Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os10t0579800-02
CDS Infomation	cds chromosome:IRGSP-1.0:10:23129162:23131939:1 gene:Os10g0579800 gene_biotype:protein_coding transcript_biotype:protein_coding description:TGF-beta receptor, type I/II extracellular region family protein. (Os10t0579800-01);TGF-beta receptor, type I/II extracellular region family protein. (Os10t0579800-02)
Sequence	ATGAGCATGAATAATATGATGGGTAGTCCACCAAGTCGTAGCAGGGGCAGGGATGAGAAG AAGAAGAGGTGGAAGTGGAAGCTTGGGCCGGCCACCATCCTGGGGTTCGAGCTGCTGGAG AGCATCGCCTTCTCCGGCGTGGCGCTGAACCTGGTGGTGTACCTGGCCACCGTCCTTCAC GGCACCCTCGCCTTCAACGCCGCCCATGTCGACACCTGGAATGGCACCACCTTCATCGTC CCCGTCATCGGGGCTTTCCTCGCCGACTCCTACTGGGGAAAGTACAGGACCATCCTCGCC TCCCTCCTCTTCTACCTCGCCGGCCTTGTGCTCCTCACCGTCTCCGCCGCTGTCCCCTCC CTGCGCCCGGCGCCGTGCACCGGCGTCCCATGCTCACCGGCCACCGGGACCCAGTTCTCC GTCTTCTTCCTCGCGCTCTACCTCACCTCCATCGGAACAGGCGGCGTCAAGTCTGCGCTG CTCCCCTTCGGGGCAGAGCAGTACGAGCGCGACGACCACGACACTGATCAGGAGGGCGCC CCGGCCCCGGAGAAGACGAAGCAATCCTTCTTCAGCTGGTTCTTCGGCGCCATCAACCTC GGCATCTTCGTGGCCGGGACGCTTGTATCGTGGGTGGAGCAGAACGTGTCGTGGGCGCTG GGCTTCGGCATCGCCACGCTCTGCCTGCTCATCGCGTCGGCGGCGTTCCTGGCAGCCACG CCCTGCTACAGGGTGCGCCTCCCCACGGGGGACACCCCCATCAAGGCCATCCTCAGGGTG CTGGTGGCCGCCTTCAGGAACAGGACCCGGACGCTGCCTCCCGACGCCGACGGCGATGGC CTGTACGAAGTCGACGACGACAAGAACAAGAACGGCGGCGATGATGAGAAGCTGGCGCAC ACCGAGGGGTTACGGTGGCTGGACAAGGCCGCCGTGAGGGTGGACGGGGGCGGCGTGTGG GAGGTGTGCACGGTGAGCGAGGTGGAGCGCGTGAAGGTGCTGGCGCGGATAGTGCCCATC TGGGTGACGTGCGTGCTGTACGCGGCGTCGCTGGGGCAGATGACCACCACCTTCATCCAG CAGGGGATGGCCATGGACACGAGGGTGTTCGGGGGGAGGTTCCGGGTGCCGGTGGCGTCG CTGGTGTCGGTGGAGGTGGTGTTCATGCTGCTGTGGGTGCTGCTCCACGACGTGGTGGTG ATGCCGGTGGCGAGGAGGTGGTGGCGCTCGGGTGGTCTGACGCAGCTGCAGCGGATGGGC GTGGGGCGTGTGCTGGTGGTGGTGGCCATGGCGACGGCTGCTCTGGTGGAGAGGCGGAGG CTGCGAGGGGAGAAGCGGTCGATGAGCATCTTGTGGCAGGTGCCACAGTTCGTGGTGCTG GCTGGATCCGACGTGTTCAGCGGCATCGCGCAGCTGGAGTTCTTCTACGGCGAGGCGCCC GGGTCCATGCGCAGCATCTGCTCCGCTTTCTCCTTCCTCGCCCTCTCCCTCGGCTTCTAC GTCAACTCGCTCGTCGTCACCATCGTGGCGGCGGTCACCAAGAGGAGCGACGGCTCCGGC GGCTGGCTGGCGCCGGACCTGGACACGGCCCACCTCGACTACTACTTCTGGCTCTGGGCC CTCATCAGCCTCGCCAACCTCGCCCTCTACCTGCTGCTCGCCGCCCGCTACAAGTCCAAG AAGCCCTCGCCACCGCATTCTTCTTCTCATCCCTAG

