Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os10t0562000-01
CDS Infomation	cds chromosome:IRGSP-1.0:10:22166888:22168691:-1 gene:Os10g0562000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to glycoprotein. (Os10t0562000-01)
Sequence	ATGGCGGTGGCGCAGGCGTCGCTGCTGCAGAGCTTCCCGTTCAGGGCGGCGGTGTTCGCG GCGTGCGTACTGCTGCTCCCCCTCGTGCCGTCGCCGCAGGCGCCGGCGGCGGGGGGAGAT GGTGGCGGCGGCGGCGGCCGTGGGGAGGCGTTTCTTGCCAAGGTGTGGGAGCTGCTCCAC CTGCTCGTCGTCGGGATCGCCGTGTCGTACGGGCTGTTCAGCCGCCGGAACAACGCCGGG AGGCGGGGCGACGAGAAGGATGCCGCGGCGCAGGCGAAGGCGGACTCCGCCGGGTACGTG TCGCAGATGATCCACGACTCGCTGGTGTTCGACGACGGTGGCGGCGACGTGGCGCTCGAC AGCCCGGGTGGCAACAGGGTGCGGTCGTGGAGCGCGATGCACCACCCCGACGAGCCTGTG GTGGTGGTGGCGACCGGCGGCGCAGGAGGCGGCCGGAGCCACGCCGTGGAGGCGGCGCAG CAGGCGCCGCCGCTGTCGCTGCCCGTAAGAACACTGAAGCCGCAGGGCGAGTCGTCCTCC AGCGCGGGCTACGGCGACGGCGGCGAGCCGTGGGCGGCGCGGCCGCGCAGGATCTCACAG GACACGCCCGGCGGAGGCGGCGGCGGCCATGAAACCGTGCTCCCTTCGCCGATCCCGTGG CGGTCACGGTCGGGGAGGTTCGACGCGTCGGCGCCGAGCCCCCCTTCGCCGTCGCCGAAG AGGCTCTCCCCGGCGTCGTCCCTGTCCAAGGAGACACTAGCCAAGGCCAGTGAGGACTAC TCCTCCAGGCGGAGGAGCCCGTACAAGTCATCCCCACCGGCGCCGCCTCCGCCGCCACCT CCGTTCCTCGTCCACGGCTACCATCCGCCGGCGGCCGAACGCCGCACGGCGGCGAAGAGC TTCAAGGAGGAGCTGCAGGAGCAAACCTCCCACAGCTTCACTACCTCCGAATTCAGCCGT AGCAGCAGCAACTCCTCGTCGGCGAAGCCAAGAATCTCCATAGATAGCTCCTCCTCCTCC TCGTCGTACTACCCAGTTGCCAAATCGGTGAGAACAATCAGAGGAGGAAGAGAATCACTC CAGAGCCAGAGCCAAGAACAACCCGACGTCGCCGTCGCCGGCGACGCGCCGGCTCTTCTT CACGGATCGGATTCAGACGATCCGTACGGTGGCTACAGGGCGTACCAATCCATTCCCAGG TTCCAGTACGAGAGAGGCAGCAGCGACCCCATCCTGGGCAACGTGACGGTGTCCTCGGAG AGCAGCGACGACGACGACAGCGACGTCGACGGCGACGGCGAGCTCTCGACGAGGGGGAAC TCGCCGAGGAGGGAGTCGTCGCCGGAGGTGGACGAGAACGAGGTGGACAAGAAGGCGGAG GAGTTCATCGCCAGGTTCAGGGAGCAGATCAGGCTGCAGAGAATCGAGTCGATAAAGAAA TCCGCGGGGCCGCGTGGTGTCAAGCACGGCAAGTAG

Peptide Sequence

PEP ID	Os10t0562000-01
PEP Infomation	pep chromosome:IRGSP-1.0:10:22166888:22168691:-1 gene:Os10g0562000 transcript:Os10t0562000-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to glycoprotein. (Os10t0562000-01)
Sequence	MAVAQASLLQSFPFRAAVFAACVLLLPLVPSPQAPAAGGDGGGGGGRGEAFLAKVWELLH LLVVGIAVSYGLFSRRNNAGRRGDEKDAAAQAKADSAGYVSQMIHDSLVFDDGGGDVALD SPGGNRVRSWSAMHHPDEPVVVVATGGAGGGRSHAVEAAQQAPPLSLPVRTLKPQGESSS SAGYGDGGEPWAARPRRISQDTPGGGGGGHETVLPSPIPWRSRSGRFDASAPSPPSPSPK RLSPASSLSKETLAKASEDYSSRRRSPYKSSPPAPPPPPPPFLVHGYHPPAAERRTAAKS FKEELQEQTSHSFTTSEFSRSSSNSSSAKPRISIDSSSSSSSYYPVAKSVRTIRGGRESL QSQSQEQPDVAVAGDAPALLHGSDSDDPYGGYRAYQSIPRFQYERGSSDPILGNVTVSSE SSDDDDSDVDGDGELSTRGNSPRRESSPEVDENEVDKKAEEFIARFREQIRLQRIESIKK SAGPRGVKHGK

