Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os10t0579100-01
CDS Infomation	cds chromosome:IRGSP-1.0:10:23088168:23093415:-1 gene:Os10g0579100 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:HYPEROSMOLALITY-GATED CALCIUM-PERMEABLE CHANNEL 1.4 description:Protein of unknown function DUF221 domain containing protein. (Os10t0579100-01)
Sequence	ATGGCGACGCTGCCGGACCTGGGTGTGTCCGCCTTCATCAACATCTTGGGCGCCTTCGTC TTCCTCCTCATCTTCGCCGCCCTCCGCCTCCAGCCCATCAACGACCGCGTCTACTTCCCC AAGCTCTACCTCACTGGCCAGCGACGCCACCACCCTCACCCTCATGGCTTCGTCAACCTC GACCTCTGCTCCTACCTCCGCTTCCTCGCCTGGGTCCCCGGCGCCCTCCGCATGTCCCAG CCCGACCTCATCCACCACGCCGGCCTCGACTCCGCCGTCTACCTCCGAATCTACACGCTC GGCCTCAAGATATTTTTGCCCATCATGACTGTCGCCTTGCTGGTTCTTATTCCAGTTAAT GTCTCTGGTGGCACGTTACTTAATTTACGAAAAGAAATTGTCTTTAGTGATATTGATAAG CTTTCCATATCAAATGTCAACCCTGGATCCAACAGGTTCTTTATCCATCTATTAATGGCA TATGTGTTCACTTTTTGGACTTGCTTTATGCTATACAAAGAGTATAGCAATGTGGCATTT ATGAGATTGCACTTCCTGGCTTCTCAGAAGCGTTGTGCTGATCAGTTCACTGTGATTGTT AGAAACATACCTCATGTTTCAAGCCATTCAACATCTGAAACAGTGGATGAATTCTTCCGT AGGAATCATCCAGACCACTATCTTGGTCAGCAGGCTGTTTATAACGCAAACAGGTATGCT AAACTTGTGAAGAAAAAAGAGAGGCTTCAAAACTGGTTGGATTACTACCAGCTGAAGTTT GAAAGGCATCCTGGAAAAAGACCAATTGGAAGGACAGGGTGCCTTGGTTTCTGCGGTAGA GAAGTGGATCAAATCGACTATTACCGTGCTAGAATCAGCGAGCTTGATAAGAAGCTTGCA TCTGAGCGTCAAAGAGTTCTCAATGACCCAAAAGCTGTTATGCCAGTTGCTTTTGTGACA TTTGACTCGAGATGGGGAGCTGCTGTATGTGCACAGACACAACAGTCAAAGAATCCTACC CAATGGCTAACTGATTGGGCTCCTGAACCGCGGGATGTATATTGGCAGAATCTTGCCATT CCATTTTTCTCTCTCAGTATCCGCAAGTTCCTGATATCCATTGCAGTTTTTGCTCTGGTG TTCTTCTACATGATACCTATAGCTTTTGTGCAATCACTTGCCAATCTTGAGGGTATTGAA AAAGTTGCACCTTTCCTAAGGCCTGTGATAGACACACCAGTGGTGAAATCCTTCCTGCAG GGTTTCCTTCCGGGTTTGGCTTTGAAGATTTTTCTGTATATCCTCCCAACGGTTTTGATG ATTATGTCAAAGGTTGAAGGTTATGTGTCTTTATCATCTCTGGAAAGGAGGGCTGCTTCA AAATATTACTACTTCATGCTGGTGAATGTATTTCTTGGAAGCATAATCGCTGGCACAGCT TTTGAACAGCTAAATGCATTTTTCCATCAGCCACCTTCACAAATACCAAGGACCATTGGA GTAGCTATACCAATGAAAGCTACATTTTTTATGACATACATAATGGTTGACGGGTGGGCT GGCATCGCGAACGAGATTCTTCGAGTGAAGCCGCTGGTGATATACCACCTGAAGAACATG TTTATTGTGAAGACGGAGCGGGACAGGGAGAGGGCAATGGATCCGGGCAGCATTGGGCTT GCAGAGAACCTCCCATCACTGCAGCTGTATTTTCTTCTTGGGCTTGTGTATGCTGTGGTC ACCCCCATTCTCCTCCCTTTCATTATCATCTTCTTTGCCTTCGCTTTCCTCGTGTACAGA CACCAGATCATCAACGTGTACAACCAAGAATACGAGAGTGCTGCTGCGTTTTGGCCTCAG GTGCACTCTCGCATAATAGCGAGCTTGCTGATCTCGCATGTAACTCTGTTTGGGCTGATG AGCACCATGAAGGCTGCCTACTCCACCCCGCTGCTTATCTTTCTGCCACTCCTCACCATA