Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os10t0577600-01
CDS Infomation	cds chromosome:IRGSP-1.0:10:23025815:23031701:1 gene:Os10g0577600 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Jumonji 706 description:H3K9 demethylase, Floral organ development (Os10t0577600-01)
Sequence	ATGCAACAGGTGGAGGGCAGGAACTGTCTTCCTGCGGAGGTCAGGATTGGCCTCGAGACG CTCAAGAGGCGCCGGCTTGAGAGGATGCGTTTGACTGCTCAGAACAATGCCGGCGACGGT CCTCCGGTGCCCGCAAGGAGCGGTGGGGATGCGCTAAGGACTCCCGCAAACTGCGGGGTC AGGTTGCATGCTAACAATGGCACAGCTCTACCTAGCAGAACCACCCAGAACAAGGACCCT TTTGCAAAGCGCAGGGTGGACAAGTTTGATATGTCTAGCCTAGAATGGATTGACAAGATC GAAGAATGCCCTGTGTACTATCCTACCAAGGAGGAGTTCGAGGATCCCATTGGTTATATA CAGAAGATTGCACCTGTGGCTTCGAAATACGGAATTTGCAAAATCGTATCTCCAGTAAGC GCTTCTGTTCCTGCTGGTGTCGTGTTGATGAAGGAACAGCCTGGTTTCAAGTTCATGACC AGGGTTCAGCCGCTTCGCCTCGCCAAATGGGCTGAAGATGACACGGTCACTTTCTTCATG AGCGAAAGAAAGTACACTTTCCGGGATTATGAGAAAATGGCCAACAAGGTGTTCGCCAAG AAATACTCAAGTGCTAGTTGTCTCCCAGCTAAGTACGTGGAGGAGGAATTCTGGCGCGAA ATTGCTTTTGGTAAAATGGATTTTGTTGAATATGCCTGTGATGTTGATGGTAGTGCTTTC TCCTCTTCTCCTCATGATCAACTTGGGAAAAGCAACTGGAACTTGAAGAATTTTTCACGG CTTTCCAATTCTGTGCTTAGACTTCTGCAGACACCAATTCCAGGAGTAACAGATCCAATG CTTTATATCGGGATGCTCTTCAGCATGTTTGCTTGGCATGTGGAAGATCATTATTTGTAC AGCATCAATTACCATCATTGTGGGGCATTTAAGACATGGTATGGCATACCGGGTGATGCT GCTCCTGGGTTTGAAAAGGTGGCTAGCCAGTTTGTATACAACAAGGATATTTTGGTTGGT GAAGGAGAGGATGCAGCATTTGATGTTCTCTTGGGGAAGACAACAATGTTCCCCCCAAAT GTCTTGTTAGACCACAACGTTCCTGTTTATAAAGCTGTGCAAAAACCTGGGGAGTTTGTC ATTACTTTCCCTCGTTCCTACCACGCGGGTTTCAGCCACGGCTTCAATTGTGGCGAGGCT GTCAACTTTGCTATCAGTGACTGGTTTCCTCTGGGTTCTGTGGCCAGCAGACGCTACGCG CTTCTGAACAGAACACCCTTGCTTGCACACGAGGAGTTACTTTGCCGTTCTGCAGTGCTT CTGTCCCACAAACTGTTAAACAGCGACCCAAAATCCCTCAATAAATCTGAGCATCCACAT TCACAGCGTTGTTTGAAGTCTTGCTTTGTGCAGTTGATGCGATTCCAGAGAAACACACGT GGCCTACTTGCTAAAATGGGCTCTCAGATACATTATAAGCCAAAAACATACCCGAATCTC TCATGTAGCATGTGTCGGCGTGATTGCTACATTACACATGTGTTGTGTGGATGCAACTTT GACCCAGTCTGTCTTCATCACGAACAAGAACTCCGGAGCTGCCCTTGTAAATCTAACCAG