Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os10t0566900-01
CDS Infomation

cds chromosome:IRGSP-1.0:10:22464363:22466552:1 gene:Os10g0566900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os10t0566900-01)
Sequence

ATGGAGTCGTCGGTGCGGAGGGTGCAGCAGCGGGTGAGGAAGGCGCGGGAGGAGATGGAT
CGGTGGGACGACCTCAACTCCCGCCTCCTCTCTCAGTTCGCAAACGCTGCCGCCATCGTT
GCTCGTCTCCCGGTGCTGGAAGAGGTTAAGAACTATGGTGTCCTACGATGTGTCCCTAAC
ATCAGAGAGAATCTTTTGGGTAAGCAAATGGAGAGTTTGGAGATCATCTTCGTCTCTATG
AGGGAGACAGTGGAGGAATTCAATAGCATTGCCAGATCTTTACATAAGGCTTTGCGGGAT
ACTAATCAAATGGTGAGAGGTGGGTCTGCACTCAGTGCAAAACAGATGCAGTTACAAGTG
GGAATTTTGCCAACTATAGCAGACTGCTTGGATGGGCTACGGACTTTATGTGAAATGCAC
CAGGCCGAGTATGCACTAAAATCATCAGTCATCTCTTCGCTGACATGGACGAGCAGTTCC
AGTGACATTGCCGCGATGCGTCAACTCTTAGTAGACCAGCCAAACATACCAAAAGATGAA
GTGCAAGCTATTTTTGACATTATATTCGCAGATGAAATCTGTTGA

Peptide Sequence

PEP ID

Os10t0566900-01
PEP Infomation

pep chromosome:IRGSP-1.0:10:22464363:22466552:1 gene:Os10g0566900 transcript:Os10t0566900-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os10t0566900-01)
Sequence

MESSVRRVQQRVRKAREEMDRWDDLNSRLLSQFANAAAIVARLPVLEEVKNYGVLRCVPN
IRENLLGKQMESLEIIFVSMRETVEEFNSIARSLHKALRDTNQMVRGGSALSAKQMQLQV
GILPTIADCLDGLRTLCEMHQAEYALKSSVISSLTWTSSSSDIAAMRQLLVDQPNIPKDE
VQAIFDIIFADEIC

Transcript Sequence

Transcript ID

Os10t0566900-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:10:22464363:22466552:1 gene:Os10g0566900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os10t0566900-01)
Sequence

GAGCAGGAGACCCCTCCCGCCGTTCGGAGCTCGGACGCTTTCTCGCCGCTGCTCACCTTC
CGTTCCCTCCCCTTCCACGCGCCGCCGCCGCCGATTCTTTGCTCCGTTTGGCGGCCGCTG
GGCCGTACGGGAGGGGGTGGGACTGGATGGAGTCGTCGGTGCGGAGGGTGCAGCAGCGGG
TGAGGAAGGCGCGGGAGGAGATGGATCGGTGGGACGACCTCAACTCCCGCCTCCTCTCTC
AGTTCGCAAACGCTGCCGCCATCGTTGCTCGTCTCCCGGTGCTGGAAGAGGTTAAGAACT
ATGGTGTCCTACGATGTGTCCCTAACATCAGAGAGAATCTTTTGGGTAAGCAAATGGAGA
GTTTGGAGATCATCTTCGTCTCTATGAGGGAGACAGTGGAGGAATTCAATAGCATTGCCA
GATCTTTACATAAGGCTTTGCGGGATACTAATCAAATGGTGAGAGGTGGGTCTGCACTCA
GTGCAAAACAGATGCAGTTACAAGTGGGAATTTTGCCAACTATAGCAGACTGCTTGGATG
GGCTACGGACTTTATGTGAAATGCACCAGGCCGAGTATGCACTAAAATCATCAGTCATCT
CTTCGCTGACATGGACGAGCAGTTCCAGTGACATTGCCGCGATGCGTCAACTCTTAGTAG
ACCAGCCAAACATACCAAAAGATGAAGTGCAAGCTATTTTTGACATTATATTCGCAGATG
AAATCTGTTGATGTACTTGCACGATTGCTATTGGAAGCACTATGCCCTGGAGTCCTGGAC
ATGTTGACATCATTATGTTTTGATGTACTTGCATGCCCAGATGGCCAGATGAACCAAAGA
TGCTGATGCACTGTAACAAAGCTGGAATTGCTGTGTCTGGCTGCCAGCAAGAGAGTAGGA
TGTAGGAGTAGCTTTCTAACATACACTAAAATATCTTCCCTTTTTTTATCCCCAAATTTT
CCTAGTTCTATGTTAACAGTCATGTCCTGGAGACTAAAATTTATCTTTGACTGAATGCAC
ATTTTCATGTCCTGGAGACTATAATTTATCT