Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os10t0566700-00
CDS Infomation

cds chromosome:IRGSP-1.0:10:22453084:22456620:1 gene:Os10g0566700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Chaperonin Cpn10 family protein. (Os10t0566700-00)
Sequence

ATGGCCCCCTCCCTCCTCGCCGCCGCCGCCTCGCCCTTCCTCCTCCACGGCGCCGCCGCC
GCCAGTGGCAGCCGCAGGCCGCTCGTCGCCGCCGCCGCCACCGGCCGCCGCGCCGCCTCC
TCCCTCCGCGTCGCCGCCCTCAAGTACGACCCTTCCAAGGTGGCGCCGCAGTCCGACCGG
GTGCTCGTCCGCCTCGAACAGATTCCTGAGAAATCTGTTGGAGGAGTCCTGCTGCCAAAA
TCTGCTGTTAAGTTTGAGAGGTATTTGATGGGTGAGATTTTGTCTGTTGGTGCTGATGTT
AATGAAGTTGAAGCTGGAAAGAAGGTTCTCTTCTCTGACATAAATGCTTATGAGGTGGAC
CTGGGTACCGATGAGAAGCACTGCTTCTGCCGTGAGTCTGATCTGTTAGCCGTTGTTGAA
TGA

Peptide Sequence

PEP ID

Os10t0566700-00
PEP Infomation

pep chromosome:IRGSP-1.0:10:22453084:22456620:1 gene:Os10g0566700 transcript:Os10t0566700-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Chaperonin Cpn10 family protein. (Os10t0566700-00)
Sequence

MAPSLLAAAASPFLLHGAAAASGSRRPLVAAAATGRRAASSLRVAALKYDPSKVAPQSDR
VLVRLEQIPEKSVGGVLLPKSAVKFERYLMGEILSVGADVNEVEAGKKVLFSDINAYEVD
LGTDEKHCFCRESDLLAVVE

Transcript Sequence

Transcript ID

Os10t0566700-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:10:22453084:22456620:1 gene:Os10g0566700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Chaperonin Cpn10 family protein. (Os10t0566700-00)
Sequence

AAGCAGATAAGAGAAGCGCCTGTCCTCCTCTCCGGCGAAGCCTCTGCCTCCTCTCCACTT
CTTCTAGAACCTTCCGCGCTTCCGTGCTCCCCACCGCCACCTCGCCCGCTCGCTGTCCCC
AGATGGCCCCCTCCCTCCTCGCCGCCGCCGCCTCGCCCTTCCTCCTCCACGGCGCCGCCG
CCGCCAGTGGCAGCCGCAGGCCGCTCGTCGCCGCCGCCGCCACCGGCCGCCGCGCCGCCT
CCTCCCTCCGCGTCGCCGCCCTCAAGTACGACCCTTCCAAGGTGGCGCCGCAGTCCGACC
GGGTGCTCGTCCGCCTCGAACAGATTCCTGAGAAATCTGTTGGAGGAGTCCTGCTGCCAA
AATCTGCTGTTAAGTTTGAGAGGTATTTGATGGGTGAGATTTTGTCTGTTGGTGCTGATG
TTAATGAAGTTGAAGCTGGAAAGAAGGTTCTCTTCTCTGACATAAATGCTTATGAGGTGG
ACCTGGGTACCGATGAGAAGCACTGCTTCTGCCGTGAGTCTGATCTGTTAGCCGTTGTTG
AATGAGTTTTTACTCCAAAATCGGAGTGTCCAATTCCACAGGCTAGAACAAATCCCAAAT
TTATTATCTGCTATGTGATGGCGATGAGTTGAACAATTTGATATGTCATTCTCTACAAAT
GAATTTTGGCTTCTAGGAGTATAAATTGGGACAGCAAATATCCTATCAATCAATCTTATT
CACAGTTACACTAATTTTCTTAAATATATTGATGTCCTGGAGATAAACGAAACATGAATT
ATGGCTAAAAAAAGGCCAGAGTCTAGAACTTTGACTTGTTTCCAATGCACGGCTGGAGCT
TAGAGCTGGCTGCTGAGTGTTGACCGC