Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os11t0100200-00
CDS Infomation

cds chromosome:IRGSP-1.0:11:4400:7050:1 gene:Os11g0100200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to ALY protein. (Os11t0100200-00)
Sequence

CTGGACATGTCCCTCGACGACCTCATCACCAACAAGTACAAGCGCCGCTCCCGTCCAGAT
CCAGCGCCCTCTGCCCGCCGCTTCCACTCCCGCGCCGCCACCCGCGCTGCTGCCGCTCCC
TATCACGCCATCACCTTTCAGGCGCCGCCCACGGCCTACACCCACCCGACGCCCGTCGAG
ACCGGCACCAAGCTCCACATCTCCAACCTCGACTACGCCGTCTCCAATGAGGACATCAAG
GAACTCTTCTCTGAGGTTGGCGATGTCAAGCGTTACTCTATTAACTATGACAAGAGTGGA
AGATCCAAGGGAACTGCAGAGGTTGTATTTTCCAGAAAATCTGATGCCCTGGCTGCTGTT
AAGAGATACAACAATGTGCAGCTGGATGGCAAACCTATGAAACTTGAGCTCATTGGTATA
AATATTGAGCCACCACCACCTGCTATGTTTGGTTTCGCTGCACCAGCTGGATACTTCGAT
TTTCCTCCCAAAAGGGGTGGAAGAGGATGGCCTCGGGGCAGGGGTGGATTTGGTGGGCGT
GGTCGGGGTCATGTGGGTCGTGGGCGAGGGAGGGGAGACCGTGGAAGTCGGAAGATTTCT
GCTGAAGACCTGGATGCTGACTTGGACAAGTACCATGCGGAAGGAATGCAAATGAGCTAG

Peptide Sequence

PEP ID

Os11t0100200-00
PEP Infomation

pep chromosome:IRGSP-1.0:11:4400:7050:1 gene:Os11g0100200 transcript:Os11t0100200-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to ALY protein. (Os11t0100200-00)
Sequence

LDMSLDDLITNKYKRRSRPDPAPSARRFHSRAATRAAAAPYHAITFQAPPTAYTHPTPVE
TGTKLHISNLDYAVSNEDIKELFSEVGDVKRYSINYDKSGRSKGTAEVVFSRKSDALAAV
KRYNNVQLDGKPMKLELIGINIEPPPPAMFGFAAPAGYFDFPPKRGGRGWPRGRGGFGGR
GRGHVGRGRGRGDRGSRKISAEDLDADLDKYHAEGMQMS

Transcript Sequence

Transcript ID

Os11t0100200-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:11:4400:7050:1 gene:Os11g0100200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to ALY protein. (Os11t0100200-00)
Sequence

GCTGGACATGTCCCTCGACGACCTCATCACCAACAAGTACAAGCGCCGCTCCCGTCCAGA
TCCAGCGCCCTCTGCCCGCCGCTTCCACTCCCGCGCCGCCACCCGCGCTGCTGCCGCTCC
CTATCACGCCATCACCTTTCAGGCGCCGCCCACGGCCTACACCCACCCGACGCCCGTCGA
GACCGGCACCAAGCTCCACATCTCCAACCTCGACTACGCCGTCTCCAATGAGGACATCAA
GGAACTCTTCTCTGAGGTTGGCGATGTCAAGCGTTACTCTATTAACTATGACAAGAGTGG
AAGATCCAAGGGAACTGCAGAGGTTGTATTTTCCAGAAAATCTGATGCCCTGGCTGCTGT
TAAGAGATACAACAATGTGCAGCTGGATGGCAAACCTATGAAACTTGAGCTCATTGGTAT
AAATATTGAGCCACCACCACCTGCTATGTTTGGTTTCGCTGCACCAGCTGGATACTTCGA
TTTTCCTCCCAAAAGGGGTGGAAGAGGATGGCCTCGGGGCAGGGGTGGATTTGGTGGGCG
TGGTCGGGGTCATGTGGGTCGTGGGCGAGGGAGGGGAGACCGTGGAAGTCGGAAGATTTC
TGCTGAAGACCTGGATGCTGACTTGGACAAGTACCATGCGGAAGGAATGCAAATGAGCTA
GATGACCCTCATGCTTTGTTGCCTTGCCTTGATTGCATTAGGTAGAGACAGGGGGACAAA
CTAGTAGGCCTTCCTTGGTCTCCTTGTTAGTATTTTGTAGGGATAGATGCAGACCAACAT
ATGTATACTTTGTTTAGATGGTGTCATAATTTTGAGCAGGGAATGGCTAAGCTTAACCTG
GTAGGTAGAAGCTAGCTCATAATATGTAACACGGAGGGAGCACAACTTTGAACTTTTATA
GCTAGTGTTGAACTTTTAGCTAGTGTGGGACTGTGGGTTGATGGACACACAAGCAAAGCA
AGCATGCAGCTTGGCAGCCTGGCAAGAGGATTGAATTGATT