEN How To ▶︎

JA

EN

Oryza sativa

CDS Sequence

CDS ID

Os11t0103700-01

CDS Infomation

cds chromosome:IRGSP-1.0:11:144247:149101:-1 gene:Os11g0103700 gene_biotype:protein_coding transcript_biotype:protein_coding description:EF-Hand type domain containing protein. (Os11t0103700-01)

Sequence

ATGTCCGGCTCCGACCATCTCTTGGACGCCCTCCTCGCCGCCGCCCGCGCCGCCCTTTCC
CACCTCCACCTTCCCTTTCCCGGATCCAATCCCAAGCCCCACTACTCTGATGACCTCCAT
CTTCTTGGAGTTGGAGTAGCTCATTTCATCCACAGATCCCCCCCCTTCACAACTAGGGCA
TGCTTCCGCCGAACCAAACACCCACCACCACCACCACCAGGTCCACCACCGCACCAGCTC
CTTCTCTGCATTGGCATTGCCTTCCATAACCTGCTGGACAACCATCTTCTCCACCACTTC
CACACCCTACTCATCCATGCAAACAAGCCCCATTTTGATGCCTTCCTCTCCAACCTGCCT
TTTGCCAAGCTTAAGGTTGCCCCACCGCCTCAACCGTCTGCGTCTGTCTCCCCTGCACCT
CCAACTCCAGCTCAAACTGGGGACAAGGAAGACACTGACACTGCTGCTAATCACTCTCCA
CGGTCGACACTGCCTGTTCGCCTGCTCAACATCCCTGTGGACCGCCTACGCTCCACACTT
TCCACGCTTTCACTCACCGACTTGATTGACCTGGTTGCCAGGTCCTTGCCATCCCCTGAT
ACTCATCCAGACAAGAAGAAGCTCTTCTCTGTACACGACTTCTTCAGATATGCGGAGTTT
GAAGGAAAGCGATTCTTTGAGGAGTTGGATAGAGATGGTGATGGCCAAGTCACCCTGGAA
GACCTTGAAGTTGCAATGAGAAAGAGGCGATTGCCAAGGAGGTATGCTCGGGATTTTTTA
CGGCGCACCAGAAGTAACTTGTTTTCAAAATCAATTGGGTGGAAACAATTTCTATCCTTG
ATGGAGCAGAAGGAGCCAACAATATTGCGGGCATACACCACCCTATGTTTGAGCAAGTCT
GGGACACTTCACAAAAATCAAATTCTCACATCTTTAAAAGGTGCAGGCCTTCCGGCCAAT
GAAGATAATGCTGCTGCCATGCTGCGGTACCTAAATGCGGATTCAGAAGAATCAATCTCC
TACAGCCATTTTCGCAATTTCATGCTCCTGCTTCCTTCAGAGCGCCTTGAAGATGACCCT
CGGAACATTTGGTTTGAAGCTGCTACTTTGGTTGCTGTTCCCCCACCGGTAGAGATATCA
GCTGGGAGTGTTCTGAAGTCTGCTTTAGCTGGAGGTCTTGCTAGTGCACTTTCTACTTCC
GTGATGCATCCCATTGATTCAATGAAGACACGTGTCCAAGCATCTTCGCTTTCATTTCCA
GATCTCATATCAACACTTCCACAAATTGGGCTCCGAGGACTTTATCGGGGTTCTATCCCC
GCAATTCTTGGTCAGTTTTCAAGCCATGGTTTGAGAACAGGAATATTTGAGGCAAGCAAG
CTTGTGTTAAAAAGTGTTGCTCCAACACTTCCAGATATTCAGGTGCAATCACTCTCTTCC
TTCTGCAGCACCATCCTGGGAACAGCAGTCCGTATACCTTGTGAGGTTCTTAAGCAGCGT
TTGCAGGCTGGAATCTTCAATAATGTAGGGGAGGCCATTGTTGGTACCATGCAAAAAGAT
GGTCCAAAGGGCTTCTTCCGAGGCACTGGAGCCACTCTTTGCCGAGAGGTTCCTTTCTAT
GTTGCTGGAATGTGTCTTTATGCAGAAGCTAAAAAGGCGGCACAGCATGTGTTGAACAGA
GACTTGGAACCATGGGAAACTATTGCAGTGGGAGCGTTGTCTGGAGGGCTTGCAGCAGTT
GTCACAACTCCCTTTGATGTGATGAAGACTCGGATGATGACTGCTCCACCAGGCACCCCA
GTCTCCATGCAGTTGATAGTTTTCTCCATCCTTCGAAATGAGGGACCTCTCGGACTGTTC
AAGGGTGCGATCCCCCGCTTCTTCTGGATTGCTCCTCTCGGAGCAATGAACTTTGCAGGC
TATGAGCTCGCCAAGAAAGCAATGATCCAAACTGAGAGTGACTCCACAGACTCTGTACAT
GAGAAGAGAACCACAGTGGGTTCCAGAGGATGA

