Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os10t0577900-01
CDS Infomation	cds chromosome:IRGSP-1.0:10:23044693:23050709:1 gene:Os10g0577900 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:glycerol-3-phosphate acyltransferase description:Similar to Glycerol-3-phosphate acyltransferase (Fragment). (Os10t0577900-01)
Sequence	ATGCAGGCGCCGCCGCTCGCCTCCTCGCCGTCGCCGGCGTGGACCGCCATCCTGCCCGCG CCGGCGAGGCTCTGCTGCTCCCGCCGCGGCGCCCTCCGCCTCGAAGCCAAGGCCGCCTGG AGGCCGGCGGCCCGAGGGCCGCGGGTGCCGGCCAAGGGCGCCGTCCTCGCCTCCGAGGTG GTGGGCCCCTCTCCCCTCCTCGACGCGCGCAACGAGCAAGAGCTCATTTTGCATATCAGA AAGGAAGTGGAGAAAGGGAAGCTGCCTGCAGATGTCGCTGCCAATCTAGAAGAGCTATAC TACAACTACAAGGACGCGGTTATGCAGAGCAGGGATCCAAATGCACACGACATCGTGCTT TCAAACATGGTGGCCCTGTTCGATTGTGTTCTGCTCGATGTAGAGAATCCGTTTACCTTT CCGCCTTATCACAAAGCTGTCAGGGAACCATTCGACTATTACATGTTTGGTCAGAACTAC ATTAGGCCCCTTGTAGACTATAGAAATTCATATGTTGGTAATATATCCATTTTCCAAGAC ATGGAACAGAAGCTCCAACAGGGCCATAATGTTGTTCTGATGTCTAACCATCAGACAGAA GCAGATCCAGCAATCATTGCTTTGCTGCTTGAAAGAAGCAACCCATGGATCAGCGAAAAC ATAGTTTATGTTGCTGGTGATAGGGTTGTTACAGATCCTCTCTGCAAGCCATTTAGTATG GGAAGAAACCTCATTTGTGTGTACTCAAAAAAGCATATGAATGATTTTCCTGAGCTAGTT GATATGAAGAGGAGGGCAAATACTCGTAGTCTGAAGGAAATGGCTTTACTTTTACGTGGC GGTTCACAGATAATTTGGATAGCACCAAGTGGTGGTAGAGATCGTCCGGATCCTTTGACA GGAGAATGGCATCCGGCACCATTTGATGCATCTGCAGTGGACAACATGAGGAGGCTTCTG GAGCATTCTGGTGTTCCTGGGCACATATATCCACTCTCACTGCTCTGCTATGAGGTTATG CCTCCACCACAGAAGGTTGAGAAAGAGATTGGTGAGCAAAGGGTTATATCCTTCCATGGT GTAGGCTTGTCAGTAACTGAAGAGATAAAGTACAGCGACATTACGGTTCATACCCAAAAT GTCGACGAGTGCAGAGAGAAATTCTCAGAGTCATTGTACAACTCAGTCGTTGATCAGTAT AATGCGCTCAAATCTGCTATCTTTAGAGGTCGAGGAGCAGATTCATCGGACAGTGCCATC TCACTCTCACAACCATGGCGATGA

Peptide Sequence

PEP ID	Os10t0577900-01
PEP Infomation	pep chromosome:IRGSP-1.0:10:23044693:23050709:1 gene:Os10g0577900 transcript:Os10t0577900-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:glycerol-3-phosphate acyltransferase description:Similar to Glycerol-3-phosphate acyltransferase (Fragment). (Os10t0577900-01)
Sequence	MQAPPLASSPSPAWTAILPAPARLCCSRRGALRLEAKAAWRPAARGPRVPAKGAVLASEV VGPSPLLDARNEQELILHIRKEVEKGKLPADVAANLEELYYNYKDAVMQSRDPNAHDIVL SNMVALFDCVLLDVENPFTFPPYHKAVREPFDYYMFGQNYIRPLVDYRNSYVGNISIFQD MEQKLQQGHNVVLMSNHQTEADPAIIALLLERSNPWISENIVYVAGDRVVTDPLCKPFSM GRNLICVYSKKHMNDFPELVDMKRRANTRSLKEMALLLRGGSQIIWIAPSGGRDRPDPLT GEWHPAPFDASAVDNMRRLLEHSGVPGHIYPLSLLCYEVMPPPQKVEKEIGEQRVISFHG VGLSVTEEIKYSDITVHTQNVDECREKFSESLYNSVVDQYNALKSAIFRGRGADSSDSAI SLSQPWR

