Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os10t0578200-01
CDS Infomation	cds chromosome:IRGSP-1.0:10:23062454:23066292:1 gene:Os10g0578200 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:CELLULOSE SYNTHASE LIKE D1 description:Glycosyltransferase family 2 (GT2) protein, Root hair morphogenesis (Os10t0578200-01)
Sequence	ATGGCGTCGAAGGGCATCCTCAAGAACGGCGGTAAGCCGCCGACGGCGCCATCGTCGGCG GCGCCCACGGTGGTGTTCGGTCGGCGGACGGACTCGGGGCGATTCATCAGCTACTCCCGC GACGACCTTGACTCGGAGATCAGCAGCGTGGACTTCCAGGACTACCACGTCCACATCCCC ATGACGCCGGACAACCAGCCCATGGACCCTGCCGCCGGCGACGAGCAGCAGTACGTGTCC AGCTCGCTCTTCACCGGCGGGTTCAACAGCGTGACACGCGCGCACGTGATGGAGAAGCAG GCGTCGTCGGCGAGGGCGACGGTGTCGGCGTGCATGGTGCAGGGGTGCGGGTCCAAGATC ATGCGCAACGGGCGCGGCGCCGACATCCTCCCCTGCGAGTGCGACTTCAAGATCTGCGTG GACTGCTTCACCGACGCCGTCAAGGGCGGCGGCGGCGTGTGCCCGGGGTGCAAGGAGCCG TACAAGCACGCGGAGTGGGAGGAGGTGGTGTCGGCGTCCAACCACGACGCCATCAACAGG GCGCTGTCGCTGCCGCACGGGCACGGGCATGGCCCCAAGATGGAGAGGCGGCTGTCGCTG GTGAAGCAGAACGGGGGGGCGCCCGGCGAGTTCGACCACAACCGCTGGCTCTTCGAGACC AAGGGCACCTACGGCTACGGCAACGCAATCTGGCCCGAGGACGACGGCGTGGCGGGGCAC CCCAAGGAGCTGATGAGCAAGCCATGGCGGCCGCTGACCCGCAAGCTCCGGATCCAGGCG GCGGTGATCAGCCCGTACAGGCTGCTGGTCCTGATCCGGCTGGTGGCGCTGGGGTTGTTC CTGATGTGGCGCATCAAGCACCAGAACGAGGACGCCATCTGGCTGTGGGGGATGTCCATC GTGTGCGAGCTGTGGTTCGCCTTGTCGTGGGTGCTGGACCAGCTGCCCAAGCTGTGCCCC ATCAACCGCGCCACCGACCTGAGCGTGCTCAAGGACAAGTTCGAGACGCCCACGCCGAGC AACCCCACCGGCAAGTCCGACCTCCCCGGGATCGACATCTTCGTCTCCACCGCCGACCCG GAGAAGGAGCCCGTGCTGGTGACGGCCAACACCATCCTCTCCATCCTGGCCGCCGACTAC CCCGTCGACAAGTTGGCGTGCTACGTGTCCGACGACGGCGGGGCGCTGCTGACGTTCGAG GCCATGGCGGAGGCGGCGAGCTTCGCCAACCTGTGGGTGCCATTCTGCCGGAAGCACGAG ATCGAGCCGAGGAACCCCGACAGCTACTTCAACCTCAAGAGGGACCCGTTCAAGAACAAG GTGAAGGGCGACTTCGTCAAGGACAGGCGGCGGGTGAAGCGGGAGTACGACGAGTTCAAG GTCCGCGTCAATGGCCTCCCCGACGCCATCCGCCGCCGCTCCGACGCGTACCACGCCCGC GAGGAGATCCAGGCCATGAACCTGCAGCGGGAGAAGATGAAGGCCGGCGGCGACGAGCAG