Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os10t0577800-01
CDS Infomation	cds chromosome:IRGSP-1.0:10:23035367:23039711:-1 gene:Os10g0577800 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:SRO protein 1a, SIMILAR to RCD1 a description:Poly(ADP-ribose) polymerase, catalytic region domain containing protein. (Os10t0577800-01);Similar to Poly polymerase catalytic domain containing protein, expressed. (Os10t0577800-02)
Sequence	ATGGCTGCGATGAACGAAAAGGTATTGGATAAATGTGGAAGAAACATAAGTAGCCTCAAG AGAAAGCGGGACAACCCAGCTGCACGTTGCGCTGATGCCGGCAACACCTCTAAATTGCAT AAGCATCCCGCCGATAACTCTGTTGTTAGGTTTTATGTTGATGAAGGTCACAAGGCAAAG ATCAAGTGCCATTTCAAAATGCAGATTATACAGAGTTATCAGAATTTCATGACTAGTGCT TTACCTAAGCGAATTCTGCTTCGTCAAGGTGGTGAATGGAAAGACTTTCCAAAGCAAATT GTCAAGCTTGCCCACAGTGATTTTAGGACTAAGAAGACAATCACAGAAGGTGAACACCAG ACCCATCTTTTTTTGCTGGATTTTGTGCACATGACATTCATAGACTCAAAGACAGGCCTT CAGAGGCCAATAGCTTGGATTGATGAGAATGGGAAGCAGTACTTCCCAGAATTTTTTATT GAAGATAAGACACTGTATAGGAAAAAGGAATTGGGAAATGGTAATAATGTATACATAATT GTCGAGCCCAATGGGACACAAGAAATGAACGACCACTTTGGAACATCAGAAAGTTCAGCA GAAAGCTCGAATTTTGAATCTAGCACTGATGATGTTTCCAGCCCTAAGAGAGCCAAGGCT GAGAGGAGTGTCGCAGGAAACAAAACTGGTGGTGTCAAAGAAACTATTGGAGAGAATGAG CCACACGCCTTGCTGCCTATTCCCTGCAGATCTCTACCACAAGATAAGCTGGGTGACCAT TCACGTGTTCAACTAGCTATTTCTGCTGTTCAGAAATTGTTGCTGCAGGGTCTGGGCACT GTTCTTGGTTCCAAGGACATCGTTGGGATCTACAGAACACCAGCAGTAGATAACCATAAA GAATTTCGTTATAATCTTTTCAAAAAGCAGGCAGAGCATACTAAATGTAAGCGTGGCAAT GCAAATGTCCGCTATGCCTGGCTTGCTTGCTCAAAAGATGCTGTGGATGAAATGATGTTG AATGGTGTCATGCACTTTGAGAAGACTGTTAAGTGCCCAGACTACGGAATTGGCACAATC CTTGCTCCAGCAAATTGCTCCAATACCTGTGTGAATTACTCTGATGTTGATGAAAATGGC ATTGTCCATATGATGTTGTGCCGTGTTGTAATGGGGAACGTAGAAATAGTTCACCATGGA TCTAAGCAGCATCGGCCTAGTAACGAGTATTTCGATAGTGGTGTAGATGACATTAAAAAC CCTCAACATTACATTGTGTGGGATATGAATGTGAATAGTCACATCTATTCTGAATTTGTA GTCACCATCAAATTGCCTTCTAGAGTCAAAGATTCTCCTGCCACCGAAGAAGATTGTCAC AATTTATCAGAGGTTTCATCACTGATCTTGAGCTCTGGTTCGCCTGATAGTGTATCACAG GACATGAACCTTCAGGCTTCTCCAGCATTGGGAGGTCATTATGAAGCCCCCATGTTAGGA GATAAAGTGGAAAGGGCTCCAAGCACGCCTTGGATGCCTTTCTCCATGTTATTTGCAGCG ATTTCAACCAAAGTTTCTGCTGAGAATATGGACATGGTCAACAGTTGTTACGAAGAATTC AAGAGCAAGAAAATAAGCCGAGTCGACCTAGTGAAGAAGTTAAGGCATATAGTTGGTGAC AGAATGCTTATATCAACAATAATGCGACTCCAAGATAAGTTGCCCCCTATGTCGAGGCAT GAAGCACCCAAACACGTGGGCCAAGATGATGGCTAA

