Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os10t0567100-01
CDS Infomation	cds chromosome:IRGSP-1.0:10:22473573:22477206:-1 gene:Os10g0567100 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Chlorophyll a oxygenase 2 description:Similar to Chlorophyll b synthase (Fragment). (Os10t0567100-01)
Sequence	ATGGAAACCACTGTGTCTTTGCTGCCGCACCTGCTCGTCAAGCCTTCCTCCTCCTTCAGC TGTTGCTTCACAATGGGCATTGGTCGTCGATATGGAAGAATCAAGGTGTATGCAGTGCTC GGTGATGATGAAGCTCAACATGCCAAGAACAACATGAGGGGGGCCTTGTTCCATGTCGAT AACCCCGGGCCAATGGCTCCCATTGCAAAAGGCAACTTCTTGGATGTTAACCAGGCCCTT GAGGTGGTCCGATTCGGCATCCAGTACTGCGATTGGAGGGCGCGGCAGGACCTCCTCACC ATCATGGTTCTGCACAACAAGGTGGTAGAGGTTCTCAAATCTTTAGCAATAGAGTTCAAG TCAAATGGAACCTTGAGGAAAGAGCTTGCAGAGTTGCAGGAAGAATTGGCCAAAGCTCAC AATCAGGTTCATTTATCAGAAACTAGAGCATCATCTGCACTTGATAAGTTAGCACAAGCG GATAACCTGGTGAATGACAGACTGTTGCAAGACGGAGGCTCTAGTGCATCTATAGACAAC TATGTTTCTCTTGCTTCAAGAACGTCATCAGCGTCCCGTTTTGTGAACAAGAAAACTCTG CGTCCGAGTCTGGACGTGTCTGGTCCAGTGCAGCCATACAATCCCAATCTGAAAAACTTC TGGTACCCAGTTGTCTTCTCCGGTGACCTGAAAGATGATACAATGGTACCAATAGATTGT TTTGAGGAGCAGTGGGTAATTTTCCGAGGAAAGGATGGGAGACCTGGATGTGTTCAGAAC ACATGTGCTCACAGAGCCTGCCCTCTTCATCTTGGCTCAGTTAGTGAGGGTAGAATCCAA TGCCCTTTCCATGGGTGGGAGTATTCAACTGATGGAAAATGTGAGAAAATGCCAGCCACG AAGTTGCTCAATGTGCGCATCCGGTCATTGCCATGCTTTGAGCAAGAAGGCATGGTTTGG ATCTGGCCTGGTGATGGCACACCGGAGTCGACTATCCCTTCTCTGCAGCCCCCTTCAGGA TTTACAATTCATGCAGAGATGGTGATGGAGCTACCGGTGGAGCATGGACTTCTGCTGGAC AATCTATTAGATATTGCTCATGCTCCTTTTGCTCATACGTCCACCTTTGCCAAGGGTTGG AGTGTTCCAAGCTTGGTGAAGTTCTTGACACCTGCATCTGGGCTCCAAGGGTACTGGGAT CCTTACCCCATCGACATGGAGTTTCGACCGCCATGCATGGTCTTGTCAACCACTGGCATC TCAAAGCCTGGAAAACTAGAGGGAAAGAGCATCAAGCAATGTTCCACACATCTCCACCAA CTCCATATCTGCTTGCCCTCCTCCAGGAATAAAACCAGGATGCTGTACCAGATGTCCCTC AACTTTGCTCCCTGGCTCAAGCACATCCCTTTCATGCACATACTATGGTCACATTTTGGT GAGAAGGTCTTGAATGAGGACCTACGGCTTGTGCTTGGGCAGCAAGAGCGGATGATAAAT GGCGCGAACGTATGGAACTGGCCAGTGTCATATGACAAGCTTGGTATCCGGTATCGGTTA TGGAGAGACGCCATTGAGAGGGGAGCAAACAGGTTGCCATTCAATAACCAAAGTGAGAGT GGATCATAG

Peptide Sequence

PEP ID	Os10t0567100-01
PEP Infomation	pep chromosome:IRGSP-1.0:10:22473573:22477206:-1 gene:Os10g0567100 transcript:Os10t0567100-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Chlorophyll a oxygenase 2 description:Similar to Chlorophyll b synthase (Fragment). (Os10t0567100-01)
Sequence	METTVSLLPHLLVKPSSSFSCCFTMGIGRRYGRIKVYAVLGDDEAQHAKNNMRGALFHVD NPGPMAPIAKGNFLDVNQALEVVRFGIQYCDWRARQDLLTIMVLHNKVVEVLKSLAIEFK SNGTLRKELAELQEELAKAHNQVHLSETRASSALDKLAQADNLVNDRLLQDGGSSASIDN YVSLASRTSSASRFVNKKTLRPSLDVSGPVQPYNPNLKNFWYPVVFSGDLKDDTMVPIDC FEEQWVIFRGKDGRPGCVQNTCAHRACPLHLGSVSEGRIQCPFHGWEYSTDGKCEKMPAT KLLNVRIRSLPCFEQEGMVWIWPGDGTPESTIPSLQPPSGFTIHAEMVMELPVEHGLLLD NLLDIAHAPFAHTSTFAKGWSVPSLVKFLTPASGLQGYWDPYPIDMEFRPPCMVLSTTGI SKPGKLEGKSIKQCSTHLHQLHICLPSSRNKTRMLYQMSLNFAPWLKHIPFMHILWSHFG EKVLNEDLRLVLGQQERMINGANVWNWPVSYDKLGIRYRLWRDAIERGANRLPFNNQSES GS