Peptide Sequence

PEP ID	Os10t0579800-02
PEP Infomation	pep chromosome:IRGSP-1.0:10:23129162:23131939:1 gene:Os10g0579800 transcript:Os10t0579800-02 gene_biotype:protein_coding transcript_biotype:protein_coding description:TGF-beta receptor, type I/II extracellular region family protein. (Os10t0579800-01);TGF-beta receptor, type I/II extracellular region family protein. (Os10t0579800-02)
Sequence	MSMNNMMGSPPSRSRGRDEKKKRWKWKLGPATILGFELLESIAFSGVALNLVVYLATVLH GTLAFNAAHVDTWNGTTFIVPVIGAFLADSYWGKYRTILASLLFYLAGLVLLTVSAAVPS LRPAPCTGVPCSPATGTQFSVFFLALYLTSIGTGGVKSALLPFGAEQYERDDHDTDQEGA PAPEKTKQSFFSWFFGAINLGIFVAGTLVSWVEQNVSWALGFGIATLCLLIASAAFLAAT PCYRVRLPTGDTPIKAILRVLVAAFRNRTRTLPPDADGDGLYEVDDDKNKNGGDDEKLAH TEGLRWLDKAAVRVDGGGVWEVCTVSEVERVKVLARIVPIWVTCVLYAASLGQMTTTFIQ QGMAMDTRVFGGRFRVPVASLVSVEVVFMLLWVLLHDVVVMPVARRWWRSGGLTQLQRMG VGRVLVVVAMATAALVERRRLRGEKRSMSILWQVPQFVVLAGSDVFSGIAQLEFFYGEAP GSMRSICSAFSFLALSLGFYVNSLVVTIVAAVTKRSDGSGGWLAPDLDTAHLDYYFWLWA LISLANLALYLLLAARYKSKKPSPPHSSSHP

Transcript Sequence

Transcript ID	Os10t0579800-02
Transcript Infomation	cdna chromosome:IRGSP-1.0:10:23129162:23131939:1 gene:Os10g0579800 gene_biotype:protein_coding transcript_biotype:protein_coding description:TGF-beta receptor, type I/II extracellular region family protein. (Os10t0579800-01);TGF-beta receptor, type I/II extracellular region family protein. (Os10t0579800-02)
Sequence	GCTGCCTCGTATCGTGAAATGAGATACTAGCTAGAAAGGTGGTGGTAGGGGATAGATCCG GGGCGGGCGGCATGAGCATGAATAATATGATGGGTAGTCCACCAAGTCGTAGCAGGGGCA GGGATGAGAAGAAGAAGAGGTGGAAGTGGAAGCTTGGGCCGGCCACCATCCTGGGGTTCG AGCTGCTGGAGAGCATCGCCTTCTCCGGCGTGGCGCTGAACCTGGTGGTGTACCTGGCCA CCGTCCTTCACGGCACCCTCGCCTTCAACGCCGCCCATGTCGACACCTGGAATGGCACCA CCTTCATCGTCCCCGTCATCGGGGCTTTCCTCGCCGACTCCTACTGGGGAAAGTACAGGA CCATCCTCGCCTCCCTCCTCTTCTACCTCGCCGGCCTTGTGCTCCTCACCGTCTCCGCCG CTGTCCCCTCCCTGCGCCCGGCGCCGTGCACCGGCGTCCCATGCTCACCGGCCACCGGGA CCCAGTTCTCCGTCTTCTTCCTCGCGCTCTACCTCACCTCCATCGGAACAGGCGGCGTCA AGTCTGCGCTGCTCCCCTTCGGGGCAGAGCAGTACGAGCGCGACGACCACGACACTGATC AGGAGGGCGCCCCGGCCCCGGAGAAGACGAAGCAATCCTTCTTCAGCTGGTTCTTCGGCG