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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os10t0573400-01
CDS Infomation

cds chromosome:IRGSP-1.0:10:22766332:22767420:1 gene:Os10g0573400 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:PYRABACTIN RESISTANCE 1 LIKE/REGULATORY COMPONENTS OF ABA RECEPTOR 10, pyrabactin resistance-like 10 description:Similar to Cyclase/dehydrase family protein. (Os10t0573400-01)
Sequence

ATGGAGCAGCAGGAGGAAGTGCCACCGCCGCCGGCGGGGCTGGGGCTGACGGCGGAGGAG
TACGCGCAGGTGCGGGCGACGGTGGAGGCGCACCACCGCTACGCCGTGGGGCCGGGCCAA
TGCTCCTCCCTCCTCGCGCAGCGCATCCACGCGCCGCCCGCCGCCGTCTGGGCCGTCGTC
CGCCGCTTCGACTGCCCCCAGGTGTACAAGCACTTCATCCGCAGCTGCGTCCTCCGGCCC
GACCCCCACCACGACGACAACGGCAACGACCTCCGCCCCGGCCGCCTCCGCGAGGTCAGC
GTCATCTCCGGCCTCCCCGCCAGCACCAGCACCGAGCGCCTCGACCTCCTCGACGACGCC
CACCGCGTCTTCGGCTTCACCATCACCGGCGGCGAGCACCGCCTCCGCAACTACCGATCC
GTCACCACCGTCTCCCAGCTCGACGAGATCTGCACCCTCGTCCTCGAGTCCTACATCGTC
GACGTCCCCGACGGCAACACCGAGGACGACACCCGCCTCTTCGCCGACACCGTCATCAGG
CTCAACCTCCAGAAGCTCAAGTCCGTCTCCGAGGCCAACGCCAACGCCGCTGCCGCCGCC
GCCGCTCCTCCTCCTCCTCCACCGGCGGCGGCGGAATAG

Peptide Sequence

PEP ID

Os10t0573400-01
PEP Infomation

pep chromosome:IRGSP-1.0:10:22766332:22767420:1 gene:Os10g0573400 transcript:Os10t0573400-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:PYRABACTIN RESISTANCE 1 LIKE/REGULATORY COMPONENTS OF ABA RECEPTOR 10, pyrabactin resistance-like 10 description:Similar to Cyclase/dehydrase family protein. (Os10t0573400-01)
Sequence

MEQQEEVPPPPAGLGLTAEEYAQVRATVEAHHRYAVGPGQCSSLLAQRIHAPPAAVWAVV
RRFDCPQVYKHFIRSCVLRPDPHHDDNGNDLRPGRLREVSVISGLPASTSTERLDLLDDA
HRVFGFTITGGEHRLRNYRSVTTVSQLDEICTLVLESYIVDVPDGNTEDDTRLFADTVIR
LNLQKLKSVSEANANAAAAAAAPPPPPPAAAE

Transcript Sequence

Transcript ID

Os10t0573400-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:10:22766332:22767420:1 gene:Os10g0573400 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:PYRABACTIN RESISTANCE 1 LIKE/REGULATORY COMPONENTS OF ABA RECEPTOR 10, pyrabactin resistance-like 10 description:Similar to Cyclase/dehydrase family protein. (Os10t0573400-01)
Sequence

AAATCCCAATTCCCCATCTGGCTCGCTCGACATCTTCTTCACTCCTCACTTCCCCCACTT
TCTCTACTCCTAGCATAGCAGCCTCACTTTCCCTCCTCGATCGAAGCAGCAGGCGGAGGC
GGAGGGGATCGGCGATGGAGCAGCAGGAGGAAGTGCCACCGCCGCCGGCGGGGCTGGGGC
TGACGGCGGAGGAGTACGCGCAGGTGCGGGCGACGGTGGAGGCGCACCACCGCTACGCCG
TGGGGCCGGGCCAATGCTCCTCCCTCCTCGCGCAGCGCATCCACGCGCCGCCCGCCGCCG
TCTGGGCCGTCGTCCGCCGCTTCGACTGCCCCCAGGTGTACAAGCACTTCATCCGCAGCT
GCGTCCTCCGGCCCGACCCCCACCACGACGACAACGGCAACGACCTCCGCCCCGGCCGCC
TCCGCGAGGTCAGCGTCATCTCCGGCCTCCCCGCCAGCACCAGCACCGAGCGCCTCGACC
TCCTCGACGACGCCCACCGCGTCTTCGGCTTCACCATCACCGGCGGCGAGCACCGCCTCC
GCAACTACCGATCCGTCACCACCGTCTCCCAGCTCGACGAGATCTGCACCCTCGTCCTCG
AGTCCTACATCGTCGACGTCCCCGACGGCAACACCGAGGACGACACCCGCCTCTTCGCCG
ACACCGTCATCAGGCTCAACCTCCAGAAGCTCAAGTCCGTCTCCGAGGCCAACGCCAACG
CCGCTGCCGCCGCCGCCGCTCCTCCTCCTCCTCCACCGGCGGCGGCGGAATAGCCTTTTT
CTTTTCTTTTTGGACCTCTCTGCAATTTCACTTCTATTCAGGGAGGTGCTTCGAATTTGC
TCCATGTCTCATGAAGTTGGAGGAGGAAGGGTCAGCTTCTAATACATCTCATTCCTGGTG
GTGCTGCCTGTAATAATCTCTTCATCTTCTTTTTTCCTCTCCTCCTCCTCTTCTCTTCCT
GGATTTCTTTTGCTTGGAATTTTTACTTACCTTTGTGTGTGTGTCTCACTTCCTGATTGG
AATCCATATTTGCTTTTCGGTGGTTTTGTTCTTCATTCAAATTCAAATTAATCTATCTAG
CATTTGTTC