GTTGTCTACGTTAGGGAGGACATACAGGAGCTAGAAGCTCTATCAAGAAAATTTGAGAAG GATATTTGCTTGGATAAGGAAATAAGTGGTTTTGACTCATACAAGCAGGCCGAAAAGAAT GAGCCATTTTTTGAGATAACTCGGAACCTCAGGAACACTGAAGTAAATTTGATAGAGGAT GCCTTCTCAGGAGCAACTGCTGCTGATGCTGCAAAGAGTTCTCCTGCAACGTCAACACTG ACATCTTTTGCACAACATGATGTGCCTGTTCTTGCTGAAGCAATTGTCTGTGCTAATCAA GCCGACCAATTATACTCCACCACCGAGCAAACCATCAGCTCACCTTTAGTCAAAGGAACT GATGCTGTGGGTGCAAATTCATCCAGCATGGCTGATGCTAATAACGGAACTGGTTCTTGT AATGCTTCAGCTGTGGAATACAGTGGAAATTCAGATTCTGAATCTGAAATATTTCGAGTC AAGCGCAGGTCTGGCGTATCAGTAAAGCCTGCATCTGATGCCAAGACATCAAACTTGTCT GATCAACAGGTTCTCAGGCGGTTGAAGAAGGTGCGCCCTGAAATACAACAGCACAATAAG CGACCAGAAGACTATGGTCACTGTTCAGTTCCCTCAGGTCGTATGAGTATGAAGAATTTG AATTCATCCTCCTCATGTGGTGAAGAACACTGGAGGATGAAGCGGCGGCAGTTGGAGACT CAGCAGGATGAGAGCAGTTATTCTGCAAAGCAGAAGTCGTACTCGTATCCATCCACCAGC TATTCTTTCCGAGGAGAGTTTGTGGAAATGAGTAGAGATGCTGCTGCAGAAGTCCGACCA AAGCGACTGAAAATCCGGCTACCTTCTTCTAGCACGAACAGAGTGGTTGAGCAGGGCAGT TCAGGGCAAAGATTTACAAGGGATGACAAGTCGCTTGGTTGTTGGCCTGCAATTTAG

Peptide Sequence

PEP ID	Os10t0577600-01
PEP Infomation	pep chromosome:IRGSP-1.0:10:23025815:23031701:1 gene:Os10g0577600 transcript:Os10t0577600-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Jumonji 706 description:H3K9 demethylase, Floral organ development (Os10t0577600-01)
Sequence	MQQVEGRNCLPAEVRIGLETLKRRRLERMRLTAQNNAGDGPPVPARSGGDALRTPANCGV RLHANNGTALPSRTTQNKDPFAKRRVDKFDMSSLEWIDKIEECPVYYPTKEEFEDPIGYI QKIAPVASKYGICKIVSPVSASVPAGVVLMKEQPGFKFMTRVQPLRLAKWAEDDTVTFFM SERKYTFRDYEKMANKVFAKKYSSASCLPAKYVEEEFWREIAFGKMDFVEYACDVDGSAF SSSPHDQLGKSNWNLKNFSRLSNSVLRLLQTPIPGVTDPMLYIGMLFSMFAWHVEDHYLY SINYHHCGAFKTWYGIPGDAAPGFEKVASQFVYNKDILVGEGEDAAFDVLLGKTTMFPPN VLLDHNVPVYKAVQKPGEFVITFPRSYHAGFSHGFNCGEAVNFAISDWFPLGSVASRRYA LLNRTPLLAHEELLCRSAVLLSHKLLNSDPKSLNKSEHPHSQRCLKSCFVQLMRFQRNTR GLLAKMGSQIHYKPKTYPNLSCSMCRRDCYITHVLCGCNFDPVCLHHEQELRSCPCKSNQ VVYVREDIQELEALSRKFEKDICLDKEISGFDSYKQAEKNEPFFEITRNLRNTEVNLIED AFSGATAADAAKSSPATSTLTSFAQHDVPVLAEAIVCANQADQLYSTTEQTISSPLVKGT DAVGANSSSMADANNGTGSCNASAVEYSGNSDSESEIFRVKRRSGVSVKPASDAKTSNLS DQQVLRRLKKVRPEIQQHNKRPEDYGHCSVPSGRMSMKNLNSSSSCGEEHWRMKRRQLET QQDESSYSAKQKSYSYPSTSYSFRGEFVEMSRDAAAEVRPKRLKIRLPSSSTNRVVEQGS SGQRFTRDDKSLGCWPAI

