Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os10t0580400-01
CDS Infomation	cds chromosome:IRGSP-1.0:10:23156882:23159586:1 gene:Os10g0580400 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:high-affinity urea transporter OsDUR3 description:High-affinity urea transporter, Effective urea acquisition and utilisation, Effective use of low external urea as a N source (Os10t0580400-01)
Sequence	ATGGCGAGCGGCGTGTGCCCTCCTGCGGAGCTGGGGTTCGGGGCGGAGTACTACTCGGTG GTGAACGGGGTGTGCAGCCGCGCCGGCAGCTACTTCGGCGGAAGGCCGGTGCTCACGCAG GCCGTCGGGTACGCCGTCGTGCTCGGCTTCGGCGCCTTCTTCGCGCTCTTCACCTCCTTC CTGGTGTGGCTTGAGAAGCGTTACGTCGGGTCGCAGCACACGTCGGAGTGGTTCAACACG GCGGGGCGCAGCGTGAAGACGGGTCTGATCGCCAGCGTGATCGTGTCGCAGTGGACCTGG GCCGCCACCATCCTGCAGAGCTCGAACGTGGCATGGCAGTACGGGGTGAGCGGGCCATTC TGGTACGCCAGCGGCGCCACCATCCAGGTGCTCCTCTTCGGCGTGATGGCCATCGAGATC AAGCGCAAGGCCCCCAACGCCCACACCGTCTGCGAGATCGTCCGCGCCCGATGGGGCACC CCCGCCCACCTCGTCTTCCTCACCTTCTGCCTCCTCACCAACGTCATCGTCACCGCCATG CTCCTCCTTGGCGGCTCCGCCGTCGTCAACGCCCTCACCGGAGTCAACGTCTACGCCGCC AGCTTCCTCATCCCGCTCGGCGTCGTCGTCTACACACTCGCCGGCGGCCTCAAGGCCACC TTCCTCGCCAGCTACATCCACTCCGTCGTCGTGCACGCGGTGCTCGTCGTCTTCGTCTTC CTCGTCTACACCTCCAGCTCCAAACTCGGGAGCCCGCGTGTGGTGTATGATCGCCTCATG GCCGTCGCCAGCGCCGCGCGCGACTGCTCCGCCGACCTCTCGCGCAACGGCCAGGCGTGC GGCCCCGTCGCCGGCAACTTCAAGGGCTCCTACCTCACCATGCTCAGCTCGGGGGGGCTC GTCTTCGGCATCATCAACATCGTCGGCAACTTTGGAACGGTGTTCGTAGACAACGGCTAC TGGATGAGCGCCATCGCCGCCCGGCCATCCTCCACCCACAAGGGCTACCTGCTGGGCGGC CTCGTGTGGTTCGCCGTTCCCTTCTCGCTGGCCACCTCGCTCGGCCTCGGCGCGCTCGCC CTGGACCTCCCGCTCACCGCCGCCGAGGCAGCCAAGGGCCTGGTGCCCCCGGCCACCGCA ACAGCGCTCATGGGCAAGTCCGGCTCCGTCCTGCTACTCACCATGCTCTTCATGGCCGTC ACATCCGCCGGCTCCGCCGAGCTGGTGGCCGTCTCCTCCCTCTGCACCTACGACATCTAC CGGACGTACCTCAACCCGGGCGCCTCCGGCAAGCAGATACTCCGCGTGTCGAGGGCCGTC GTGCTCGGCTTCGGCTGCTTCATGGGGGTCCTCGCCGTGGTGCTCAACGTGGCGGGGGTG TCCCTGGGGTGGATGTACCTGGCCATGGGAGTCATTGTGGGATCCGCAGTCATCCCCATC GCCCTGCTGCTGCTGTGGAGCAAGGCCAACGCGGTGGGCGCCATGGGCGGCGCGGTGTCC GGCTGCGCGCTGGGCGTGGCCGTGTGGCTCACGGTGGCCAAGGTGCAGTACGGGCGCGTG AACCTGGACACCACAGGTCGGAACGCGCCGATGCTGGCGGGCAACCTGGTGTCCATCCTG GTGGGCGGGGCGGTGCACGCGGCGTGCAGCCTGCTGCGCCCGCAGCACTACGACTGGGGG ACCAGCCGGGAGATGATCACCACGGTGGAGAGCGTGCATGCCGCGCTGGACGACGAGCTC AAGGAGGAGCGCCTGGTGCACGCCAAGCGTTGGATCGTCAGGTGGGGCCTCGTCTTCACC