Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os10t0580800-01
CDS Infomation	cds chromosome:IRGSP-1.0:10:23190161:23192200:1 gene:Os10g0580800 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:CHLOROPLAST PROTEASE 4 description:Similar to NClpP4 (Fragment). (Os10t0580800-01)
Sequence	ATGTCGGCTGCGAGTGCGAGTGCCACTGCCTCCCTCTCCGCGGCGGCGGCGGTGGCGGTG GCGGCGGCCGCTCTCCGCCCCACGCAGCAGCGACGCCTGCGCGTTGTCGCGCCACCGCGC CCCCTCAGGCTCACCAGTCTCAACCCCCCTCGCGCGGCTTCCGCCCCCTCTACTCCTCTG TGGGAGGCCGGCGTCCGAGCTGAGTCGTCCGACTCGCCCGGAGCCGGAGCCGGGGGTGAC GTCATGGGCCTCCTCCTCCGGGAGCGCATCGTCTTCCTCGGCAACGAGATAGAGGACTTC CTCGCCGACGCAGTCGTCAGCCAGCTCCTCCTCCTCGACGCCGTCGACCCCAACTCTGAC ATCCGCCTCTTCGTCAACTCCCCTGGGGGATCACTCAGCGCAACAATGGCCATCTATGAT GTAATGCAGCTCGTGAGGGCAGATGTTTCCACTATTGGATTGGGCATAGCTGGTTCCACT GCTTCTATAATCCTTGGTGGTGGCACAAAGGGCAAGCGATTCGCCATGCCCAACACCAGG ATAATGATCCATCAGCCCGTTGGAGGCGCAAGTGGGCAGGCCTTGGATGTCGAGGTCCAG GCCAAGGAGATATTGACTAACAAGAGGAATGTCATCCGGCTTATATCAGGTTTCACAGGA CGCACTCCGGAGCAGGTTGAGAAAGACATTGATAGAGACAGATATATGGGTCCTCTTGAG GCTGTTGATTACGGGCTCATCGACAGTGTAATCGACGGAGACAGTATCATCCCACTTGAG CCTGTCCCGGAGAGGGTGAAGCCGAAATACAACTACGAGGAACTGTACAAGGATCCACAG AAGTTCCTTACACCTGATGTCCCAGATGATGAGATATACTAG

Peptide Sequence

PEP ID	Os10t0580800-01
PEP Infomation	pep chromosome:IRGSP-1.0:10:23190161:23192200:1 gene:Os10g0580800 transcript:Os10t0580800-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:CHLOROPLAST PROTEASE 4 description:Similar to NClpP4 (Fragment). (Os10t0580800-01)
Sequence	MSAASASATASLSAAAAVAVAAAALRPTQQRRLRVVAPPRPLRLTSLNPPRAASAPSTPL WEAGVRAESSDSPGAGAGGDVMGLLLRERIVFLGNEIEDFLADAVVSQLLLLDAVDPNSD IRLFVNSPGGSLSATMAIYDVMQLVRADVSTIGLGIAGSTASIILGGGTKGKRFAMPNTR IMIHQPVGGASGQALDVEVQAKEILTNKRNVIRLISGFTGRTPEQVEKDIDRDRYMGPLE AVDYGLIDSVIDGDSIIPLEPVPERVKPKYNYEELYKDPQKFLTPDVPDDEIY

Transcript Sequence

Transcript ID	Os10t0580800-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:10:23190161:23192200:1 gene:Os10g0580800 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:CHLOROPLAST PROTEASE 4 description:Similar to NClpP4 (Fragment). (Os10t0580800-01)
Sequence	ATAATTGCGAGCGATGTCGGCTGCGAGTGCGAGTGCCACTGCCTCCCTCTCCGCGGCGGC GGCGGTGGCGGTGGCGGCGGCCGCTCTCCGCCCCACGCAGCAGCGACGCCTGCGCGTTGT CGCGCCACCGCGCCCCCTCAGGCTCACCAGTCTCAACCCCCCTCGCGCGGCTTCCGCCCC CTCTACTCCTCTGTGGGAGGCCGGCGTCCGAGCTGAGTCGTCCGACTCGCCCGGAGCCGG AGCCGGGGGTGACGTCATGGGCCTCCTCCTCCGGGAGCGCATCGTCTTCCTCGGCAACGA GATAGAGGACTTCCTCGCCGACGCAGTCGTCAGCCAGCTCCTCCTCCTCGACGCCGTCGA CCCCAACTCTGACATCCGCCTCTTCGTCAACTCCCCTGGGGGATCACTCAGCGCAACAAT GGCCATCTATGATGTAATGCAGCTCGTGAGGGCAGATGTTTCCACTATTGGATTGGGCAT AGCTGGTTCCACTGCTTCTATAATCCTTGGTGGTGGCACAAAGGGCAAGCGATTCGCCAT GCCCAACACCAGGATAATGATCCATCAGCCCGTTGGAGGCGCAAGTGGGCAGGCCTTGGA TGTCGAGGTCCAGGCCAAGGAGATATTGACTAACAAGAGGAATGTCATCCGGCTTATATC AGGTTTCACAGGACGCACTCCGGAGCAGGTTGAGAAAGACATTGATAGAGACAGATATAT GGGTCCTCTTGAGGCTGTTGATTACGGGCTCATCGACAGTGTAATCGACGGAGACAGTAT CATCCCACTTGAGCCTGTCCCGGAGAGGGTGAAGCCGAAATACAACTACGAGGAACTGTA CAAGGATCCACAGAAGTTCCTTACACCTGATGTCCCAGATGATGAGATATACTAGGTAAT GAGCCTGCCTGCCTGTCGTTTGCATTTCGCACGGCAAGGGGGCTGCTTGCAATCAAAGAC GATGCTCCTAGTCCTAGCACTAGTTGATTTTTCCTGTCACATGTTAACCAACTAGTGCCA TATTACGATTGTTGAGCACGCAGTTAGACTTATTGGTTGTGTTTGTCGTTGAAATTGCAT GCGTTTGGTGTGCGAATGTGGATGGATTGATGAGGTGGTTTGTGT