Transcript Sequence

Transcript ID	Os10t0577600-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:10:23025815:23031701:1 gene:Os10g0577600 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Jumonji 706 description:H3K9 demethylase, Floral organ development (Os10t0577600-01)
Sequence	CTCTTTCCTCCTCCGCCGCCCGCCCGCCCATTGCCGAGCTCCCCGCCGCACGCCCCAGCT AACTACCACTCCGGCACGGCAGGGCAGGGCAGGGCTCGCCGCCGGAGGGGAATGTGGCAT CCTTACCTTCCCCCCTTGCCGTAAAACAAAGAAAGAAAGTCTCCCGTCTCGGCTCCTTGC GCCATCGTCGACAGGGGAGGGGAGGTGGCGAGCAGTAGCAGGGGAGGGGATCCTCCAGGT GGAGGGCAGAAACACCTATGCAACAGGTGGAGGGCAGGAACTGTCTTCCTGCGGAGGTCA GGATTGGCCTCGAGACGCTCAAGAGGCGCCGGCTTGAGAGGATGCGTTTGACTGCTCAGA ACAATGCCGGCGACGGTCCTCCGGTGCCCGCAAGGAGCGGTGGGGATGCGCTAAGGACTC CCGCAAACTGCGGGGTCAGGTTGCATGCTAACAATGGCACAGCTCTACCTAGCAGAACCA CCCAGAACAAGGACCCTTTTGCAAAGCGCAGGGTGGACAAGTTTGATATGTCTAGCCTAG AATGGATTGACAAGATCGAAGAATGCCCTGTGTACTATCCTACCAAGGAGGAGTTCGAGG ATCCCATTGGTTATATACAGAAGATTGCACCTGTGGCTTCGAAATACGGAATTTGCAAAA TCGTATCTCCAGTAAGCGCTTCTGTTCCTGCTGGTGTCGTGTTGATGAAGGAACAGCCTG GTTTCAAGTTCATGACCAGGGTTCAGCCGCTTCGCCTCGCCAAATGGGCTGAAGATGACA CGGTCACTTTCTTCATGAGCGAAAGAAAGTACACTTTCCGGGATTATGAGAAAATGGCCA ACAAGGTGTTCGCCAAGAAATACTCAAGTGCTAGTTGTCTCCCAGCTAAGTACGTGGAGG AGGAATTCTGGCGCGAAATTGCTTTTGGTAAAATGGATTTTGTTGAATATGCCTGTGATG TTGATGGTAGTGCTTTCTCCTCTTCTCCTCATGATCAACTTGGGAAAAGCAACTGGAACT TGAAGAATTTTTCACGGCTTTCCAATTCTGTGCTTAGACTTCTGCAGACACCAATTCCAG GAGTAACAGATCCAATGCTTTATATCGGGATGCTCTTCAGCATGTTTGCTTGGCATGTGG AAGATCATTATTTGTACAGCATCAATTACCATCATTGTGGGGCATTTAAGACATGGTATG GCATACCGGGTGATGCTGCTCCTGGGTTTGAAAAGGTGGCTAGCCAGTTTGTATACAACA AGGATATTTTGGTTGGTGAAGGAGAGGATGCAGCATTTGATGTTCTCTTGGGGAAGACAA CAATGTTCCCCCCAAATGTCTTGTTAGACCACAACGTTCCTGTTTATAAAGCTGTGCAAA