CAGCTGGAGCCGATAAAGATCCCCAAGGCGACGTGGATGGCGGACGGCACGCACTGGCCG GGGACGTGGCTGCAGGCGTCGCCGGAGCACGCGAGGGGCGACCACGCGGGGATCATACAG GTGATGCTAAAGCCTCCCAGTCCCAGTCCCAGCAGCAGCGGCGGCGACATGGAAAAGAGG GTGGATTTGTCGGGCGTGGACACCCGGCTGCCGATGCTGGTGTACGTGTCGCGGGAGAAG CGGCCGGGGTACGACCACAACAAGAAGGCGGGCGCCATGAACGCGCTGGTGCGGGCGTCG GCGATCATGTCCAACGGGCCGTTCATCCTCAACCTGGACTGCGACCACTACGTGTACAAC TCCAAGGCGTTCCGGGAGGGGATGTGCTTCATGATGGACCGCGGCGGCGACCGCCTCTGC TACGTCCAGTTCCCGCAGCGCTTCGAGGGCATCGACCCCTCCGACCGCTACGCCAACCAC AACACCGTCTTCTTCGACGTCAACATGCGCGCCCTCGATGGCCTCCAGGGCCCCGTCTAT GTCGGAACTGGCTGCCTCTTCCGCCGCATCGCGCTCTACGGCTTCGACCCGCCCAGGTCC AAGGACCACACCACCCCGTGGTCCTGCTGCCTGCCACGTCGCCGCCGAACAAGATCCCAG CCCCAGCCCCAGGAGGAGGAGGAGGAGACGATGGCCCTCCGCATGGACATGGACGGCGCG ATGAACATGGCGAGCTTCCCCAAGAAGTTCGGCAACTCGAGCTTCCTGATCGACTCCATC CCGGTGGCGGAGTTCCAGGGACGGCCGCTGGCGGACCACCCGTCGGTGAAGAACGGGCGG CCGCCGGGGGCGCTGACGATCCCGCGGGAGACGCTGGACGCGTCGATCGTGGCGGAGGCG ATCAGCGTGGTGTCGTGCTGGTACGAGGAGAAGACGGAGTGGGGGACGAGGGTGGGTTGG ATATACGGGTCGGTGACGGAGGACGTGGTCACCGGCTACCGCATGCACAACCGGGGGTGG AAGTCCGTCTACTGCGTCACCCACCGCGACGCCTTCCGCGGCACCGCCCCCATCAACCTC ACCGACCGCCTCCACCAGGTCCTCCGATGGGCCACTGGCTCCGTCGAGATCTTCTTCTCA CGCAACAACGCACTCTTCGCTTCCTCAAAGATGAAGGTTCTCCAGCGCATCGCTTACCTC AACGTTGGCATCTACCCCTTCACCTCCGTCTTCCTCATCGTCTACTGCTTCCTCCCGGCG CTCTCCCTCTTCTCGGGGCAGTTCATCGTGCAGACGCTCAACGTCACCTTCCTCACCTAC CTGCTCATCATCACCATCACGCTCTGCCTCCTGGCCATGCTGGAGATCAAGTGGTCCGGC ATCGCGCTGGAGGAGTGGTGGCGGAACGAGCAGTTCTGGCTCATCGGCGGAACCAGCGCC CACCTCGCCGCCGTCCTGCAGGGCCTTCTCAAGGTCATCGCCGGCATCGAGATCTCCTTC ACCCTCACCTCCAAGCAGCTCGGCGACGACGTCGACGACGAGTTCGCCGAGCTCTACGCG GTCAAGTGGACGTCCCTCATGATACCGCCGCTCACCATCATAATGATCAACCTCGTCGCC ATCGCCGTCGGCTTCAGCCGCACCATCTACAGCACCATCCCGCAGTGGAGCAAGCTTCTC GGTGGAGTCTTCTTCAGCTTCTGGGTCCTCGCGCATCTCTACCCCTTCGCCAAGGGCCTC ATGGGCAGGAGGGGAAGGACACCCACCATCGTCTACGTCTGGTCTGGCCTCGTCGCCATC ACCATCTCCTTGCTCTGGATTGCAATCAAGCCTCCTTCTGCACAAGCCAACTCACAGCTA GGAGGATCCTTCTCTTTCCCCTGA

