Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os10t0562600-00
CDS Infomation

cds chromosome:IRGSP-1.0:10:22193129:22194080:-1 gene:Os10g0562600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Hypothetical conserved gene. (Os10t0562600-00)
Sequence

ATGATCGGCATGGAGGTGGAGGTGGAGGATGACATGGTGGAGTGGTATCGCTGCGGTGGC
GGCGGGGCGGCGGCGGCGGTGGAGGTGGAGGTGAGGGAGCTGAGGGTGGAGCTGGAGGTG
GAGCGGCGGATGCGGCGGAAGGCGGAGGCGGTGAGCGAGGTGCTCGCCGTGGAGCTGGAG
GAGGAGAGGCGGCGGCGCGGGGCGGCGGAGGCGGAGTGCAGGAGGATGCGCGGGGAGGTG
GGCGAGATGCGCGCGGAGGTGGAGCGCGCGCTGGAGGAGGTCGACGACGAGCGCCGGATG
CTGCGCGTCGCCGAGCTCTGGCGGGAGGAGCGCGTCCAGATGAAGCTCGCCGACGCCAAG
GCCGCCATGGAGGAGGCGCTGCGGGAGATCGCCGCCGCCTCCGCCGCCACCGCCATCGCC
GACGACGACAACAGCAGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCAGTCCGACG
ACCACCAGCAAGTCAAGCCCCACGAGCCAGCAGATCAGCCAGGCGACGAGCGGCGGCCAG
CCTCAGCTGCAGCACCGGCGAGAGGTCGCCGGCGGCGGCGAGAACCCGCACATCGCGAGG
GGGATCAAGGGGTTCGTGGAGTTCCCGAGGGCGGTGCGCGTGCGGCTGCCGCGGGAGGAG
AGGGTGGATCTCGTCTCCAACCTCGAGTGCCAGCGCGCGCAGCTGCGCACCCTCTCCCGC
CACCGCAACCCTCCCGCCGGCGTCGGCCTCGCCGCCGCCGCCGCCGCCGCCTCCCATAAC
CTCGTCCTGTAA

Peptide Sequence

PEP ID

Os10t0562600-00
PEP Infomation

pep chromosome:IRGSP-1.0:10:22193129:22194080:-1 gene:Os10g0562600 transcript:Os10t0562600-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Hypothetical conserved gene. (Os10t0562600-00)
Sequence

MIGMEVEVEDDMVEWYRCGGGGAAAAVEVEVRELRVELEVERRMRRKAEAVSEVLAVELE
EERRRRGAAEAECRRMRGEVGEMRAEVERALEEVDDERRMLRVAELWREERVQMKLADAK
AAMEEALREIAAASAATAIADDDNSSGGGGGGGGGGGSPTTTSKSSPTSQQISQATSGGQ
PQLQHRREVAGGGENPHIARGIKGFVEFPRAVRVRLPREERVDLVSNLECQRAQLRTLSR
HRNPPAGVGLAAAAAAASHNLVL

Transcript Sequence

Transcript ID

Os10t0562600-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:10:22193129:22194080:-1 gene:Os10g0562600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Hypothetical conserved gene. (Os10t0562600-00)
Sequence

GTGGTGGTGGTGGTGGTGGCGGTGGCGGAGACAAGCCCCAGGAATCTTCCCCCTCCGCGC
CCCAATCATGGCGCACTACCACTAGCTTTGTCGATCACAAGCCCTCCCTACTTGTTGCCG
CGCCGCCACGCCTCCTCGAGCGCTTCGTCTCGGCATCCTATGATCGGCATGGAGGTGGAG
GTGGAGGATGACATGGTGGAGTGGTATCGCTGCGGTGGCGGCGGGGCGGCGGCGGCGGTG
GAGGTGGAGGTGAGGGAGCTGAGGGTGGAGCTGGAGGTGGAGCGGCGGATGCGGCGGAAG
GCGGAGGCGGTGAGCGAGGTGCTCGCCGTGGAGCTGGAGGAGGAGAGGCGGCGGCGCGGG
GCGGCGGAGGCGGAGTGCAGGAGGATGCGCGGGGAGGTGGGCGAGATGCGCGCGGAGGTG
GAGCGCGCGCTGGAGGAGGTCGACGACGAGCGCCGGATGCTGCGCGTCGCCGAGCTCTGG
CGGGAGGAGCGCGTCCAGATGAAGCTCGCCGACGCCAAGGCCGCCATGGAGGAGGCGCTG
CGGGAGATCGCCGCCGCCTCCGCCGCCACCGCCATCGCCGACGACGACAACAGCAGCGGC
GGCGGCGGCGGCGGCGGCGGCGGCGGCGGCAGTCCGACGACCACCAGCAAGTCAAGCCCC
ACGAGCCAGCAGATCAGCCAGGCGACGAGCGGCGGCCAGCCTCAGCTGCAGCACCGGCGA
GAGGTCGCCGGCGGCGGCGAGAACCCGCACATCGCGAGGGGGATCAAGGGGTTCGTGGAG
TTCCCGAGGGCGGTGCGCGTGCGGCTGCCGCGGGAGGAGAGGGTGGATCTCGTCTCCAAC
CTCGAGTGCCAGCGCGCGCAGCTGCGCACCCTCTCCCGCCACCGCAACCCTCCCGCCGGC
GTCGGCCTCGCCGCCGCCGCCGCCGCCGCCTCCCATAACCTCGTCCTGTAAC