CCATCAACCTCGGCATCTTCGTGGCCGGGACGCTTGTATCGTGGGTGGAGCAGAACGTGT CGTGGGCGCTGGGCTTCGGCATCGCCACGCTCTGCCTGCTCATCGCGTCGGCGGCGTTCC TGGCAGCCACGCCCTGCTACAGGGTGCGCCTCCCCACGGGGGACACCCCCATCAAGGCCA TCCTCAGGGTGCTGGTGGCCGCCTTCAGGAACAGGACCCGGACGCTGCCTCCCGACGCCG ACGGCGATGGCCTGTACGAAGTCGACGACGACAAGAACAAGAACGGCGGCGATGATGAGA AGCTGGCGCACACCGAGGGGTTACGGTGGCTGGACAAGGCCGCCGTGAGGGTGGACGGGG GCGGCGTGTGGGAGGTGTGCACGGTGAGCGAGGTGGAGCGCGTGAAGGTGCTGGCGCGGA TAGTGCCCATCTGGGTGACGTGCGTGCTGTACGCGGCGTCGCTGGGGCAGATGACCACCA CCTTCATCCAGCAGGGGATGGCCATGGACACGAGGGTGTTCGGGGGGAGGTTCCGGGTGC CGGTGGCGTCGCTGGTGTCGGTGGAGGTGGTGTTCATGCTGCTGTGGGTGCTGCTCCACG ACGTGGTGGTGATGCCGGTGGCGAGGAGGTGGTGGCGCTCGGGTGGTCTGACGCAGCTGC AGCGGATGGGCGTGGGGCGTGTGCTGGTGGTGGTGGCCATGGCGACGGCTGCTCTGGTGG AGAGGCGGAGGCTGCGAGGGGAGAAGCGGTCGATGAGCATCTTGTGGCAGGTGCCACAGT TCGTGGTGCTGGCTGGATCCGACGTGTTCAGCGGCATCGCGCAGCTGGAGTTCTTCTACG GCGAGGCGCCCGGGTCCATGCGCAGCATCTGCTCCGCTTTCTCCTTCCTCGCCCTCTCCC TCGGCTTCTACGTCAACTCGCTCGTCGTCACCATCGTGGCGGCGGTCACCAAGAGGAGCG ACGGCTCCGGCGGCTGGCTGGCGCCGGACCTGGACACGGCCCACCTCGACTACTACTTCT GGCTCTGGGCCCTCATCAGCCTCGCCAACCTCGCCCTCTACCTGCTGCTCGCCGCCCGCT ACAAGTCCAAGAAGCCCTCGCCACCGCATTCTTCTTCTCATCCCTAGCCACTACCACTAT CATCTCCTTCTTCTTCCTCCACCATTAATTGTTCATCCATCATCATCATAGACATACCAT ATATACGCACGCATATCTCATCTCATCTGTAAGATGGATCATACATAGTCTGCAGCAGTG CATCTTGTATCTTTCTACCTATAGCCTATAGTTTGCTTCTGAATTTAACATCGGAATCCA GGGAATTGAACTGACGACAAACTTTTCTGCATACGATCGAATTGGTAGCTTTTGGGCAGA AACAGCCGTTTTTTTGACAAATTGACCCTTTTCAAAAACTTATTTCGAAACTAACCCCTG CTAAAAACTTCAACTAAAACTAGGCCGTCGGCTCAGCGCCAAGCGCATTGGCGCTGAGGT TGGCCGTGTCAGCGCCAACGGGACTGGCGCTGACATTGTGCCACCGTGGCGGCCGGGCCG ATCCCCCAGCTGACGTGGCAGCTACCTCAGCGCCAACCGCTTCGGCGCTGAGGTGCCCAA CATCAGCGCCAAGTACGTTGGCGCTGATCTTGGCTACTTTGAGCCCGGCCGAGGCCGCCC CAGCCAGTTAGTCCTCTGTTTTTCCCCAGCCGCCCGCCTAGGGTTCGGTCGCCACCGCGT TCTCCTCGCCCAATCTCCCCCAAAAACCTCTCTAATCGAAGGTGATTTGTGTGGCATTGA GTTTGGGATCGGAAGAGAAGGTAAACCCCTCTATAAACCCTAAGTTCCCCAAAGTTTTAT TGGATATTTTGTATTGTTTTGGTTGTAGACGTGGTTTGATAATAGTTGGCTAAGGATGGA TTATTAGATGGATAATGTGGGTGGGGATGAAGTGTGGAGGTGGCATATCTTTATCCATTT GGTTGTTGTTGATACATTTGACAAAATATATTTGGGATGAATGTTTGGTGATGC