Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os10t0572100-01
CDS Infomation	cds chromosome:IRGSP-1.0:10:22682292:22684755:-1 gene:Os10g0572100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Uncharacterised protein family UPF0005 domain containing protein. (Os10t0572100-01)
Sequence	ATGGCTTGTGCTCCAGATCCCAGCAATAACAAGAATAGCTCGTCGATTCTTCATCAGCAA GTGAAGAAAATTAGCAGGATTCCTTTTTCATGGGGAGCACATGCATGGGGTATAGGAAGA GAAGATCCAAGAAGGGCTATTCATGCTCTCAAGGTTGGGACAGCACTCACACTGGTCTCA CTCCTGTACATACTTGAACCGTTGTTCAAGGGAGTGGGAAAGAATGCAATGTGGGCTGTG ATGACCGTTGTTGTTGTGCTTGAATTTACTGCAGGTGCAACTATATGCAAAGGGCTGAAT AGAGGGTTAGGAACAATCTTGGCAGGATCTCTAGCATTTATAATTGAACTTGTAGCAGTA CGATCTGGAAAAGTATTCCGGGCTCTGTTTGTTGGATCATCAGTCTTTCTGATAGGATTT GCTGCAACATATTTGAGATTCTTCCCATCCATTAAGAAGAACTATGATTATGGGGTCGTG ATTTTCCTGCTAACTTTCAATCTGATAACAGTATCAAGCTTCCGTCAAGAGGATGTGGTG CCTTTAGCACGAGATCGCTTAAGTACTATTGCGATAGGTTGTGCAATATGCCTATTCATG AGTCTTTTTGTATTGCCAAACTGGTCTGGAGAAGACCTCCACAGTTCTACAGTACGCAAA TTTGAAGGATTAGCAAGATCAATTGAAGCTTGTGTTACTGAGTATTTCCAAGATCAAGAC AAGGATGATAAAATTCTTGATAAGCAGGCATCAAGAGCTTCCATTCACATTGGTTATAGA GCAGTCCTTGACTCAAAATCAAGTGATGAAACCCTAGCACACTATGCAAGCTGGGAGCCA AGACATTCAATGCAATGTTACAGTTATCCATGGCAAAAGTATGTGAAGATTGGATCTGTT CTTAGGCACTTTGCATATACTGTCGCAGCACTTCATGGATGTCTAGAATCTGAGATTCAG ACTCCACCATCCGTCAGGTCACTATTCCGAAACCCATGTACTAGAGTTGCACGAGAAGTG GTCAAGGTTTTACAAGAGCTTGCAGTAAGCATAAGAGATCATCATCGTTGTGCCCCTGAT GTGCTGTCTGATCATCTTCATGAAGCACTACAGGATCTAAACTCGGCTATAAGATCACAG CCACGGCTCTTTCTCGGCTCCAAACATGCATGTGCAAATAGTCATGTGCTGATGGAATTA AATTCTAGCAAGCATACAGCCACAAGAACTACTCTACCATCATTCAAGACTGATGGCACA TCCCTATTAGAAAGGAGGAATACAAAAGCAGACCAACCATCAGAACGGAATGAGCGGGGC ACATTAAGGCCAACACTAAGTAAGATAGCCATGACAAGCCTTGAGTTCTCAGAAGCACTT CCATTCGCTGCGTTTGCTTCATTGTTGGTAGAAATGGTAGTTCGGCTGGAGATGGTTATT GAAGAAGTGAAGGAACTGGAGAGAGCAGCAAATTTTAGAGAATTCACTGGACATGACTAT CTGACCATTGATCTTACTTCCAATGACAAGATGAGAAACCCAAATGGCGTACCATTAGAC AGCCACACAATTTCCACTGCAGCTGAGTAA

Peptide Sequence

PEP ID	Os10t0572100-01
PEP Infomation	pep chromosome:IRGSP-1.0:10:22682292:22684755:-1 gene:Os10g0572100 transcript:Os10t0572100-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Uncharacterised protein family UPF0005 domain containing protein. (Os10t0572100-01)
Sequence	MACAPDPSNNKNSSSILHQQVKKISRIPFSWGAHAWGIGREDPRRAIHALKVGTALTLVS LLYILEPLFKGVGKNAMWAVMTVVVVLEFTAGATICKGLNRGLGTILAGSLAFIIELVAV RSGKVFRALFVGSSVFLIGFAATYLRFFPSIKKNYDYGVVIFLLTFNLITVSSFRQEDVV PLARDRLSTIAIGCAICLFMSLFVLPNWSGEDLHSSTVRKFEGLARSIEACVTEYFQDQD KDDKILDKQASRASIHIGYRAVLDSKSSDETLAHYASWEPRHSMQCYSYPWQKYVKIGSV LRHFAYTVAALHGCLESEIQTPPSVRSLFRNPCTRVAREVVKVLQELAVSIRDHHRCAPD VLSDHLHEALQDLNSAIRSQPRLFLGSKHACANSHVLMELNSSKHTATRTTLPSFKTDGT SLLERRNTKADQPSERNERGTLRPTLSKIAMTSLEFSEALPFAAFASLLVEMVVRLEMVI EEVKELERAANFREFTGHDYLTIDLTSNDKMRNPNGVPLDSHTISTAAE