GCCGTCATCGTCGTGGCGTGGCCTGCGCTGTCTCTGCCGGCGAGGAGGTACAGCCTTGGC TACTTCACGCTGTGGGCCGCGGTGGCGATCGCGTGGGGGACTGTGGGCTCGGTCGTCATC ATCCTTCTGCCGGTGGCCGAGAGCTGGACCACCATCACCAAGGTCTGCGCCGGCATGTTC ACCAACGACGCTGTGTACGACCGCCTCGACGACGTCAACCTCCGCCTCCGCGCCATCATG GGCGCCATGCCCGAGGCTGAGAAGCGCTACCGCCAGCTACACGAGACGGAGATGCACCCT GCCGGAACCCATCCGGCCAACGACGACGACGACGACAATAATAATAATCAGATGATGCAC TCCTGA

Peptide Sequence

PEP ID	Os10t0580400-01
PEP Infomation	pep chromosome:IRGSP-1.0:10:23156882:23159586:1 gene:Os10g0580400 transcript:Os10t0580400-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:high-affinity urea transporter OsDUR3 description:High-affinity urea transporter, Effective urea acquisition and utilisation, Effective use of low external urea as a N source (Os10t0580400-01)
Sequence	MASGVCPPAELGFGAEYYSVVNGVCSRAGSYFGGRPVLTQAVGYAVVLGFGAFFALFTSF LVWLEKRYVGSQHTSEWFNTAGRSVKTGLIASVIVSQWTWAATILQSSNVAWQYGVSGPF WYASGATIQVLLFGVMAIEIKRKAPNAHTVCEIVRARWGTPAHLVFLTFCLLTNVIVTAM LLLGGSAVVNALTGVNVYAASFLIPLGVVVYTLAGGLKATFLASYIHSVVVHAVLVVFVF LVYTSSSKLGSPRVVYDRLMAVASAARDCSADLSRNGQACGPVAGNFKGSYLTMLSSGGL VFGIINIVGNFGTVFVDNGYWMSAIAARPSSTHKGYLLGGLVWFAVPFSLATSLGLGALA LDLPLTAAEAAKGLVPPATATALMGKSGSVLLLTMLFMAVTSAGSAELVAVSSLCTYDIY RTYLNPGASGKQILRVSRAVVLGFGCFMGVLAVVLNVAGVSLGWMYLAMGVIVGSAVIPI ALLLLWSKANAVGAMGGAVSGCALGVAVWLTVAKVQYGRVNLDTTGRNAPMLAGNLVSIL VGGAVHAACSLLRPQHYDWGTSREMITTVESVHAALDDELKEERLVHAKRWIVRWGLVFT AVIVVAWPALSLPARRYSLGYFTLWAAVAIAWGTVGSVVIILLPVAESWTTITKVCAGMF TNDAVYDRLDDVNLRLRAIMGAMPEAEKRYRQLHETEMHPAGTHPANDDDDDNNNNQMMH S

Transcript Sequence

Transcript ID	Os10t0580400-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:10:23156882:23159586:1 gene:Os10g0580400 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:high-affinity urea transporter OsDUR3 description:High-affinity urea transporter, Effective urea acquisition and utilisation, Effective use of low external urea as a N source (Os10t0580400-01)