TGGTTCCACAAGTACTGCAAGAGCCGTTTCGAGCCTGCTTTCCGCAAGTACCCTCTAGAG GAAGCGATGGAGAAGGACAATCTGGAGCGCACGTCGGAGCCAAACCTGAACCTCAAATCG TACCTGCAGAACGCTTACCTGCACCCCATTTTCCACATGTTTGAGCAGCAGCAGCAGCAG GAGCAGGAGCAGCAACGGGAGGAGAAGGTAGAGGTGCGAATCGACAAGGCGCAGCAACAT CATCATCGGCAGGTAGAGGAGGAAGAGGAGGAGAGCAAGAGCAGCCAGGCTACAACACAC TACTACCACCATCACCATGAGCAGACCACAACGACGACACACCACCATTACCATCAGCAT GAGCATATGAGCCACTACCACATGGGCCCCTCCGACACAGCTGACTCACCCTCGCCGCCG CACTTTGTCTACCATTATGGCGTCGACCCTTGA

Peptide Sequence

PEP ID	Os10t0579100-01
PEP Infomation	pep chromosome:IRGSP-1.0:10:23088168:23093415:-1 gene:Os10g0579100 transcript:Os10t0579100-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:HYPEROSMOLALITY-GATED CALCIUM-PERMEABLE CHANNEL 1.4 description:Protein of unknown function DUF221 domain containing protein. (Os10t0579100-01)
Sequence	MATLPDLGVSAFINILGAFVFLLIFAALRLQPINDRVYFPKLYLTGQRRHHPHPHGFVNL DLCSYLRFLAWVPGALRMSQPDLIHHAGLDSAVYLRIYTLGLKIFLPIMTVALLVLIPVN VSGGTLLNLRKEIVFSDIDKLSISNVNPGSNRFFIHLLMAYVFTFWTCFMLYKEYSNVAF MRLHFLASQKRCADQFTVIVRNIPHVSSHSTSETVDEFFRRNHPDHYLGQQAVYNANRYA KLVKKKERLQNWLDYYQLKFERHPGKRPIGRTGCLGFCGREVDQIDYYRARISELDKKLA SERQRVLNDPKAVMPVAFVTFDSRWGAAVCAQTQQSKNPTQWLTDWAPEPRDVYWQNLAI PFFSLSIRKFLISIAVFALVFFYMIPIAFVQSLANLEGIEKVAPFLRPVIDTPVVKSFLQ GFLPGLALKIFLYILPTVLMIMSKVEGYVSLSSLERRAASKYYYFMLVNVFLGSIIAGTA FEQLNAFFHQPPSQIPRTIGVAIPMKATFFMTYIMVDGWAGIANEILRVKPLVIYHLKNM FIVKTERDRERAMDPGSIGLAENLPSLQLYFLLGLVYAVVTPILLPFIIIFFAFAFLVYR HQIINVYNQEYESAAAFWPQVHSRIIASLLISHVTLFGLMSTMKAAYSTPLLIFLPLLTI WFHKYCKSRFEPAFRKYPLEEAMEKDNLERTSEPNLNLKSYLQNAYLHPIFHMFEQQQQQ EQEQQREEKVEVRIDKAQQHHHRQVEEEEEESKSSQATTHYYHHHHEQTTTTTHHHYHQH EHMSHYHMGPSDTADSPSPPHFVYHYGVDP

Transcript Sequence

Transcript ID	Os10t0579100-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:10:23088168:23093415:-1 gene:Os10g0579100 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:HYPEROSMOLALITY-GATED CALCIUM-PERMEABLE CHANNEL 1.4 description:Protein of unknown function DUF221 domain containing protein. (Os10t0579100-01)
Sequence	TAGTAGGCTGTAGCTGGCCTGCACTGCACGCCTGGAGTCGTGCAGCCAGAAAGGCAAGGC TGCACACTTGCTGCCGCTCTCGCCTCCCCATACTCAGTACAGTAGCTAGGAAGAAGGCAA GGGAAGGGCATGGCGACGCTGCCGGACCTGGGTGTGTCCGCCTTCATCAACATCTTGGGC GCCTTCGTCTTCCTCCTCATCTTCGCCGCCCTCCGCCTCCAGCCCATCAACGACCGCGTC TACTTCCCCAAGCTCTACCTCACTGGCCAGCGACGCCACCACCCTCACCCTCATGGCTTC GTCAACCTCGACCTCTGCTCCTACCTCCGCTTCCTCGCCTGGGTCCCCGGCGCCCTCCGC