Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os10t0565500-01
CDS Infomation	cds chromosome:IRGSP-1.0:10:22373332:22374952:-1 gene:Os10g0565500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Retrotransposon protein. (Os10t0565500-01)
Sequence	ATGGCAGTTCAGGCGCATTACCACCACCACCATCACCACCAGCAGCAGCATCAGCCTCCT CCTCTCTTCCTCGCCAGAGGCGTCGTCGTCTCGCCGGAGACCACCAGGCCGGCGGGCATG GAGTATCACTACCAGCAGCATCAGCAGCCTCCCCTCTTCTTGGACTTCTCGCATGGAGAT GGAGATGGGGGCAACTCGAGGAAGCGGCCGCGAGAGGCGGATGCGGCGGCGGCCATGGTT GCTGCGCCGCCGCCGCAGATGTTGTCGCTGCAGCCGCAGGCGCAGGCGCAGGGGCACAAG GTGGTGAGCCTGGCGCAGCTGCACAACAAGCGGCCGCCGGCGTCGACGGGGCTCCGCCTC GACTTCGACGACGGCGGGTCGGAGCACGTGTCGACGACGACCACCTCCTCCGCGTCGTCT CTCCTCTCCGACGAGCTCGCCACGCAGTTCGACCGGTGCAAGAACGAGATGGCGCGTATG TTCCAGGATCATACGGAGAGGCTGCGCCGCGCGCTGGGCGAGGTGAGGCGGCGGCACTAC CGGTCGCTGCTCGGCGCGGCGGAGGCGGCGGCGGCGCGCCGGATGAGGGAGAAGGAGGCG GAGGCCTCGAATGCGGCGCGGCGCGGCGCCGAGCTGGAGGAGCGCGTCGCGCGGCTGCGG GCGGAGGCGGCGGCGTGGCAGGCGAAGGCGCTCGCCGACCAGTCCACCGCCGCGGCGCTC CACGCGCAGCTCCAGCAGGCGGCGGCGGCCGCGGCGCAGGCGAGGGGCAGCAAGTCGCCG GAGGACGACGACAACATCAACCCCAACGCCGCCGCCGCGGACGACGCCGAGTCGGGGTTC GTCGACCCGGACAGAGTGGAGGAGGTGACCCCGCCGCCGCCGCCGTCGCGGCCGTGCCGG ACGTGCCGGGCGAGGCCGTCCTCCGTCGTCCTCCTCCCCTGCCGCCACCTCTGCGTGTGC GAGGCGTGCGAGCCCGCCGTCTCCACCGCCATCGCCGCCGCCTGCCCCACGTGCCGCGGC GCGGTCACCGGCACCGTGCAGGTCTTCATCTCGTGA

Peptide Sequence

PEP ID	Os10t0565500-01
PEP Infomation	pep chromosome:IRGSP-1.0:10:22373332:22374952:-1 gene:Os10g0565500 transcript:Os10t0565500-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Retrotransposon protein. (Os10t0565500-01)
Sequence	MAVQAHYHHHHHHQQQHQPPPLFLARGVVVSPETTRPAGMEYHYQQHQQPPLFLDFSHGD GDGGNSRKRPREADAAAAMVAAPPPQMLSLQPQAQAQGHKVVSLAQLHNKRPPASTGLRL DFDDGGSEHVSTTTTSSASSLLSDELATQFDRCKNEMARMFQDHTERLRRALGEVRRRHY RSLLGAAEAAAARRMREKEAEASNAARRGAELEERVARLRAEAAAWQAKALADQSTAAAL HAQLQQAAAAAAQARGSKSPEDDDNINPNAAAADDAESGFVDPDRVEEVTPPPPPSRPCR TCRARPSSVVLLPCRHLCVCEACEPAVSTAIAAACPTCRGAVTGTVQVFIS

Transcript Sequence

Transcript ID	Os10t0565500-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:10:22373332:22374952:-1 gene:Os10g0565500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Retrotransposon protein. (Os10t0565500-01)
Sequence	GAGGACCAGTTCGCTCGCGCTGCCCGCAACTCTCTCCTACCACCACCGCCCCCGGGGTGC CTCCTCACACACTTGGCGCGCGCCTCGATTCATTCCTCCTCTTCCTTCCCCCCTTCTTTT TCTTCCCCCACCTTGCTTGCAATTGCCGCGGACCAATGGCAGTTCAGGCGCATTACCACC ACCACCATCACCACCAGCAGCAGCATCAGCCTCCTCCTCTCTTCCTCGCCAGAGGCGTCG TCGTCTCGCCGGAGACCACCAGGCCGGCGGGCATGGAGTATCACTACCAGCAGCATCAGC AGCCTCCCCTCTTCTTGGACTTCTCGCATGGAGATGGAGATGGGGGCAACTCGAGGAAGC GGCCGCGAGAGGCGGATGCGGCGGCGGCCATGGTTGCTGCGCCGCCGCCGCAGATGTTGT CGCTGCAGCCGCAGGCGCAGGCGCAGGGGCACAAGGTGGTGAGCCTGGCGCAGCTGCACA ACAAGCGGCCGCCGGCGTCGACGGGGCTCCGCCTCGACTTCGACGACGGCGGGTCGGAGC ACGTGTCGACGACGACCACCTCCTCCGCGTCGTCTCTCCTCTCCGACGAGCTCGCCACGC AGTTCGACCGGTGCAAGAACGAGATGGCGCGTATGTTCCAGGATCATACGGAGAGGCTGC GCCGCGCGCTGGGCGAGGTGAGGCGGCGGCACTACCGGTCGCTGCTCGGCGCGGCGGAGG CGGCGGCGGCGCGCCGGATGAGGGAGAAGGAGGCGGAGGCCTCGAATGCGGCGCGGCGCG GCGCCGAGCTGGAGGAGCGCGTCGCGCGGCTGCGGGCGGAGGCGGCGGCGTGGCAGGCGA AGGCGCTCGCCGACCAGTCCACCGCCGCGGCGCTCCACGCGCAGCTCCAGCAGGCGGCGG CGGCCGCGGCGCAGGCGAGGGGCAGCAAGTCGCCGGAGGACGACGACAACATCAACCCCA ACGCCGCCGCCGCGGACGACGCCGAGTCGGGGTTCGTCGACCCGGACAGAGTGGAGGAGG TGACCCCGCCGCCGCCGCCGTCGCGGCCGTGCCGGACGTGCCGGGCGAGGCCGTCCTCCG TCGTCCTCCTCCCCTGCCGCCACCTCTGCGTGTGCGAGGCGTGCGAGCCCGCCGTCTCCA CCGCCATCGCCGCCGCCTGCCCCACGTGCCGCGGCGCGGTCACCGGCACCGTGCAGGTCT TCATCTCGTGAAAAAAAAGAAAACGATTGGTACAGAAATGCCTCGCCTTTTTTTTTTTTT TTTTTGCTCCCCTCCTCCTCGGGACATGCATGGCCATTGAAAGCCAAACTCTGAACAATG AATGAAAAATTGTAAAGTTTTATT