Peptide Sequence

PEP ID	Os10t0578200-01
PEP Infomation	pep chromosome:IRGSP-1.0:10:23062454:23066292:1 gene:Os10g0578200 transcript:Os10t0578200-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:CELLULOSE SYNTHASE LIKE D1 description:Glycosyltransferase family 2 (GT2) protein, Root hair morphogenesis (Os10t0578200-01)
Sequence	MASKGILKNGGKPPTAPSSAAPTVVFGRRTDSGRFISYSRDDLDSEISSVDFQDYHVHIP MTPDNQPMDPAAGDEQQYVSSSLFTGGFNSVTRAHVMEKQASSARATVSACMVQGCGSKI MRNGRGADILPCECDFKICVDCFTDAVKGGGGVCPGCKEPYKHAEWEEVVSASNHDAINR ALSLPHGHGHGPKMERRLSLVKQNGGAPGEFDHNRWLFETKGTYGYGNAIWPEDDGVAGH PKELMSKPWRPLTRKLRIQAAVISPYRLLVLIRLVALGLFLMWRIKHQNEDAIWLWGMSI VCELWFALSWVLDQLPKLCPINRATDLSVLKDKFETPTPSNPTGKSDLPGIDIFVSTADP EKEPVLVTANTILSILAADYPVDKLACYVSDDGGALLTFEAMAEAASFANLWVPFCRKHE IEPRNPDSYFNLKRDPFKNKVKGDFVKDRRRVKREYDEFKVRVNGLPDAIRRRSDAYHAR EEIQAMNLQREKMKAGGDEQQLEPIKIPKATWMADGTHWPGTWLQASPEHARGDHAGIIQ VMLKPPSPSPSSSGGDMEKRVDLSGVDTRLPMLVYVSREKRPGYDHNKKAGAMNALVRAS AIMSNGPFILNLDCDHYVYNSKAFREGMCFMMDRGGDRLCYVQFPQRFEGIDPSDRYANH NTVFFDVNMRALDGLQGPVYVGTGCLFRRIALYGFDPPRSKDHTTPWSCCLPRRRRTRSQ PQPQEEEEETMALRMDMDGAMNMASFPKKFGNSSFLIDSIPVAEFQGRPLADHPSVKNGR PPGALTIPRETLDASIVAEAISVVSCWYEEKTEWGTRVGWIYGSVTEDVVTGYRMHNRGW KSVYCVTHRDAFRGTAPINLTDRLHQVLRWATGSVEIFFSRNNALFASSKMKVLQRIAYL NVGIYPFTSVFLIVYCFLPALSLFSGQFIVQTLNVTFLTYLLIITITLCLLAMLEIKWSG IALEEWWRNEQFWLIGGTSAHLAAVLQGLLKVIAGIEISFTLTSKQLGDDVDDEFAELYA VKWTSLMIPPLTIIMINLVAIAVGFSRTIYSTIPQWSKLLGGVFFSFWVLAHLYPFAKGL MGRRGRTPTIVYVWSGLVAITISLLWIAIKPPSAQANSQLGGSFSFP

Transcript Sequence

Transcript ID	Os10t0578200-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:10:23062454:23066292:1 gene:Os10g0578200 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:CELLULOSE SYNTHASE LIKE D1 description:Glycosyltransferase family 2 (GT2) protein, Root hair morphogenesis (Os10t0578200-01)