Transcript Sequence

Transcript ID	Os10t0577900-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:10:23044693:23050709:1 gene:Os10g0577900 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:glycerol-3-phosphate acyltransferase description:Similar to Glycerol-3-phosphate acyltransferase (Fragment). (Os10t0577900-01)
Sequence	GGGCTGGAGATGGAGATGGAGATGGAGATGGAGGGTGGGTTTGGCACAAATCCCGAAGCG CTCCGGCGACCACTCCCAACCCAGTCCCCACTAGGGTAACAACCCCCTTTCGGATTAGGT TTCTAGAAGCTTCTTCTATGCAGGCGCCGCCGCTCGCCTCCTCGCCGTCGCCGGCGTGGA CCGCCATCCTGCCCGCGCCGGCGAGGCTCTGCTGCTCCCGCCGCGGCGCCCTCCGCCTCG AAGCCAAGGCCGCCTGGAGGCCGGCGGCCCGAGGGCCGCGGGTGCCGGCCAAGGGCGCCG TCCTCGCCTCCGAGGTGGTGGGCCCCTCTCCCCTCCTCGACGCGCGCAACGAGCAAGAGC TCATTTTGCATATCAGAAAGGAAGTGGAGAAAGGGAAGCTGCCTGCAGATGTCGCTGCCA ATCTAGAAGAGCTATACTACAACTACAAGGACGCGGTTATGCAGAGCAGGGATCCAAATG CACACGACATCGTGCTTTCAAACATGGTGGCCCTGTTCGATTGTGTTCTGCTCGATGTAG AGAATCCGTTTACCTTTCCGCCTTATCACAAAGCTGTCAGGGAACCATTCGACTATTACA TGTTTGGTCAGAACTACATTAGGCCCCTTGTAGACTATAGAAATTCATATGTTGGTAATA TATCCATTTTCCAAGACATGGAACAGAAGCTCCAACAGGGCCATAATGTTGTTCTGATGT CTAACCATCAGACAGAAGCAGATCCAGCAATCATTGCTTTGCTGCTTGAAAGAAGCAACC CATGGATCAGCGAAAACATAGTTTATGTTGCTGGTGATAGGGTTGTTACAGATCCTCTCT GCAAGCCATTTAGTATGGGAAGAAACCTCATTTGTGTGTACTCAAAAAAGCATATGAATG ATTTTCCTGAGCTAGTTGATATGAAGAGGAGGGCAAATACTCGTAGTCTGAAGGAAATGG CTTTACTTTTACGTGGCGGTTCACAGATAATTTGGATAGCACCAAGTGGTGGTAGAGATC GTCCGGATCCTTTGACAGGAGAATGGCATCCGGCACCATTTGATGCATCTGCAGTGGACA ACATGAGGAGGCTTCTGGAGCATTCTGGTGTTCCTGGGCACATATATCCACTCTCACTGC TCTGCTATGAGGTTATGCCTCCACCACAGAAGGTTGAGAAAGAGATTGGTGAGCAAAGGG TTATATCCTTCCATGGTGTAGGCTTGTCAGTAACTGAAGAGATAAAGTACAGCGACATTA CGGTTCATACCCAAAATGTCGACGAGTGCAGAGAGAAATTCTCAGAGTCATTGTACAACT CAGTCGTTGATCAGTATAATGCGCTCAAATCTGCTATCTTTAGAGGTCGAGGAGCAGATT CATCGGACAGTGCCATCTCACTCTCACAACCATGGCGATGAAACTCCGCTTTCTCAGTTT TGTTCTGTCTGGATTTCTCAATGAAGTTACCTTCATTTCTTTTCGACACAGCAGATGAAC TGCTGCCGACATTGCAATTTTTCCTGGCAGAACCTTTTAAACTTCGGTATCCTAACCCAT ACTAATCATGAAGGGGAGGCTGTTACTGTCATGCAAATCTTGCCTAGTATGATGATTTTA CCCAGCTGAATCCCAGCCACACATGATGCGTTCGTTCATTGTTTGCACACAAATATTATT GCGTCATATGAGTATTCTTTGGGTCAGAACTGCACAGCAACGCGGCCTGGGCACTCAATC TGGCATGTTGTCTATGGGGTGCATGCTTGTTAACAGAAGAAGCCCAACATGTGGGATTTT GTTTTTTGCGGTTAATTTTTTTCCTGTTTTCCTTTTGTTCCATGTATATATATTCGATTT TGATCTCCAGGTTTGGAGATACAATGGTCAAAGTGTTATGATAGTCTCTTAGTTTGTTGC CTCGAAGTTATACTCGGGCGCAACATGTCTGACTGATATTCTGATGATGTTACTCGTTTC TGAACTTCCTGACGCCAATATGGTGCTTGGATGTTG