Transcript Sequence

Transcript ID	Os10t0567100-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:10:22473573:22477206:-1 gene:Os10g0567100 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Chlorophyll a oxygenase 2 description:Similar to Chlorophyll b synthase (Fragment). (Os10t0567100-01)
Sequence	ACTGCTACTGCTCCATGGAAACCACTGTGTCTTTGCTGCCGCACCTGCTCGTCAAGCCTT CCTCCTCCTTCAGCTGTTGCTTCACAATGGGCATTGGTCGTCGATATGGAAGAATCAAGG TGTATGCAGTGCTCGGTGATGATGAAGCTCAACATGCCAAGAACAACATGAGGGGGGCCT TGTTCCATGTCGATAACCCCGGGCCAATGGCTCCCATTGCAAAAGGCAACTTCTTGGATG TTAACCAGGCCCTTGAGGTGGTCCGATTCGGCATCCAGTACTGCGATTGGAGGGCGCGGC AGGACCTCCTCACCATCATGGTTCTGCACAACAAGGTGGTAGAGGTTCTCAAATCTTTAG CAATAGAGTTCAAGTCAAATGGAACCTTGAGGAAAGAGCTTGCAGAGTTGCAGGAAGAAT TGGCCAAAGCTCACAATCAGGTTCATTTATCAGAAACTAGAGCATCATCTGCACTTGATA AGTTAGCACAAGCGGATAACCTGGTGAATGACAGACTGTTGCAAGACGGAGGCTCTAGTG CATCTATAGACAACTATGTTTCTCTTGCTTCAAGAACGTCATCAGCGTCCCGTTTTGTGA ACAAGAAAACTCTGCGTCCGAGTCTGGACGTGTCTGGTCCAGTGCAGCCATACAATCCCA ATCTGAAAAACTTCTGGTACCCAGTTGTCTTCTCCGGTGACCTGAAAGATGATACAATGG TACCAATAGATTGTTTTGAGGAGCAGTGGGTAATTTTCCGAGGAAAGGATGGGAGACCTG GATGTGTTCAGAACACATGTGCTCACAGAGCCTGCCCTCTTCATCTTGGCTCAGTTAGTG AGGGTAGAATCCAATGCCCTTTCCATGGGTGGGAGTATTCAACTGATGGAAAATGTGAGA AAATGCCAGCCACGAAGTTGCTCAATGTGCGCATCCGGTCATTGCCATGCTTTGAGCAAG AAGGCATGGTTTGGATCTGGCCTGGTGATGGCACACCGGAGTCGACTATCCCTTCTCTGC AGCCCCCTTCAGGATTTACAATTCATGCAGAGATGGTGATGGAGCTACCGGTGGAGCATG GACTTCTGCTGGACAATCTATTAGATATTGCTCATGCTCCTTTTGCTCATACGTCCACCT TTGCCAAGGGTTGGAGTGTTCCAAGCTTGGTGAAGTTCTTGACACCTGCATCTGGGCTCC AAGGGTACTGGGATCCTTACCCCATCGACATGGAGTTTCGACCGCCATGCATGGTCTTGT CAACCACTGGCATCTCAAAGCCTGGAAAACTAGAGGGAAAGAGCATCAAGCAATGTTCCA CACATCTCCACCAACTCCATATCTGCTTGCCCTCCTCCAGGAATAAAACCAGGATGCTGT ACCAGATGTCCCTCAACTTTGCTCCCTGGCTCAAGCACATCCCTTTCATGCACATACTAT GGTCACATTTTGGTGAGAAGGTCTTGAATGAGGACCTACGGCTTGTGCTTGGGCAGCAAG AGCGGATGATAAATGGCGCGAACGTATGGAACTGGCCAGTGTCATATGACAAGCTTGGTA TCCGGTATCGGTTATGGAGAGACGCCATTGAGAGGGGAGCAAACAGGTTGCCATTCAATA ACCAAAGTGAGAGTGGATCATAGTAGCTGCAATGCTGCACTGACAGTAGCCTCTTTCAAC TCTTGTCGCATTTCTTGGCGAGATGAAGATGACTATGGCCAGAACTATAGTCACTTAGTC AGAATATGTATATGCGCAGTTTGTTTAGGCGTGCTGCGTTCATCCCTGCGTGGTTCATCC GCCTGAGCTTCTGGAGAGGAAAGCTAATGGAAGGAAGGGTTGATAGACTGATAGGCGACA ATTGTTATGTGTAATTTTAAGTGTACTAGTGAGCGTGCATATGGAATCCATGTGTGTAAT TTCAAGTGTACTAATCAGTGTGCACGTGG