Sequence	ATGGCGTCGAAGGGCATCCTCAAGAACGGCGGTAAGCCGCCGACGGCGCCATCGTCGGCG GCGCCCACGGTGGTGTTCGGTCGGCGGACGGACTCGGGGCGATTCATCAGCTACTCCCGC GACGACCTTGACTCGGAGATCAGCAGCGTGGACTTCCAGGACTACCACGTCCACATCCCC ATGACGCCGGACAACCAGCCCATGGACCCTGCCGCCGGCGACGAGCAGCAGTACGTGTCC AGCTCGCTCTTCACCGGCGGGTTCAACAGCGTGACACGCGCGCACGTGATGGAGAAGCAG GCGTCGTCGGCGAGGGCGACGGTGTCGGCGTGCATGGTGCAGGGGTGCGGGTCCAAGATC ATGCGCAACGGGCGCGGCGCCGACATCCTCCCCTGCGAGTGCGACTTCAAGATCTGCGTG GACTGCTTCACCGACGCCGTCAAGGGCGGCGGCGGCGTGTGCCCGGGGTGCAAGGAGCCG TACAAGCACGCGGAGTGGGAGGAGGTGGTGTCGGCGTCCAACCACGACGCCATCAACAGG GCGCTGTCGCTGCCGCACGGGCACGGGCATGGCCCCAAGATGGAGAGGCGGCTGTCGCTG GTGAAGCAGAACGGGGGGGCGCCCGGCGAGTTCGACCACAACCGCTGGCTCTTCGAGACC AAGGGCACCTACGGCTACGGCAACGCAATCTGGCCCGAGGACGACGGCGTGGCGGGGCAC CCCAAGGAGCTGATGAGCAAGCCATGGCGGCCGCTGACCCGCAAGCTCCGGATCCAGGCG GCGGTGATCAGCCCGTACAGGCTGCTGGTCCTGATCCGGCTGGTGGCGCTGGGGTTGTTC CTGATGTGGCGCATCAAGCACCAGAACGAGGACGCCATCTGGCTGTGGGGGATGTCCATC GTGTGCGAGCTGTGGTTCGCCTTGTCGTGGGTGCTGGACCAGCTGCCCAAGCTGTGCCCC ATCAACCGCGCCACCGACCTGAGCGTGCTCAAGGACAAGTTCGAGACGCCCACGCCGAGC AACCCCACCGGCAAGTCCGACCTCCCCGGGATCGACATCTTCGTCTCCACCGCCGACCCG GAGAAGGAGCCCGTGCTGGTGACGGCCAACACCATCCTCTCCATCCTGGCCGCCGACTAC CCCGTCGACAAGTTGGCGTGCTACGTGTCCGACGACGGCGGGGCGCTGCTGACGTTCGAG GCCATGGCGGAGGCGGCGAGCTTCGCCAACCTGTGGGTGCCATTCTGCCGGAAGCACGAG ATCGAGCCGAGGAACCCCGACAGCTACTTCAACCTCAAGAGGGACCCGTTCAAGAACAAG GTGAAGGGCGACTTCGTCAAGGACAGGCGGCGGGTGAAGCGGGAGTACGACGAGTTCAAG GTCCGCGTCAATGGCCTCCCCGACGCCATCCGCCGCCGCTCCGACGCGTACCACGCCCGC GAGGAGATCCAGGCCATGAACCTGCAGCGGGAGAAGATGAAGGCCGGCGGCGACGAGCAG CAGCTGGAGCCGATAAAGATCCCCAAGGCGACGTGGATGGCGGACGGCACGCACTGGCCG GGGACGTGGCTGCAGGCGTCGCCGGAGCACGCGAGGGGCGACCACGCGGGGATCATACAG GTGATGCTAAAGCCTCCCAGTCCCAGTCCCAGCAGCAGCGGCGGCGACATGGAAAAGAGG GTGGATTTGTCGGGCGTGGACACCCGGCTGCCGATGCTGGTGTACGTGTCGCGGGAGAAG CGGCCGGGGTACGACCACAACAAGAAGGCGGGCGCCATGAACGCGCTGGTGCGGGCGTCG GCGATCATGTCCAACGGGCCGTTCATCCTCAACCTGGACTGCGACCACTACGTGTACAAC TCCAAGGCGTTCCGGGAGGGGATGTGCTTCATGATGGACCGCGGCGGCGACCGCCTCTGC