Transcript Sequence

Transcript ID	Os10t0572100-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:10:22682292:22684755:-1 gene:Os10g0572100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Uncharacterised protein family UPF0005 domain containing protein. (Os10t0572100-01)
Sequence	ACTTGCTTCGAGCATTTGGTACCACCTATTTTGCATTGCCATCTTGTAAGAAACCTCAGC ATCCACCAAGAGTTTCAGGCCGCACCAATGGCTTGTGCTCCAGATCCCAGCAATAACAAG AATAGCTCGTCGATTCTTCATCAGCAAGTGAAGAAAATTAGCAGGATTCCTTTTTCATGG GGAGCACATGCATGGGGTATAGGAAGAGAAGATCCAAGAAGGGCTATTCATGCTCTCAAG GTTGGGACAGCACTCACACTGGTCTCACTCCTGTACATACTTGAACCGTTGTTCAAGGGA GTGGGAAAGAATGCAATGTGGGCTGTGATGACCGTTGTTGTTGTGCTTGAATTTACTGCA GGTGCAACTATATGCAAAGGGCTGAATAGAGGGTTAGGAACAATCTTGGCAGGATCTCTA GCATTTATAATTGAACTTGTAGCAGTACGATCTGGAAAAGTATTCCGGGCTCTGTTTGTT GGATCATCAGTCTTTCTGATAGGATTTGCTGCAACATATTTGAGATTCTTCCCATCCATT AAGAAGAACTATGATTATGGGGTCGTGATTTTCCTGCTAACTTTCAATCTGATAACAGTA TCAAGCTTCCGTCAAGAGGATGTGGTGCCTTTAGCACGAGATCGCTTAAGTACTATTGCG ATAGGTTGTGCAATATGCCTATTCATGAGTCTTTTTGTATTGCCAAACTGGTCTGGAGAA GACCTCCACAGTTCTACAGTACGCAAATTTGAAGGATTAGCAAGATCAATTGAAGCTTGT GTTACTGAGTATTTCCAAGATCAAGACAAGGATGATAAAATTCTTGATAAGCAGGCATCA AGAGCTTCCATTCACATTGGTTATAGAGCAGTCCTTGACTCAAAATCAAGTGATGAAACC CTAGCACACTATGCAAGCTGGGAGCCAAGACATTCAATGCAATGTTACAGTTATCCATGG CAAAAGTATGTGAAGATTGGATCTGTTCTTAGGCACTTTGCATATACTGTCGCAGCACTT CATGGATGTCTAGAATCTGAGATTCAGACTCCACCATCCGTCAGGTCACTATTCCGAAAC CCATGTACTAGAGTTGCACGAGAAGTGGTCAAGGTTTTACAAGAGCTTGCAGTAAGCATA AGAGATCATCATCGTTGTGCCCCTGATGTGCTGTCTGATCATCTTCATGAAGCACTACAG GATCTAAACTCGGCTATAAGATCACAGCCACGGCTCTTTCTCGGCTCCAAACATGCATGT GCAAATAGTCATGTGCTGATGGAATTAAATTCTAGCAAGCATACAGCCACAAGAACTACT CTACCATCATTCAAGACTGATGGCACATCCCTATTAGAAAGGAGGAATACAAAAGCAGAC CAACCATCAGAACGGAATGAGCGGGGCACATTAAGGCCAACACTAAGTAAGATAGCCATG ACAAGCCTTGAGTTCTCAGAAGCACTTCCATTCGCTGCGTTTGCTTCATTGTTGGTAGAA ATGGTAGTTCGGCTGGAGATGGTTATTGAAGAAGTGAAGGAACTGGAGAGAGCAGCAAAT TTTAGAGAATTCACTGGACATGACTATCTGACCATTGATCTTACTTCCAATGACAAGATG AGAAACCCAAATGGCGTACCATTAGACAGCCACACAATTTCCACTGCAGCTGAGTAAGTA CTGAATAATAGATCAAATCAGTAGATGATCACTCTGAAGCAGATATGTATTTCTTTTTGG ACTAAGAAAATATGGCCTGTGAGGCTGTGATTCCCAATAAATGTTGTTAGAATGACAACT CATAAAAAAACAATATTAAACCTACAGGATGTTTATCGGAGTTGGATGATGTAAAAAAAA TTTCAGCAGAAAGTACTCATGCTTTTCCCC