Sequence	ATCTCTGATCTGCTAGCTAGTACAGTACATATCCATCTATCCGTCTGTTAGAGTAAAAAT TCCCCATTTAATTAGGATCGATCGATTGGATTGAAGCTGGCGATGGCGAGCGGCGTGTGC CCTCCTGCGGAGCTGGGGTTCGGGGCGGAGTACTACTCGGTGGTGAACGGGGTGTGCAGC CGCGCCGGCAGCTACTTCGGCGGAAGGCCGGTGCTCACGCAGGCCGTCGGGTACGCCGTC GTGCTCGGCTTCGGCGCCTTCTTCGCGCTCTTCACCTCCTTCCTGGTGTGGCTTGAGAAG CGTTACGTCGGGTCGCAGCACACGTCGGAGTGGTTCAACACGGCGGGGCGCAGCGTGAAG ACGGGTCTGATCGCCAGCGTGATCGTGTCGCAGTGGACCTGGGCCGCCACCATCCTGCAG AGCTCGAACGTGGCATGGCAGTACGGGGTGAGCGGGCCATTCTGGTACGCCAGCGGCGCC ACCATCCAGGTGCTCCTCTTCGGCGTGATGGCCATCGAGATCAAGCGCAAGGCCCCCAAC GCCCACACCGTCTGCGAGATCGTCCGCGCCCGATGGGGCACCCCCGCCCACCTCGTCTTC CTCACCTTCTGCCTCCTCACCAACGTCATCGTCACCGCCATGCTCCTCCTTGGCGGCTCC GCCGTCGTCAACGCCCTCACCGGAGTCAACGTCTACGCCGCCAGCTTCCTCATCCCGCTC GGCGTCGTCGTCTACACACTCGCCGGCGGCCTCAAGGCCACCTTCCTCGCCAGCTACATC CACTCCGTCGTCGTGCACGCGGTGCTCGTCGTCTTCGTCTTCCTCGTCTACACCTCCAGC TCCAAACTCGGGAGCCCGCGTGTGGTGTATGATCGCCTCATGGCCGTCGCCAGCGCCGCG CGCGACTGCTCCGCCGACCTCTCGCGCAACGGCCAGGCGTGCGGCCCCGTCGCCGGCAAC TTCAAGGGCTCCTACCTCACCATGCTCAGCTCGGGGGGGCTCGTCTTCGGCATCATCAAC ATCGTCGGCAACTTTGGAACGGTGTTCGTAGACAACGGCTACTGGATGAGCGCCATCGCC GCCCGGCCATCCTCCACCCACAAGGGCTACCTGCTGGGCGGCCTCGTGTGGTTCGCCGTT CCCTTCTCGCTGGCCACCTCGCTCGGCCTCGGCGCGCTCGCCCTGGACCTCCCGCTCACC GCCGCCGAGGCAGCCAAGGGCCTGGTGCCCCCGGCCACCGCAACAGCGCTCATGGGCAAG TCCGGCTCCGTCCTGCTACTCACCATGCTCTTCATGGCCGTCACATCCGCCGGCTCCGCC GAGCTGGTGGCCGTCTCCTCCCTCTGCACCTACGACATCTACCGGACGTACCTCAACCCG GGCGCCTCCGGCAAGCAGATACTCCGCGTGTCGAGGGCCGTCGTGCTCGGCTTCGGCTGC TTCATGGGGGTCCTCGCCGTGGTGCTCAACGTGGCGGGGGTGTCCCTGGGGTGGATGTAC CTGGCCATGGGAGTCATTGTGGGATCCGCAGTCATCCCCATCGCCCTGCTGCTGCTGTGG AGCAAGGCCAACGCGGTGGGCGCCATGGGCGGCGCGGTGTCCGGCTGCGCGCTGGGCGTG GCCGTGTGGCTCACGGTGGCCAAGGTGCAGTACGGGCGCGTGAACCTGGACACCACAGGT CGGAACGCGCCGATGCTGGCGGGCAACCTGGTGTCCATCCTGGTGGGCGGGGCGGTGCAC GCGGCGTGCAGCCTGCTGCGCCCGCAGCACTACGACTGGGGGACCAGCCGGGAGATGATC ACCACGGTGGAGAGCGTGCATGCCGCGCTGGACGACGAGCTCAAGGAGGAGCGCCTGGTG CACGCCAAGCGTTGGATCGTCAGGTGGGGCCTCGTCTTCACCGCCGTCATCGTCGTGGCG TGGCCTGCGCTGTCTCTGCCGGCGAGGAGGTACAGCCTTGGCTACTTCACGCTGTGGGCC GCGGTGGCGATCGCGTGGGGGACTGTGGGCTCGGTCGTCATCATCCTTCTGCCGGTGGCC GAGAGCTGGACCACCATCACCAAGGTCTGCGCCGGCATGTTCACCAACGACGCTGTGTAC GACCGCCTCGACGACGTCAACCTCCGCCTCCGCGCCATCATGGGCGCCATGCCCGAGGCT GAGAAGCGCTACCGCCAGCTACACGAGACGGAGATGCACCCTGCCGGAACCCATCCGGCC AACGACGACGACGACGACAATAATAATAATCAGATGATGCACTCCTGATTCCATCCAATC ATCCATCCATCCATCCATAGACTAATTAAGATTTCTACGTACTACATACTACTCGTACGT ACACTTTTTATATACACACATATATGTATGGAGAGCCCATATAATTAAAAAAGAGTGTGC ATCAGCAGCGTGTGCATGATAGTGAACACGTTTTGTGTATACTACAAAATAACCGATGTT TCTCGTTAGCTGATATGTTGGTTGATAATAAACAGGCAGCCTACGTCATCTTC