Peptide Sequence

PEP ID

Os11t0103700-01

PEP Infomation

pep chromosome:IRGSP-1.0:11:144247:149101:-1 gene:Os11g0103700 transcript:Os11t0103700-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:EF-Hand type domain containing protein. (Os11t0103700-01)

Sequence

MSGSDHLLDALLAAARAALSHLHLPFPGSNPKPHYSDDLHLLGVGVAHFIHRSPPFTTRA
CFRRTKHPPPPPPGPPPHQLLLCIGIAFHNLLDNHLLHHFHTLLIHANKPHFDAFLSNLP
FAKLKVAPPPQPSASVSPAPPTPAQTGDKEDTDTAANHSPRSTLPVRLLNIPVDRLRSTL
STLSLTDLIDLVARSLPSPDTHPDKKKLFSVHDFFRYAEFEGKRFFEELDRDGDGQVTLE
DLEVAMRKRRLPRRYARDFLRRTRSNLFSKSIGWKQFLSLMEQKEPTILRAYTTLCLSKS
GTLHKNQILTSLKGAGLPANEDNAAAMLRYLNADSEESISYSHFRNFMLLLPSERLEDDP
RNIWFEAATLVAVPPPVEISAGSVLKSALAGGLASALSTSVMHPIDSMKTRVQASSLSFP
DLISTLPQIGLRGLYRGSIPAILGQFSSHGLRTGIFEASKLVLKSVAPTLPDIQVQSLSS
FCSTILGTAVRIPCEVLKQRLQAGIFNNVGEAIVGTMQKDGPKGFFRGTGATLCREVPFY
VAGMCLYAEAKKAAQHVLNRDLEPWETIAVGALSGGLAAVVTTPFDVMKTRMMTAPPGTP
VSMQLIVFSILRNEGPLGLFKGAIPRFFWIAPLGAMNFAGYELAKKAMIQTESDSTDSVH
EKRTTVGSRG

Transcript Sequence

Transcript ID

Os11t0103700-01

Transcript Infomation

cdna chromosome:IRGSP-1.0:11:144247:149101:-1 gene:Os11g0103700 gene_biotype:protein_coding transcript_biotype:protein_coding description:EF-Hand type domain containing protein. (Os11t0103700-01)