TACGTCCAGTTCCCGCAGCGCTTCGAGGGCATCGACCCCTCCGACCGCTACGCCAACCAC AACACCGTCTTCTTCGACGTCAACATGCGCGCCCTCGATGGCCTCCAGGGCCCCGTCTAT GTCGGAACTGGCTGCCTCTTCCGCCGCATCGCGCTCTACGGCTTCGACCCGCCCAGGTCC AAGGACCACACCACCCCGTGGTCCTGCTGCCTGCCACGTCGCCGCCGAACAAGATCCCAG CCCCAGCCCCAGGAGGAGGAGGAGGAGACGATGGCCCTCCGCATGGACATGGACGGCGCG ATGAACATGGCGAGCTTCCCCAAGAAGTTCGGCAACTCGAGCTTCCTGATCGACTCCATC CCGGTGGCGGAGTTCCAGGGACGGCCGCTGGCGGACCACCCGTCGGTGAAGAACGGGCGG CCGCCGGGGGCGCTGACGATCCCGCGGGAGACGCTGGACGCGTCGATCGTGGCGGAGGCG ATCAGCGTGGTGTCGTGCTGGTACGAGGAGAAGACGGAGTGGGGGACGAGGGTGGGTTGG ATATACGGGTCGGTGACGGAGGACGTGGTCACCGGCTACCGCATGCACAACCGGGGGTGG AAGTCCGTCTACTGCGTCACCCACCGCGACGCCTTCCGCGGCACCGCCCCCATCAACCTC ACCGACCGCCTCCACCAGGTCCTCCGATGGGCCACTGGCTCCGTCGAGATCTTCTTCTCA CGCAACAACGCACTCTTCGCTTCCTCAAAGATGAAGGTTCTCCAGCGCATCGCTTACCTC AACGTTGGCATCTACCCCTTCACCTCCGTCTTCCTCATCGTCTACTGCTTCCTCCCGGCG CTCTCCCTCTTCTCGGGGCAGTTCATCGTGCAGACGCTCAACGTCACCTTCCTCACCTAC CTGCTCATCATCACCATCACGCTCTGCCTCCTGGCCATGCTGGAGATCAAGTGGTCCGGC ATCGCGCTGGAGGAGTGGTGGCGGAACGAGCAGTTCTGGCTCATCGGCGGAACCAGCGCC CACCTCGCCGCCGTCCTGCAGGGCCTTCTCAAGGTCATCGCCGGCATCGAGATCTCCTTC ACCCTCACCTCCAAGCAGCTCGGCGACGACGTCGACGACGAGTTCGCCGAGCTCTACGCG GTCAAGTGGACGTCCCTCATGATACCGCCGCTCACCATCATAATGATCAACCTCGTCGCC ATCGCCGTCGGCTTCAGCCGCACCATCTACAGCACCATCCCGCAGTGGAGCAAGCTTCTC GGTGGAGTCTTCTTCAGCTTCTGGGTCCTCGCGCATCTCTACCCCTTCGCCAAGGGCCTC ATGGGCAGGAGGGGAAGGACACCCACCATCGTCTACGTCTGGTCTGGCCTCGTCGCCATC ACCATCTCCTTGCTCTGGATTGCAATCAAGCCTCCTTCTGCACAAGCCAACTCACAGCTA GGAGGATCCTTCTCTTTCCCCTGATATACATATATTCTCATTCCACACACCCAATCCAGA CTACCTGTCTCTCTGCTATCTGCTTGCTTAGGATTCATTCATATGCTAGCTGGTCGATCG AGCTACCGCAGCCTAGGGAACATGATCATATCACCCACAGTCTGTTTGCTTCATGGAGCA AACTGCACTTCACCCCAGTCCAGATCTGCTTCTTCACAGTGAGTGAGATCACTATTTTTG CTTGTTTGTGATTTTTTTTTCTAAAATTGTTTAGAGCTCATTGTCATTTGAATGGCATTC CTAGAAAAGGGAGAAAGAAAAGACACTTGACATCAACACAGGTGTAATACATTGTTACTA GAGAATCGGCAATATAATGTTACTAGAGTATC