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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os10t0575401-00
CDS Infomation

cds chromosome:IRGSP-1.0:10:22879072:22879752:-1 gene:Os10g0575401 gene_biotype:protein_coding transcript_biotype:protein_coding description:VQ domain containing protein. (Os10t0575401-00)
Sequence

ATGAGCCCCACCTCGCCACGCCTGCCCCTCCCCGCCACCAACACCGCGCCGCCGTTTAAA
GTCCACAGGGGCTCCCGCCTCATCCACAAGCAGCCACCCGCCGCCGCATCGTCCTCCTCC
TCCTCCAACTCTTCCACCTCCTCCGCCTCCGGTCTGACGACGACGACGAAGAACAAGAAC
AATGCCGCCACCGCCGCCGCAGCTCACCGCCCGCCGTCGCGCCAGCAACACAAGCAGCAG
CAGCAGCAGCCAGTGATTATATACACGCACTCGCCGAAGGTGATCCGCACGAGCCCACGC
GACTTCATGTCCATCGTGCAGAGGCTCACCGGACTCGACAGCGCCCGCACCGCCGCCTCG
CACTCGCACCACGACTCCTCCTCCTCCTCCTCCAGCGCCGACAGCTGCACCAACACCTCC
CACCACCACGCACACGCGCCGCCACCGCCGTCGTCCCACTCCCACTCCTACGTCGTTGTC
GATCCGCCGCCGCCGCCACTGCCAACGACGCACCACTTCATTCCGCCGGAGATCCCACTG
CTCGCGCGTGCACCAGCCTCCGACCTGCCGCCGGCTCTCTGCGCGTACGCCGCCCCGTTC
GTGCCGGTGATGTCGTCGCCGGCCGCCACCGCCACCGCCACCGTCTTCTCCGCCCCGGAT
GTACCGTTCCCGGATCATTAA

Peptide Sequence

PEP ID

Os10t0575401-00
PEP Infomation

pep chromosome:IRGSP-1.0:10:22879072:22879752:-1 gene:Os10g0575401 transcript:Os10t0575401-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:VQ domain containing protein. (Os10t0575401-00)
Sequence

MSPTSPRLPLPATNTAPPFKVHRGSRLIHKQPPAAASSSSSSNSSTSSASGLTTTTKNKN
NAATAAAAHRPPSRQQHKQQQQQPVIIYTHSPKVIRTSPRDFMSIVQRLTGLDSARTAAS
HSHHDSSSSSSSADSCTNTSHHHAHAPPPPSSHSHSYVVVDPPPPPLPTTHHFIPPEIPL
LARAPASDLPPALCAYAAPFVPVMSSPAATATATVFSAPDVPFPDH

Transcript Sequence

Transcript ID

Os10t0575401-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:10:22879072:22879752:-1 gene:Os10g0575401 gene_biotype:protein_coding transcript_biotype:protein_coding description:VQ domain containing protein. (Os10t0575401-00)
Sequence

ATGAGCCCCACCTCGCCACGCCTGCCCCTCCCCGCCACCAACACCGCGCCGCCGTTTAAA
GTCCACAGGGGCTCCCGCCTCATCCACAAGCAGCCACCCGCCGCCGCATCGTCCTCCTCC
TCCTCCAACTCTTCCACCTCCTCCGCCTCCGGTCTGACGACGACGACGAAGAACAAGAAC
AATGCCGCCACCGCCGCCGCAGCTCACCGCCCGCCGTCGCGCCAGCAACACAAGCAGCAG
CAGCAGCAGCCAGTGATTATATACACGCACTCGCCGAAGGTGATCCGCACGAGCCCACGC
GACTTCATGTCCATCGTGCAGAGGCTCACCGGACTCGACAGCGCCCGCACCGCCGCCTCG
CACTCGCACCACGACTCCTCCTCCTCCTCCTCCAGCGCCGACAGCTGCACCAACACCTCC
CACCACCACGCACACGCGCCGCCACCGCCGTCGTCCCACTCCCACTCCTACGTCGTTGTC
GATCCGCCGCCGCCGCCACTGCCAACGACGCACCACTTCATTCCGCCGGAGATCCCACTG
CTCGCGCGTGCACCAGCCTCCGACCTGCCGCCGGCTCTCTGCGCGTACGCCGCCCCGTTC
GTGCCGGTGATGTCGTCGCCGGCCGCCACCGCCACCGCCACCGTCTTCTCCGCCCCGGAT
GTACCGTTCCCGGATCATTAA