ATGTCCCAGCCCGACCTCATCCACCACGCCGGCCTCGACTCCGCCGTCTACCTCCGAATC TACACGCTCGGCCTCAAGATATTTTTGCCCATCATGACTGTCGCCTTGCTGGTTCTTATT CCAGTTAATGTCTCTGGTGGCACGTTACTTAATTTACGAAAAGAAATTGTCTTTAGTGAT ATTGATAAGCTTTCCATATCAAATGTCAACCCTGGATCCAACAGGTTCTTTATCCATCTA TTAATGGCATATGTGTTCACTTTTTGGACTTGCTTTATGCTATACAAAGAGTATAGCAAT GTGGCATTTATGAGATTGCACTTCCTGGCTTCTCAGAAGCGTTGTGCTGATCAGTTCACT GTGATTGTTAGAAACATACCTCATGTTTCAAGCCATTCAACATCTGAAACAGTGGATGAA TTCTTCCGTAGGAATCATCCAGACCACTATCTTGGTCAGCAGGCTGTTTATAACGCAAAC AGGTATGCTAAACTTGTGAAGAAAAAAGAGAGGCTTCAAAACTGGTTGGATTACTACCAG CTGAAGTTTGAAAGGCATCCTGGAAAAAGACCAATTGGAAGGACAGGGTGCCTTGGTTTC TGCGGTAGAGAAGTGGATCAAATCGACTATTACCGTGCTAGAATCAGCGAGCTTGATAAG AAGCTTGCATCTGAGCGTCAAAGAGTTCTCAATGACCCAAAAGCTGTTATGCCAGTTGCT TTTGTGACATTTGACTCGAGATGGGGAGCTGCTGTATGTGCACAGACACAACAGTCAAAG AATCCTACCCAATGGCTAACTGATTGGGCTCCTGAACCGCGGGATGTATATTGGCAGAAT CTTGCCATTCCATTTTTCTCTCTCAGTATCCGCAAGTTCCTGATATCCATTGCAGTTTTT GCTCTGGTGTTCTTCTACATGATACCTATAGCTTTTGTGCAATCACTTGCCAATCTTGAG GGTATTGAAAAAGTTGCACCTTTCCTAAGGCCTGTGATAGACACACCAGTGGTGAAATCC TTCCTGCAGGGTTTCCTTCCGGGTTTGGCTTTGAAGATTTTTCTGTATATCCTCCCAACG GTTTTGATGATTATGTCAAAGGTTGAAGGTTATGTGTCTTTATCATCTCTGGAAAGGAGG GCTGCTTCAAAATATTACTACTTCATGCTGGTGAATGTATTTCTTGGAAGCATAATCGCT GGCACAGCTTTTGAACAGCTAAATGCATTTTTCCATCAGCCACCTTCACAAATACCAAGG ACCATTGGAGTAGCTATACCAATGAAAGCTACATTTTTTATGACATACATAATGGTTGAC GGGTGGGCTGGCATCGCGAACGAGATTCTTCGAGTGAAGCCGCTGGTGATATACCACCTG AAGAACATGTTTATTGTGAAGACGGAGCGGGACAGGGAGAGGGCAATGGATCCGGGCAGC ATTGGGCTTGCAGAGAACCTCCCATCACTGCAGCTGTATTTTCTTCTTGGGCTTGTGTAT GCTGTGGTCACCCCCATTCTCCTCCCTTTCATTATCATCTTCTTTGCCTTCGCTTTCCTC GTGTACAGACACCAGATCATCAACGTGTACAACCAAGAATACGAGAGTGCTGCTGCGTTT TGGCCTCAGGTGCACTCTCGCATAATAGCGAGCTTGCTGATCTCGCATGTAACTCTGTTT GGGCTGATGAGCACCATGAAGGCTGCCTACTCCACCCCGCTGCTTATCTTTCTGCCACTC CTCACCATATGGTTCCACAAGTACTGCAAGAGCCGTTTCGAGCCTGCTTTCCGCAAGTAC CCTCTAGAGGAAGCGATGGAGAAGGACAATCTGGAGCGCACGTCGGAGCCAAACCTGAAC CTCAAATCGTACCTGCAGAACGCTTACCTGCACCCCATTTTCCACATGTTTGAGCAGCAG CAGCAGCAGGAGCAGGAGCAGCAACGGGAGGAGAAGGTAGAGGTGCGAATCGACAAGGCG CAGCAACATCATCATCGGCAGGTAGAGGAGGAAGAGGAGGAGAGCAAGAGCAGCCAGGCT ACAACACACTACTACCACCATCACCATGAGCAGACCACAACGACGACACACCACCATTAC CATCAGCATGAGCATATGAGCCACTACCACATGGGCCCCTCCGACACAGCTGACTCACCC TCGCCGCCGCACTTTGTCTACCATTATGGCGTCGACCCTTGATAATCGCCCAGATAGTCT CTTAGCTTCTGAATCACTAGATTGTTTGTTCTTTTGTTTTTTCCTTTTGTCAATTGGGGG TGATATTTTTATTCCTCTAATTAACGACCGACTGGCTGCTGATAATTATTTAATGATCTG TTGTAAATGCG