Sequence

CTGATGGGGTCGCAGCTTCTCGACCTCCCGTACTCGTTTCCTTGTCGCCTCTTCTTCTTC
CTCCTCCGGCTCCGCTCCGCCGTAAATCCTCCTCCTCCTCCTATATAATCATCAAAAGCT
TAGCTTAGCAGTAGGCCAGTAGCAGTAGCGATGCCGTGACGGATCCTCCACCACCACCAC
CTCGATCGTCAAATCCTCTAGCTTGTCTTTTGTTTTTGATTGACGAGACGAGCATGTCCG
GCTCCGACCATCTCTTGGACGCCCTCCTCGCCGCCGCCCGCGCCGCCCTTTCCCACCTCC
ACCTTCCCTTTCCCGGATCCAATCCCAAGCCCCACTACTCTGATGACCTCCATCTTCTTG
GAGTTGGAGTAGCTCATTTCATCCACAGATCCCCCCCCTTCACAACTAGGGCATGCTTCC
GCCGAACCAAACACCCACCACCACCACCACCAGGTCCACCACCGCACCAGCTCCTTCTCT
GCATTGGCATTGCCTTCCATAACCTGCTGGACAACCATCTTCTCCACCACTTCCACACCC
TACTCATCCATGCAAACAAGCCCCATTTTGATGCCTTCCTCTCCAACCTGCCTTTTGCCA
AGCTTAAGGTTGCCCCACCGCCTCAACCGTCTGCGTCTGTCTCCCCTGCACCTCCAACTC
CAGCTCAAACTGGGGACAAGGAAGACACTGACACTGCTGCTAATCACTCTCCACGGTCGA
CACTGCCTGTTCGCCTGCTCAACATCCCTGTGGACCGCCTACGCTCCACACTTTCCACGC
TTTCACTCACCGACTTGATTGACCTGGTTGCCAGGTCCTTGCCATCCCCTGATACTCATC
CAGACAAGAAGAAGCTCTTCTCTGTACACGACTTCTTCAGATATGCGGAGTTTGAAGGAA
AGCGATTCTTTGAGGAGTTGGATAGAGATGGTGATGGCCAAGTCACCCTGGAAGACCTTG
AAGTTGCAATGAGAAAGAGGCGATTGCCAAGGAGGTATGCTCGGGATTTTTTACGGCGCA
CCAGAAGTAACTTGTTTTCAAAATCAATTGGGTGGAAACAATTTCTATCCTTGATGGAGC
AGAAGGAGCCAACAATATTGCGGGCATACACCACCCTATGTTTGAGCAAGTCTGGGACAC
TTCACAAAAATCAAATTCTCACATCTTTAAAAGGTGCAGGCCTTCCGGCCAATGAAGATA
ATGCTGCTGCCATGCTGCGGTACCTAAATGCGGATTCAGAAGAATCAATCTCCTACAGCC
ATTTTCGCAATTTCATGCTCCTGCTTCCTTCAGAGCGCCTTGAAGATGACCCTCGGAACA
TTTGGTTTGAAGCTGCTACTTTGGTTGCTGTTCCCCCACCGGTAGAGATATCAGCTGGGA
GTGTTCTGAAGTCTGCTTTAGCTGGAGGTCTTGCTAGTGCACTTTCTACTTCCGTGATGC
ATCCCATTGATTCAATGAAGACACGTGTCCAAGCATCTTCGCTTTCATTTCCAGATCTCA
TATCAACACTTCCACAAATTGGGCTCCGAGGACTTTATCGGGGTTCTATCCCCGCAATTC
TTGGTCAGTTTTCAAGCCATGGTTTGAGAACAGGAATATTTGAGGCAAGCAAGCTTGTGT
TAAAAAGTGTTGCTCCAACACTTCCAGATATTCAGGTGCAATCACTCTCTTCCTTCTGCA
GCACCATCCTGGGAACAGCAGTCCGTATACCTTGTGAGGTTCTTAAGCAGCGTTTGCAGG
CTGGAATCTTCAATAATGTAGGGGAGGCCATTGTTGGTACCATGCAAAAAGATGGTCCAA
AGGGCTTCTTCCGAGGCACTGGAGCCACTCTTTGCCGAGAGGTTCCTTTCTATGTTGCTG
GAATGTGTCTTTATGCAGAAGCTAAAAAGGCGGCACAGCATGTGTTGAACAGAGACTTGG
AACCATGGGAAACTATTGCAGTGGGAGCGTTGTCTGGAGGGCTTGCAGCAGTTGTCACAA
CTCCCTTTGATGTGATGAAGACTCGGATGATGACTGCTCCACCAGGCACCCCAGTCTCCA
TGCAGTTGATAGTTTTCTCCATCCTTCGAAATGAGGGACCTCTCGGACTGTTCAAGGGTG
CGATCCCCCGCTTCTTCTGGATTGCTCCTCTCGGAGCAATGAACTTTGCAGGCTATGAGC
TCGCCAAGAAAGCAATGATCCAAACTGAGAGTGACTCCACAGACTCTGTACATGAGAAGA
GAACCACAGTGGGTTCCAGAGGATGACAGATCCAAATTCACCTGGTTACTCTATATGGTG
TAAAGAAAGGACAAGCCATGCAACAGAAATGTTTTTGCCCTTGTTGCAAAGAATTAGAAC
CATTTTTTGGCATTGCCTTCGTGATACATGTACCAAATGTTAGGTCCTTTTATATCCTTC
ACATCCTCCCCAACAGAGGGAAATTTGTCGAATTCCCATTACCATAGGCCTTTATTATAC
CACTGTATAGTAGATGACAGAACTACAGGAGTAGACGTGCTGCCCTTTCTTGCACAGTTC
ACTTCATCTGTTGTTATTTCTTTAGTAATCCAGAGCCTTGATGACATGTTTATT