Peptide Sequence

PEP ID	Os10t0577800-01
PEP Infomation	pep chromosome:IRGSP-1.0:10:23035367:23039711:-1 gene:Os10g0577800 transcript:Os10t0577800-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:SRO protein 1a, SIMILAR to RCD1 a description:Poly(ADP-ribose) polymerase, catalytic region domain containing protein. (Os10t0577800-01);Similar to Poly polymerase catalytic domain containing protein, expressed. (Os10t0577800-02)
Sequence	MAAMNEKVLDKCGRNISSLKRKRDNPAARCADAGNTSKLHKHPADNSVVRFYVDEGHKAK IKCHFKMQIIQSYQNFMTSALPKRILLRQGGEWKDFPKQIVKLAHSDFRTKKTITEGEHQ THLFLLDFVHMTFIDSKTGLQRPIAWIDENGKQYFPEFFIEDKTLYRKKELGNGNNVYII VEPNGTQEMNDHFGTSESSAESSNFESSTDDVSSPKRAKAERSVAGNKTGGVKETIGENE PHALLPIPCRSLPQDKLGDHSRVQLAISAVQKLLLQGLGTVLGSKDIVGIYRTPAVDNHK EFRYNLFKKQAEHTKCKRGNANVRYAWLACSKDAVDEMMLNGVMHFEKTVKCPDYGIGTI LAPANCSNTCVNYSDVDENGIVHMMLCRVVMGNVEIVHHGSKQHRPSNEYFDSGVDDIKN PQHYIVWDMNVNSHIYSEFVVTIKLPSRVKDSPATEEDCHNLSEVSSLILSSGSPDSVSQ DMNLQASPALGGHYEAPMLGDKVERAPSTPWMPFSMLFAAISTKVSAENMDMVNSCYEEF KSKKISRVDLVKKLRHIVGDRMLISTIMRLQDKLPPMSRHEAPKHVGQDDG

Transcript Sequence

Transcript ID	Os10t0577800-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:10:23035367:23039711:-1 gene:Os10g0577800 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:SRO protein 1a, SIMILAR to RCD1 a description:Poly(ADP-ribose) polymerase, catalytic region domain containing protein. (Os10t0577800-01);Similar to Poly polymerase catalytic domain containing protein, expressed. (Os10t0577800-02)
Sequence	GTGGACCTCGCGGCCCAATAATTCCACCGCCGCACGCCTCTCTCCCTTCCTCCCCTCCTT CCTTCCTCCCCGCCTCCCGCTCGTTGCCTTCGCCGCCGCCTCACGCCGCCGTGATTTGAG TTAGGTTTTTTTTTTTTTTTGCTCTGACCAGACTTGCCGGCGAAGGAACCACCGGCGGGC ACCGCCTCTCCTCGGCAATCGTTGCCGGGGATAAAGTGGGGTCGTTAAGGGAGCGGTAGG TTTGGGGGTTTGGGATTATAGATCGAGGAAGATGAAGCAATCCATATCGTCTATCATCTT TGTATCTACTCACGCTGCTGCTGCTAACTATAGGATCATTTCGCTTCTGCCTCTTTCTGA CCCGACTCTTTTTGGTTTTTGCCTCGTCGATAATGAACTTGAGTACACTCAGAAGCTTGC CTATTAGCTTAGTGTAAATAGTAGGCTTGTTGGAGTTTAGTTTGTTAGAAATTATTAGTC