Transcript Sequence

Transcript ID	Os10t0562000-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:10:22166888:22168691:-1 gene:Os10g0562000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to glycoprotein. (Os10t0562000-01)
Sequence	AGCAAAAGCAGCTTAAAAACAGCGTCGTCACGCTGCCTCCCGCTTCCCCCTCTTCGTCTT CTTCTTCTTCCTCCAATGGCGGTGGCGCAGGCGTCGCTGCTGCAGAGCTTCCCGTTCAGG GCGGCGGTGTTCGCGGCGTGCGTACTGCTGCTCCCCCTCGTGCCGTCGCCGCAGGCGCCG GCGGCGGGGGGAGATGGTGGCGGCGGCGGCGGCCGTGGGGAGGCGTTTCTTGCCAAGGTG TGGGAGCTGCTCCACCTGCTCGTCGTCGGGATCGCCGTGTCGTACGGGCTGTTCAGCCGC CGGAACAACGCCGGGAGGCGGGGCGACGAGAAGGATGCCGCGGCGCAGGCGAAGGCGGAC TCCGCCGGGTACGTGTCGCAGATGATCCACGACTCGCTGGTGTTCGACGACGGTGGCGGC GACGTGGCGCTCGACAGCCCGGGTGGCAACAGGGTGCGGTCGTGGAGCGCGATGCACCAC CCCGACGAGCCTGTGGTGGTGGTGGCGACCGGCGGCGCAGGAGGCGGCCGGAGCCACGCC GTGGAGGCGGCGCAGCAGGCGCCGCCGCTGTCGCTGCCCGTAAGAACACTGAAGCCGCAG GGCGAGTCGTCCTCCAGCGCGGGCTACGGCGACGGCGGCGAGCCGTGGGCGGCGCGGCCG CGCAGGATCTCACAGGACACGCCCGGCGGAGGCGGCGGCGGCCATGAAACCGTGCTCCCT TCGCCGATCCCGTGGCGGTCACGGTCGGGGAGGTTCGACGCGTCGGCGCCGAGCCCCCCT TCGCCGTCGCCGAAGAGGCTCTCCCCGGCGTCGTCCCTGTCCAAGGAGACACTAGCCAAG GCCAGTGAGGACTACTCCTCCAGGCGGAGGAGCCCGTACAAGTCATCCCCACCGGCGCCG CCTCCGCCGCCACCTCCGTTCCTCGTCCACGGCTACCATCCGCCGGCGGCCGAACGCCGC ACGGCGGCGAAGAGCTTCAAGGAGGAGCTGCAGGAGCAAACCTCCCACAGCTTCACTACC TCCGAATTCAGCCGTAGCAGCAGCAACTCCTCGTCGGCGAAGCCAAGAATCTCCATAGAT AGCTCCTCCTCCTCCTCGTCGTACTACCCAGTTGCCAAATCGGTGAGAACAATCAGAGGA GGAAGAGAATCACTCCAGAGCCAGAGCCAAGAACAACCCGACGTCGCCGTCGCCGGCGAC GCGCCGGCTCTTCTTCACGGATCGGATTCAGACGATCCGTACGGTGGCTACAGGGCGTAC CAATCCATTCCCAGGTTCCAGTACGAGAGAGGCAGCAGCGACCCCATCCTGGGCAACGTG ACGGTGTCCTCGGAGAGCAGCGACGACGACGACAGCGACGTCGACGGCGACGGCGAGCTC TCGACGAGGGGGAACTCGCCGAGGAGGGAGTCGTCGCCGGAGGTGGACGAGAACGAGGTG GACAAGAAGGCGGAGGAGTTCATCGCCAGGTTCAGGGAGCAGATCAGGCTGCAGAGAATC GAGTCGATAAAGAAATCCGCGGGGCCGCGTGGTGTCAAGCACGGCAAGTAGCTCGCCCGC CGCCCGCCGCCGGCGATCACCGGCGCCACTTTTTTACTTTTTTTTTTGTTCTCGTTTTGA GCAGAGATAGATAGTACGGTACTATTTGTATTTGTGATAGCTAATTAGTAGTTATCAAGA ACCACCTGTAAACAAATTACATTCATGTAGATGATGAATGAGAGTGAGTGCATGTTCATG CTCAATTTCTGGGCAAGGAGATCGACTGTTGCATCTGGCAATCAAACTGGATATCTGTTC CATT