AACCTGGGGAGTTTGTCATTACTTTCCCTCGTTCCTACCACGCGGGTTTCAGCCACGGCT TCAATTGTGGCGAGGCTGTCAACTTTGCTATCAGTGACTGGTTTCCTCTGGGTTCTGTGG CCAGCAGACGCTACGCGCTTCTGAACAGAACACCCTTGCTTGCACACGAGGAGTTACTTT GCCGTTCTGCAGTGCTTCTGTCCCACAAACTGTTAAACAGCGACCCAAAATCCCTCAATA AATCTGAGCATCCACATTCACAGCGTTGTTTGAAGTCTTGCTTTGTGCAGTTGATGCGAT TCCAGAGAAACACACGTGGCCTACTTGCTAAAATGGGCTCTCAGATACATTATAAGCCAA AAACATACCCGAATCTCTCATGTAGCATGTGTCGGCGTGATTGCTACATTACACATGTGT TGTGTGGATGCAACTTTGACCCAGTCTGTCTTCATCACGAACAAGAACTCCGGAGCTGCC CTTGTAAATCTAACCAGGTTGTCTACGTTAGGGAGGACATACAGGAGCTAGAAGCTCTAT CAAGAAAATTTGAGAAGGATATTTGCTTGGATAAGGAAATAAGTGGTTTTGACTCATACA AGCAGGCCGAAAAGAATGAGCCATTTTTTGAGATAACTCGGAACCTCAGGAACACTGAAG TAAATTTGATAGAGGATGCCTTCTCAGGAGCAACTGCTGCTGATGCTGCAAAGAGTTCTC CTGCAACGTCAACACTGACATCTTTTGCACAACATGATGTGCCTGTTCTTGCTGAAGCAA TTGTCTGTGCTAATCAAGCCGACCAATTATACTCCACCACCGAGCAAACCATCAGCTCAC CTTTAGTCAAAGGAACTGATGCTGTGGGTGCAAATTCATCCAGCATGGCTGATGCTAATA ACGGAACTGGTTCTTGTAATGCTTCAGCTGTGGAATACAGTGGAAATTCAGATTCTGAAT CTGAAATATTTCGAGTCAAGCGCAGGTCTGGCGTATCAGTAAAGCCTGCATCTGATGCCA AGACATCAAACTTGTCTGATCAACAGGTTCTCAGGCGGTTGAAGAAGGTGCGCCCTGAAA TACAACAGCACAATAAGCGACCAGAAGACTATGGTCACTGTTCAGTTCCCTCAGGTCGTA TGAGTATGAAGAATTTGAATTCATCCTCCTCATGTGGTGAAGAACACTGGAGGATGAAGC GGCGGCAGTTGGAGACTCAGCAGGATGAGAGCAGTTATTCTGCAAAGCAGAAGTCGTACT CGTATCCATCCACCAGCTATTCTTTCCGAGGAGAGTTTGTGGAAATGAGTAGAGATGCTG CTGCAGAAGTCCGACCAAAGCGACTGAAAATCCGGCTACCTTCTTCTAGCACGAACAGAG TGGTTGAGCAGGGCAGTTCAGGGCAAAGATTTACAAGGGATGACAAGTCGCTTGGTTGTT GGCCTGCAATTTAGAATTTAGAAAAAAATGCTGACGCAGGTGCTAACCTCTGATGGAGAT AAAGATTTCCTTGTTTAGGTGGGGCTGTTGACTACACGAAATGATAGGGCTGGGATGGAT CGATGAGGTTGAATATAAATGATTAGCACAGAAGCTGACTGACTTTAGAAGGCTGGTTAA TCGATTCTTTGTGCAGCAGTGCCTCCAATTTGAGGCACATCTAGGCACGGTTAGAAGAGA CAGACACATGACGATTCTTGTTGCTGGAGGTTCTGGGTCACTGCTTTGCTGCTGTTTGAT GCCTGCACTGCAAGTGACGTACACACACTATAGGACCTCGCTCTACCCTTTGATTATATC TCTCTATTTTTCTTCTTCTTTGTCAGCAACCTTAGCTGCTGCTACTCTATAGCTAACTGT ATTCTTTCATACGCTTGTTCCATCAAGTTAATCTGCTGCTTAATGCCATTGATTC