TCTGGTTCATTTCAGCTAGCAACCATGGCTGCGATGAACGAAAAGGTATTGGATAAATGT GGAAGAAACATAAGTAGCCTCAAGAGAAAGCGGGACAACCCAGCTGCACGTTGCGCTGAT GCCGGCAACACCTCTAAATTGCATAAGCATCCCGCCGATAACTCTGTTGTTAGGTTTTAT GTTGATGAAGGTCACAAGGCAAAGATCAAGTGCCATTTCAAAATGCAGATTATACAGAGT TATCAGAATTTCATGACTAGTGCTTTACCTAAGCGAATTCTGCTTCGTCAAGGTGGTGAA TGGAAAGACTTTCCAAAGCAAATTGTCAAGCTTGCCCACAGTGATTTTAGGACTAAGAAG ACAATCACAGAAGGTGAACACCAGACCCATCTTTTTTTGCTGGATTTTGTGCACATGACA TTCATAGACTCAAAGACAGGCCTTCAGAGGCCAATAGCTTGGATTGATGAGAATGGGAAG CAGTACTTCCCAGAATTTTTTATTGAAGATAAGACACTGTATAGGAAAAAGGAATTGGGA AATGGTAATAATGTATACATAATTGTCGAGCCCAATGGGACACAAGAAATGAACGACCAC TTTGGAACATCAGAAAGTTCAGCAGAAAGCTCGAATTTTGAATCTAGCACTGATGATGTT TCCAGCCCTAAGAGAGCCAAGGCTGAGAGGAGTGTCGCAGGAAACAAAACTGGTGGTGTC AAAGAAACTATTGGAGAGAATGAGCCACACGCCTTGCTGCCTATTCCCTGCAGATCTCTA CCACAAGATAAGCTGGGTGACCATTCACGTGTTCAACTAGCTATTTCTGCTGTTCAGAAA TTGTTGCTGCAGGGTCTGGGCACTGTTCTTGGTTCCAAGGACATCGTTGGGATCTACAGA ACACCAGCAGTAGATAACCATAAAGAATTTCGTTATAATCTTTTCAAAAAGCAGGCAGAG CATACTAAATGTAAGCGTGGCAATGCAAATGTCCGCTATGCCTGGCTTGCTTGCTCAAAA GATGCTGTGGATGAAATGATGTTGAATGGTGTCATGCACTTTGAGAAGACTGTTAAGTGC CCAGACTACGGAATTGGCACAATCCTTGCTCCAGCAAATTGCTCCAATACCTGTGTGAAT TACTCTGATGTTGATGAAAATGGCATTGTCCATATGATGTTGTGCCGTGTTGTAATGGGG AACGTAGAAATAGTTCACCATGGATCTAAGCAGCATCGGCCTAGTAACGAGTATTTCGAT AGTGGTGTAGATGACATTAAAAACCCTCAACATTACATTGTGTGGGATATGAATGTGAAT AGTCACATCTATTCTGAATTTGTAGTCACCATCAAATTGCCTTCTAGAGTCAAAGATTCT CCTGCCACCGAAGAAGATTGTCACAATTTATCAGAGGTTTCATCACTGATCTTGAGCTCT GGTTCGCCTGATAGTGTATCACAGGACATGAACCTTCAGGCTTCTCCAGCATTGGGAGGT CATTATGAAGCCCCCATGTTAGGAGATAAAGTGGAAAGGGCTCCAAGCACGCCTTGGATG CCTTTCTCCATGTTATTTGCAGCGATTTCAACCAAAGTTTCTGCTGAGAATATGGACATG GTCAACAGTTGTTACGAAGAATTCAAGAGCAAGAAAATAAGCCGAGTCGACCTAGTGAAG AAGTTAAGGCATATAGTTGGTGACAGAATGCTTATATCAACAATAATGCGACTCCAAGAT AAGTTGCCCCCTATGTCGAGGCATGAAGCACCCAAACACGTGGGCCAAGATGATGGCTAA ACCATGAAGTCGTCGGTGCGGATGGTGAGAGAAGCAACTGGCCGACTTGACTAGTGGAGA GAAGCTTATCTCACATAAGTTGTCTGCGTCTGTATATGATGCGGGTTTGTCTTTTCGGTC CTAGGATTCATGTTGTCAAGATTTCTGTCATCGGTTTCCGATGCGAAATGATGATTTCAG CTTTACTCGTGGACCTGAGGTTACACATAAAATTGATAAAAGTTCCTTGTTTACCCTCCT GTTTCTTTTTCTTCTCTTTGCATAAAAACATGTAATGTTATATACATATTGATTAATGTT ATTGTTTCGCC